FFCP PHASE1:Hg19::chr6:35310813..35310823,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:35310813..35310823,+ | |||
|coexpression_cluster_id=C250 | |||
|description=CAGE_peak_at_chr6:35310813..35310823,+ | |||
|id=chr6:35310813..35310823,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.11e-34!42;CL:0000860!8.55e-34!45;CL:0000766!5.47e-26!76;CL:0000839!4.70e-25!70;CL:0000557!8.66e-25!71;CL:0002009!1.58e-21!65;CL:0002194!3.22e-21!63;CL:0000576!3.22e-21!63;CL:0000040!3.22e-21!63;CL:0000559!3.22e-21!63;CL:0000738!1.24e-18!140;CL:0002031!8.08e-18!124;CL:0002087!6.39e-16!119;CL:0000763!9.57e-15!112;CL:0000049!9.57e-15!112;CL:0000037!2.76e-13!172;CL:0000566!2.76e-13!172;CL:0002032!4.95e-12!165;CL:0000837!4.95e-12!165;CL:0000988!9.09e-12!182;CL:0002393!9.16e-08!9;CL:0002397!9.16e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.93e-35;33!CL:0002057;4.93e-35;33!CL:0000473;1.80e-24;39!CL:0000234;1.80e-24;39!CL:0000576;3.10e-22;48!CL:0000766;1.24e-21;69!CL:0000097;3.36e-14;5!CL:0000763;8.46e-13;100!CL:0000738;3.98e-08;136!CL:0000163;4.25e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.53e-40,42;CL:0002057,6.53e-40,42;CL:0000766,3.50e-39,72;CL:0000557,2.81e-38,67;CL:0000839,7.95e-35,66;CL:0000473,1.50e-34,48;CL:0000234,1.50e-34,48;CL:0002009,1.02e-29,61;CL:0000763,1.01e-27,108;CL:0000049,1.01e-27,108;CL:0002194,4.86e-27,59;CL:0000576,4.86e-27,59;CL:0000040,4.86e-27,59;CL:0000559,4.86e-27,59;CL:0000738,1.57e-23,136;CL:0002031,7.07e-20,120;CL:0000037,2.75e-18,168;CL:0002032,2.48e-17,161;CL:0000837,2.48e-17,161;CL:0000988,3.76e-17,177;CL:0002087,2.21e-14,115;CL:0000097,3.02e-14,5;CL:0002028,3.02e-14,5;CL:0000134,3.18e-08,354;CL:0000163,4.01e-08,9;CL:0002320,5.64e-08,361;CL:0000219,4.22e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.63e-29;42!CL:0000049;3.33e-09;108!UBERON:0005425;2.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.06e-21!86;UBERON:0002371!5.25e-21!80;UBERON:0004765!1.01e-18!101;UBERON:0001434!1.01e-18!101;UBERON:0002390!1.89e-18!102;UBERON:0003061!1.89e-18!102;UBERON:0002193!1.18e-15!112;UBERON:0002405!1.63e-14!115;UBERON:0002204!2.88e-09!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.05e-08;1!UBERON:0001785;2.05e-08;1!UBERON:0002464;2.05e-08;1!UBERON:0004904;2.05e-08;1!UBERON:0001021;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.26e-33,76;UBERON:0001474,1.08e-30,82;UBERON:0002390,5.13e-28,98;UBERON:0003061,5.13e-28,98;UBERON:0004765,1.15e-27,90;UBERON:0002405,1.15e-26,93;UBERON:0002193,4.33e-25,108;UBERON:0001434,1.48e-24,100;UBERON:0002204,2.96e-13,167;UBERON:0003081,1.43e-11,203;UBERON:0000941,1.98e-08,1;UBERON:0001785,1.98e-08,1;UBERON:0002464,1.98e-08,1;UBERON:0004904,1.98e-08,1;UBERON:0001021,1.98e-08,1;UBERON:0003902,1.98e-08,1;UBERON:0005425,1.98e-08,1;UBERON:0002384,1.23e-07,371;UBERON:0000926,6.64e-07,315;UBERON:0004120,6.64e-07,315;UBERON:0006603,6.64e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,1.18009283054671,0.383829398097213,0,0,0,0,0.0774672005803016,0,0.293600439334847,0.553995408531877,2.4065333696417,1.51907609501096,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0.822335776043652,0.619412741790207,0.863077176966451,1.0246428261164,0.945928919554341,0.344745680736619,0,1.35426486594342,0.564727018627814,1.09162460023138,0.449446968890169,0.918251677112708,0.641858054152187,1.91801137739712,1.64925650093358,1.59570926097305,1.70489900213078,0.290209238628584,1.70215567407342,1.24564449799115,1.25624332628372,1.5644487552606,0.868755378820466,1.21079900526674,1.10483290796269,0.632924774881769,0.211255286311942,0.212604299965044,0.209658645508376,1.23561494261145,0.300353785683013,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