FFCP PHASE1:Hg19::chrX:80370650..80370666,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:80370650..80370666,-
|short_description=p@chrX:80370650..80370666,-
|description=CAGE_peak_at_chrX:80370650..80370666,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:80370650..80370666,- | |||
|coexpression_cluster_id=C1098 | |||
|description=CAGE_peak_at_chrX:80370650..80370666,- | |||
|id=chrX:80370650..80370666,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.24e-16!51;DOID:0060083!2.24e-16!51;DOID:1240!6.50e-14!39;DOID:162!3.78e-13!235;DOID:14566!7.58e-13!239;DOID:8692!2.03e-11!31;DOID:0050686!1.97e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.56e-13;39!DOID:2531;1.96e-12;51!DOID:0060083;1.96e-12;51!DOID:8692;3.86e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.98e-19,51;DOID:0060083,2.98e-19,51;DOID:1240,3.45e-16,39;DOID:162,1.57e-10,235;DOID:14566,4.73e-10,239;DOID:8692,1.88e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.55e-12!57;UBERON:0005068!3.55e-12!57;UBERON:0006241!3.55e-12!57;UBERON:0007135!3.55e-12!57;UBERON:0003080!5.72e-12!42;UBERON:0002780!1.44e-11!41;UBERON:0001890!1.44e-11!41;UBERON:0006240!1.44e-11!41;UBERON:0001017!1.04e-10!82;UBERON:0005743!2.28e-10!86;UBERON:0000073!3.63e-10!94;UBERON:0001016!3.63e-10!94;UBERON:0002346!1.22e-09!90;UBERON:0002616!2.16e-09!59;UBERON:0002020!4.83e-09!34;UBERON:0003528!4.83e-09!34;UBERON:0007023!8.40e-09!115;UBERON:0003075!9.07e-09!86;UBERON:0007284!9.07e-09!86;UBERON:0003056!2.71e-08!61;UBERON:0000955!3.17e-08!69;UBERON:0006238!3.17e-08!69;UBERON:0001893!3.95e-08!34;UBERON:0002791!4.07e-08!33;UBERON:0001869!1.46e-07!32;UBERON:0001737!9.07e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.03e-10;9!UBERON:0001557;2.03e-10;9!UBERON:0002780;1.16e-09;41!UBERON:0001890;1.16e-09;41!UBERON:0003296;2.49e-09;4!UBERON:0010133;2.49e-09;4!UBERON:0003528;6.87e-08;34!UBERON:0002020;6.87e-08;34!UBERON:0001894;1.04e-07;7!UBERON:0000125;1.73e-07;9!UBERON:0002308;1.73e-07;9!UBERON:0000073;1.87e-07;53!UBERON:0002616;1.87e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.12e-13,56;UBERON:0005068,4.12e-13,56;UBERON:0006241,4.12e-13,56;UBERON:0007135,4.12e-13,56;UBERON:0002780,1.69e-11,41;UBERON:0001890,1.69e-11,41;UBERON:0003080,1.69e-11,41;UBERON:0006240,1.69e-11,41;UBERON:0000073,2.38e-11,53;UBERON:0002616,2.38e-11,53;UBERON:0002346,4.97e-11,86;UBERON:0001737,3.62e-10,9;UBERON:0001017,7.38e-10,81;UBERON:0003528,1.93e-09,34;UBERON:0002020,1.93e-09,34;UBERON:0003296,2.61e-09,4;UBERON:0010133,2.61e-09,4;UBERON:0001016,3.24e-09,89;UBERON:0003075,5.36e-09,82;UBERON:0007284,5.36e-09,82;UBERON:0003056,2.57e-08,61;UBERON:0001894,7.30e-08,7;UBERON:0006222,7.30e-08,7;UBERON:0000955,1.38e-07,68;UBERON:0006238,1.38e-07,68;UBERON:0002791,1.66e-07,32;UBERON:0000125,1.99e-07,9;UBERON:0002308,1.99e-07,9;UBERON:0010371,3.15e-07,104;UBERON:0001893,6.44e-07,34;UBERON:0007023,7.34e-07,114 | |||
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| ||
|short_description=p@chrX:80370650..80370666,- | |||
}} | }} |
Latest revision as of 09:44, 1 August 2015
Short description: | p@chrX:80370650..80370666, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:80370650..80370666, - |
Coexpression cluster: | C1098_acute_teratocarcinoma_myelodysplastic_colon_adult_Mast_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.12e-13 | 56 |
neural rod | 4.12e-13 | 56 |
future spinal cord | 4.12e-13 | 56 |
neural keel | 4.12e-13 | 56 |
regional part of forebrain | 1.69e-11 | 41 |
forebrain | 1.69e-11 | 41 |
anterior neural tube | 1.69e-11 | 41 |
future forebrain | 1.69e-11 | 41 |
regional part of nervous system | 2.38e-11 | 53 |
regional part of brain | 2.38e-11 | 53 |
neurectoderm | 4.97e-11 | 86 |
larynx | 3.62e-10 | 9 |
central nervous system | 7.38e-10 | 81 |
brain grey matter | 1.93e-09 | 34 |
gray matter | 1.93e-09 | 34 |
gland of diencephalon | 2.61e-09 | 4 |
neuroendocrine gland | 2.61e-09 | 4 |
nervous system | 3.24e-09 | 89 |
neural plate | 5.36e-09 | 82 |
presumptive neural plate | 5.36e-09 | 82 |
pre-chordal neural plate | 2.57e-08 | 61 |
diencephalon | 7.30e-08 | 7 |
future diencephalon | 7.30e-08 | 7 |
brain | 1.38e-07 | 68 |
future brain | 1.38e-07 | 68 |
regional part of telencephalon | 1.66e-07 | 32 |
neural nucleus | 1.99e-07 | 9 |
nucleus of brain | 1.99e-07 | 9 |
ecto-epithelium | 3.15e-07 | 104 |
telencephalon | 6.44e-07 | 34 |
adult organism | 7.34e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.98e-19 | 51 |
immune system cancer | 2.98e-19 | 51 |
leukemia | 3.45e-16 | 39 |
cancer | 1.57e-10 | 235 |
disease of cellular proliferation | 4.73e-10 | 239 |
myeloid leukemia | 1.88e-09 | 31 |