FFCP PHASE1:Mm9::chr16:48772215..48772256,-: Difference between revisions
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{{FFCP|EntrezGene=77647|HGNC=|MCL_coexpression_id=4|UniProt=Q3UU67|association_with_transcript=0bp_to_ENSMUST00000071647,ENSMUST00000099715_5end|description=CAGE_peak_4_at_Trat1_5end|id=chr16:48772215..48772256,-|ontology_enrichment_celltype=CL:0000084!1.58e-17!11;CL:0000827!1.58e-17!11;CL:0000838!8.00e-16!12;CL:0000791!6.96e-15!9;CL:0000789!6.96e-15!9;CL:0002420!6.96e-15!9;CL:0002419!6.96e-15!9;CL:0000790!6.96e-15!9;CL:0000542!2.21e-14!13;CL:0000051!2.21e-14!13;CL:0000624!1.64e-13!8;CL:0000893!1.61e-10!6;CL:0002489!1.61e-10!6;CL:0000898!1.61e-10!6;CL:0000809!1.61e-10!6;CL:0000810!1.61e-10!6;CL:0000895!1.61e-10!6;CL:0000808!1.61e-10!6;CL:0000894!1.61e-10!6;CL:0000806!1.61e-10!6;CL:0000807!1.61e-10!6;CL:0000805!1.61e-10!6;CL:0002425!1.61e-10!6;CL:0002436!1.61e-10!6;CL:0002427!1.61e-10!6;CL:0002428!1.61e-10!6;CL:0002429!1.61e-10!6;CL:0002433!1.61e-10!6;CL:0002431!1.61e-10!6;CL:0002432!1.61e-10!6;CL:0000738!2.51e-10!17;CL:0002087!2.51e-10!17;CL:0002031!8.32e-09!25|ontology_enrichment_celltype_v019_2=CL:0000791,5.29e-31,9;CL:0000789,5.29e-31,9;CL:0002420,5.29e-31,9;CL:0002419,5.29e-31,9;CL:0000790,5.29e-31,9;CL:0000624,5.84e-28,8;CL:0000084,3.90e-25,11;CL:0000827,3.90e-25,11;CL:0000838,6.20e-23,12;CL:0000893,2.46e-21,6;CL:0002489,2.46e-21,6;CL:0000898,2.46e-21,6;CL:0000809,2.46e-21,6;CL:0000810,2.46e-21,6;CL:0000895,2.46e-21,6;CL:0000808,2.46e-21,6;CL:0000894,2.46e-21,6;CL:0000806,2.46e-21,6;CL:0000807,2.46e-21,6;CL:0000805,2.46e-21,6;CL:0002425,2.46e-21,6;CL:0002436,2.46e-21,6;CL:0002427,2.46e-21,6;CL:0002428,2.46e-21,6;CL:0002429,2.46e-21,6;CL:0002433,2.46e-21,6;CL:0002431,2.46e-21,6;CL:0002432,2.46e-21,6;CL:0000542,4.53e-21,13;CL:0000051,4.53e-21,13;CL:0000738,8.38e-16,17;CL:0002087,8.38e-16,17;CL:0002031,2.57e-10,25;CL:0000988,9.12e-08,32;CL:0002032,9.12e-08,32;CL:0000037,9.12e-08,32;CL:0000837,9.12e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.57e-25!23;UBERON:0000974!1.57e-25!23;UBERON:0004807!1.57e-25!23;UBERON:0005058!1.57e-25!23;UBERON:0003351!1.57e-25!23;UBERON:0009113!1.57e-25!23;UBERON:0003295!1.57e-25!23;UBERON:0009722!1.57e-25!23;UBERON:0005562!1.57e-25!23;UBERON:0007690!1.57e-25!23;UBERON:0004177!3.99e-25!29;UBERON:0006562!3.25e-24!24;UBERON:0003408!3.25e-24!24;UBERON:0001557!3.25e-24!24;UBERON:0001042!3.25e-24!24;UBERON:0008814!3.25e-24!24;UBERON:0009145!3.25e-24!24;UBERON:0000072!7.35e-21!27;UBERON:0002193!1.78e-18!48;UBERON:0002390!6.81e-17!45;UBERON:0003061!6.81e-17!45;UBERON:0000063!2.09e-16!35;UBERON:0000065!6.57e-16!41;UBERON:0001004!2.25e-15!42;UBERON:0005057!1.83e-11!51;UBERON:0002405!2.47e-10!70;UBERON:0000064!2.09e-09!99;UBERON:0003929!2.02e-07!55;UBERON:0005911!5.78e-07!69;UBERON:0001041!8.49e-07!92;UBERON:0003081!9.18e-07!88;UBERON:0000077!9.94e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.91e-57,23;UBERON:0000974,6.91e-57,23;UBERON:0004807,6.91e-57,23;UBERON:0005058,6.91e-57,23;UBERON:0003351,6.91e-57,23;UBERON:0009113,6.91e-57,23;UBERON:0003295,6.91e-57,23;UBERON:0009722,6.91e-57,23;UBERON:0005562,6.91e-57,23;UBERON:0007690,6.91e-57,23;UBERON:0006562,2.20e-54,24;UBERON:0003408,2.20e-54,24;UBERON:0001557,2.20e-54,24;UBERON:0001042,2.20e-54,24;UBERON:0008814,2.20e-54,24;UBERON:0009145,2.20e-54,24;UBERON:0000072,5.53e-48,27;UBERON:0004177