FFCP PHASE1:Hg19::chr6:17600576..17600642,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16372 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBU6,B4DK49 | |||
|association_with_transcript=0bp_to_ENST00000259963,ENST00000542476_5end | |||
|cluster_id=chr6:17600576..17600642,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_FAM8A1_5end | |||
|id=chr6:17600576..17600642,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.58e-07!18;CL:0000789!5.58e-07!18;CL:0002420!5.58e-07!18;CL:0002419!5.58e-07!18;CL:0000790!5.58e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.58e-07;18!CL:0000789;5.58e-07;18!CL:0002419;5.58e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.58e-07,18;CL:0000789,5.58e-07,18;CL:0002420,5.58e-07,18;CL:0002419,5.58e-07,18;CL:0000790,5.58e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;5.58e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.40e-37!115;UBERON:0001049!8.39e-14!57;UBERON:0005068!8.39e-14!57;UBERON:0006241!8.39e-14!57;UBERON:0007135!8.39e-14!57;UBERON:0003080!2.95e-12!42;UBERON:0002780!4.11e-12!41;UBERON:0001890!4.11e-12!41;UBERON:0006240!4.11e-12!41;UBERON:0002616!1.24e-11!59;UBERON:0000955!3.13e-10!69;UBERON:0006238!3.13e-10!69;UBERON:0002020!4.05e-10!34;UBERON:0003528!4.05e-10!34;UBERON:0002619!1.19e-09!22;UBERON:0001893!1.42e-09!34;UBERON:0001017!1.48e-09!82;UBERON:0002791!2.54e-09!33;UBERON:0001869!3.84e-09!32;UBERON:0001950!1.03e-08!20;UBERON:0000073!1.26e-08!94;UBERON:0001016!1.26e-08!94;UBERON:0005743!1.40e-08!86;UBERON:0000178!5.74e-07!15;UBERON:0000179!5.74e-07!15;UBERON:0000463!5.74e-07!15;UBERON:0000956!8.11e-07!25;UBERON:0000203!8.11e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.32e-10;114!UBERON:0002619;1.19e-09;22!UBERON:0002780;3.56e-09;41!UBERON:0001890;3.56e-09;41!UBERON:0001950;1.04e-08;20!UBERON:0003528;1.62e-08;34!UBERON:0002020;1.62e-08;34!UBERON:0002791;1.98e-08;32!UBERON:0001869;3.38e-08;32!UBERON:0000073;3.70e-08;53!UBERON:0002616;3.70e-08;53!UBERON:0001893;4.88e-08;34!UBERON:0000178;6.16e-07;15!UBERON:0000179;6.16e-07;15!UBERON:0000463;6.16e-07;15!UBERON:0000956;7.63e-07;25!UBERON:0000203;7.63e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.19e-36,114;UBERON:0001049,1.20e-13,56;UBERON:0005068,1.20e-13,56;UBERON:0006241,1.20e-13,56;UBERON:0007135,1.20e-13,56;UBERON:0000073,5.06e-13,53;UBERON:0002616,5.06e-13,53;UBERON:0002780,4.11e-12,41;UBERON:0001890,4.11e-12,41;UBERON:0003080,4.11e-12,41;UBERON:0006240,4.11e-12,41;UBERON:0003528,4.05e-10,34;UBERON:0002020,4.05e-10,34;UBERON:0000955,4.51e-10,68;UBERON:0006238,4.51e-10,68;UBERON:0002619,1.19e-09,22;UBERON:0001893,1.42e-09,34;UBERON:0001017,2.11e-09,81;UBERON:0001016,2.17e-09,89;UBERON:0011216,2.17e-09,223;UBERON:0002791,2.52e-09,32;UBERON:0001869,3.84e-09,32;UBERON:0001950,1.03e-08,20;UBERON:0000178,5.74e-07,15;UBERON:0000179,5.74e-07,15;UBERON:0000463,5.74e-07,15;UBERON:0000956,8.11e-07,25;UBERON:0000203,8.11e-07,25 | |||
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| |||
|short_description=p1@FAM8A1 | |||
}} |
Latest revision as of 00:52, 17 September 2015
Short description: | p1@FAM8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM8A1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000259963, ENST00000542476_5end |
EntrezGene: | FAM8A1 |
HGNC: | 16372 |
UniProt: | Q9UBU6B4DK49 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.58e-07 | 18 |
alpha-beta T cell | 5.58e-07 | 18 |
immature T cell | 5.58e-07 | 18 |
mature T cell | 5.58e-07 | 18 |
immature alpha-beta T cell | 5.58e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.19e-36 | 114 |
neural tube | 1.20e-13 | 56 |
neural rod | 1.20e-13 | 56 |
future spinal cord | 1.20e-13 | 56 |
neural keel | 1.20e-13 | 56 |
regional part of nervous system | 5.06e-13 | 53 |
regional part of brain | 5.06e-13 | 53 |
regional part of forebrain | 4.11e-12 | 41 |
forebrain | 4.11e-12 | 41 |
anterior neural tube | 4.11e-12 | 41 |
future forebrain | 4.11e-12 | 41 |
brain grey matter | 4.05e-10 | 34 |
gray matter | 4.05e-10 | 34 |
brain | 4.51e-10 | 68 |
future brain | 4.51e-10 | 68 |
regional part of cerebral cortex | 1.19e-09 | 22 |
telencephalon | 1.42e-09 | 34 |
central nervous system | 2.11e-09 | 81 |
nervous system | 2.17e-09 | 89 |
organ system subdivision | 2.17e-09 | 223 |
regional part of telencephalon | 2.52e-09 | 32 |
cerebral hemisphere | 3.84e-09 | 32 |
neocortex | 1.03e-08 | 20 |
blood | 5.74e-07 | 15 |
haemolymphatic fluid | 5.74e-07 | 15 |
organism substance | 5.74e-07 | 15 |
cerebral cortex | 8.11e-07 | 25 |
pallium | 8.11e-07 | 25 |