,1.88e-44,29;UBERON:0005057,1.88e-44,29;UBERON:0000077,2.85e-36,35;UBERON:0007811,3.58e-35,36;UBERON:0000065,1.77e-30,41;UBERON:0001004,1.13e-29,42;UBERON:0000153,6.60e-29,43;UBERON:0002193,2.23e-28,48;UBERON:0002405,2.23e-28,48;UBERON:0002390,1.79e-27,45;UBERON:0003061,1.79e-27,45;UBERON:0003929,7.25e-22,55;UBERON:0002368,9.24e-20,60;UBERON:0002530,5.61e-18,65;UBERON:0000949,9.12e-18,72;UBERON:0000490,1.18e-17,66;UBERON:0005911,9.78e-17,69;UBERON:0001041,5.86e-14,80;UBERON:0003081,1.48e-12,87;UBERON:0004921,9.57e-09,114;UBERON:0001007,1.56e-08,116;UBERON:0001555,1.56e-08,116;UBERON:0007026,1.56e-08,116;UBERON:0004119,2.50e-08,118;UBERON:0000925,2.50e-08,118;UBERON:0006595,2.50e-08,118;UBERON:0000926,3.95e-08,120;UBERON:0004120,3.95e-08,120;UBERON:0006603,3.95e-08,120;UBERON:0001048,6.60e-07,134|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,1.40788722151667,1.87251621057595,3.76679530096111,2.55270908785077,5.9920255475922,5.76974655965383,0,0,0,0.473193248037357,0.685572168028694,0,0.255129870453209,0.794327609607082,0.522399578277871,0,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.0603129249281559,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0084225838708,0,1.95150818613172,2.85825810551149,5.90788095702689,11.9208812868759,7.81270421879797,10.6336459565696,10.9043765943999,13.031363938005,13.0065778826524,12.4746087346883,11.1605736302782,17.0640277185091,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0|short_description=p4@Trat1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77647 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UU67 | |||
|association_with_transcript=0bp_to_ENSMUST00000071647,ENSMUST00000099715_5end | |||
|cluster_id=chr16:48772215..48772256,- | |||
|description=CAGE_peak_4_at_Trat1_5end | |||
|id=chr16:48772215..48772256,- | |||
|ontology_enrichment_celltype=CL:0000084!1.58e-17!11;CL:0000827!1.58e-17!11;CL:0000838!8.00e-16!12;CL:0000791!6.96e-15!9;CL:0000789!6.96e-15!9;CL:0002420!6.96e-15!9;CL:0002419!6.96e-15!9;CL:0000790!6.96e-15!9;CL:0000542!2.21e-14!13;CL:0000051!2.21e-14!13;CL:0000624!1.64e-13!8;CL:0000893!1.61e-10!6;CL:0002489!1.61e-10!6;CL:0000898!1.61e-10!6;CL:0000809!1.61e-10!6;CL:0000810!1.61e-10!6;CL:0000895!1.61e-10!6;CL:0000808!1.61e-10!6;CL:0000894!1.61e-10!6;CL:0000806!1.61e-10!6;CL:0000807!1.61e-10!6;CL:0000805!1.61e-10!6;CL:0002425!1.61e-10!6;CL:0002436!1.61e-10!6;CL:0002427!1.61e-10!6;CL:0002428!1.61e-10!6;CL:0002429!1.61e-10!6;CL:0002433!1.61e-10!6;CL:0002431!1.61e-10!6;CL:0002432!1.61e-10!6;CL:0000738!2.51e-10!17;CL:0002087!2.51e-10!17;CL:0002031!8.32e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.29e-31,9;CL:0000789,5.29e-31,9;CL:0002420,5.29e-31,9;CL:0002419,5.29e-31,9;CL:0000790,5.29e-31,9;CL:0000624,5.84e-28,8;CL:0000084,3.90e-25,11;CL:0000827,3.90e-25,11;CL:0000838,6.20e-23,12;CL:0000893,2.46e-21,6;CL:0002489,2.46e-21,6;CL:0000898,2.46e-21,6;CL:0000809,2.46e-21,6;CL:0000810,2.46e-21,6;CL:0000895,2.46e-21,6;CL:0000808,2.46e-21,6;CL:0000894,2.46e-21,6;CL:0000806,2.46e-21,6;CL:0000807,2.46e-21,6;CL:0000805,2.46e-21,6;CL:0002425,2.46e-21,6;CL:0002436,2.46e-21,6;CL:0002427,2.46e-21,6;CL:0002428,2.46e-21,6;CL:0002429,2.46e-21,6;CL:0002433,2.46e-21,6;CL:0002431,2.46e-21,6;CL:0002432,2.46e-21,6;CL:0000542,4.53e-21,13;CL:0000051,4.53e-21,13;CL:0000738,8.38e-16,17;CL:0002087,8.38e-16,17;CL:0002031,2.57e-10,25;CL:0000988,9.12e-08,32;CL:0002032,9.12e-08,32;CL:0000037,9.12e-08,32;CL:0000837,9.12e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.57e-25!23;UBERON:0000974!1.57e-25!23;UBERON:0004807!1.57e-25!23;UBERON:0005058!1.57e-25!23;UBERON:0003351!1.57e-25!23;UBERON:0009113!1.57e-25!23;UBERON:0003295!1.57e-25!23;UBERON:0009722!1.57e-25!23;UBERON:0005562!1.57e-25!23;UBERON:0007690!1.57e-25!23;UBERON:0004177!3.99e-25!29;UBERON:0006562!3.25e-24!24;UBERON:0003408!3.25e-24!24;UBERON:0001557!3.25e-24!24;UBERON:0001042!3.25e-24!24;UBERON:0008814!3.25e-24!24;UBERON:0009145!3.25e-24!24;UBERON:0000072!7.35e-21!27;UBERON:0002193!1.78e-18!48;UBERON:0002390!6.81e-17!45;UBERON:0003061!6.81e-17!45;UBERON:0000063!2.09e-16!35;UBERON:0000065!6.57e-16!41;UBERON:0001004!2.25e-15!42;UBERON:0005057!1.83e-11!51;UBERON:0002405!2.47e-10!70;UBERON:0000064!2.09e-09!99;UBERON:0003929!2.02e-07!55;UBERON:0005911!5.78e-07!69;UBERON:0001041!8.49e-07!92;UBERON:0003081!9.18e-07!88;UBERON:0000077!9.94e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.91e-57,23;UBERON:0000974,6.91e-57,23;UBERON:0004807,6.91e-57,23;UBERON:0005058,6.91e-57,23;UBERON:0003351,6.91e-57,23;UBERON:0009113,6.91e-57,23;UBERON:0003295,6.91e-57,23;UBERON:0009722,6.91e-57,23;UBERON:0005562,6.91e-57,23;UBERON:0007690,6.91e-57,23;UBERON:0006562,2.20e-54,24;UBERON:0003408,2.20e-54,24;UBERON:0001557,2.20e-54,24;UBERON:0001042,2.20e-54,24;UBERON:0008814,2.20e-54,24;UBERON:0009145,2.20e-54,24;UBERON:0000072,5.53e-48,27;UBERON:0004177,1.88e-44,29;UBERON:0005057,1.88e-44,29;UBERON:0000077,2.85e-36,35;UBERON:0007811,3.58e-35,36;UBERON:0000065,1.77e-30,41;UBERON:0001004,1.13e-29,42;UBERON:0000153,6.60e-29,43;UBERON:0002193,2.23e-28,48;UBERON:0002405,2.23e-28,48;UBERON:0002390,1.79e-27,45;UBERON:0003061,1.79e-27,45;UBERON:0003929,7.25e-22,55;UBERON:0002368,9.24e-20,60;UBERON:0002530,5.61e-18,65;UBERON:0000949,9.12e-18,72;UBERON:0000490,1.18e-17,66;UBERON:0005911,9.78e-17,69;UBERON:0001041,5.86e-14,80;UBERON:0003081,1.48e-12,87;UBERON:0004921,9.57e-09,114;UBERON:0001007,1.56e-08,116;UBERON:0001555,1.56e-08,116;UBERON:0007026,1.56e-08,116;UBERON:0004119,2.50e-08,118;UBERON:0000925,2.50e-08,118;UBERON:0006595,2.50e-08,118;UBERON:0000926,3.95e-08,120;UBERON:0004120,3.95e-08,120;UBERON:0006603,3.95e-08,120;UBERON:0001048,6.60e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,2.58246646883153,1.40788722151667,1.87251621057595,3.76679530096111,2.55270908785077,5.9920255475922,5.76974655965383,0,0,0,0.473193248037357,0.685572168028694,0,0.255129870453209,0.794327609607082,0.522399578277871,0,0.22940928106717,0,0,0,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.991256348951394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.0603129249281559,0,0.164140899745061,0,0,0.170870880797853,0,0,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0084225838708,0,1.95150818613172,2.85825810551149,5.90788095702689,11.9208812868759,7.81270421879797,10.6336459565696,10.9043765943999,13.031363938005,13.0065778826524,12.4746087346883,11.1605736302782,17.0640277185091,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p4@Trat1 | |||
}} |
Latest revision as of 14:53, 25 September 2015
Short description: | p4@Trat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_ENSMUST00000071647, ENSMUST00000099715_5end |
EntrezGene: | Trat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data