.589211814949674,0,0.270803863765016,0.384273959177026,0.130059347559878,0,0,0,0.296573126324121,0,0,0,0,0,0.759059076058509,0,0,0,0,0,0,0.473554504088034,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0.504867548488229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.088048434013226,6.01251535068239,2.88239906833923,5.30218220390796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,2.07207756718018,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,2.37285620900479,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.276242966807689,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0.183138929636687,0,0,0.650060246036521,0,0,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0.255679882248303,0,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0.276283915531148,0,0.102268682502155,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0.23056390438806,0.269272933229316,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0,0,0,0.392125068635479,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0.134802265961354,0,0,0.182454789215666,0,0.485560759068186,0,2.41981432097328,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0.146178634172371,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,1.59045937961861,0,0,0,0,0,2.32140586367385,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0.828478110694391,0,0,0.121792598380896,0,0,0.2506898940227,0,0.327872630709804,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0.15543720058278,0,0,0,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0.181848659202559,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0.596748666348824,0.150420656698515,0,0,0.261906694481422,0.49131575253029,0.295712172434091,0.0675375846183947,0.781078098613847,0.206686796501184,0,0,0,0.496211178389294,0.351742488719241,0,0,0,0,0,0,0,0.342976018874837,0.0679697329768317,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0.47775168788705,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,1.91107787795487,0.111855431797792,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0.0771741581079447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| |||
|short_description=p@chr6:35310813..35310823,+ | |||
}} |
Latest revision as of 01:00, 31 July 2015
Short description: | p@chr6:35310813..35310823, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35310813..35310823, + |
Coexpression cluster: | C250_Mast_Neutrophils_CD14_Eosinophils_CD8_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.53e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.53e-40 | 42 |
myeloid leukocyte | 3.50e-39 | 72 |
granulocyte monocyte progenitor cell | 2.81e-38 | 67 |
myeloid lineage restricted progenitor cell | 7.95e-35 | 66 |
defensive cell | 1.50e-34 | 48 |
phagocyte | 1.50e-34 | 48 |
macrophage dendritic cell progenitor | 1.02e-29 | 61 |
myeloid cell | 1.01e-27 | 108 |
common myeloid progenitor | 1.01e-27 | 108 |
monopoietic cell | 4.86e-27 | 59 |
monocyte | 4.86e-27 | 59 |
monoblast | 4.86e-27 | 59 |
promonocyte | 4.86e-27 | 59 |
leukocyte | 1.57e-23 | 136 |
hematopoietic lineage restricted progenitor cell | 7.07e-20 | 120 |
hematopoietic stem cell | 2.75e-18 | 168 |
hematopoietic oligopotent progenitor cell | 2.48e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-17 | 161 |
hematopoietic cell | 3.76e-17 | 177 |
nongranular leukocyte | 2.21e-14 | 115 |
mast cell | 3.02e-14 | 5 |
basophil mast progenitor cell | 3.02e-14 | 5 |
mesenchymal cell | 3.18e-08 | 354 |
endocrine cell | 4.01e-08 | 9 |
connective tissue cell | 5.64e-08 | 361 |
motile cell | 4.22e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.26e-33 | 76 |
bone element | 1.08e-30 | 82 |
hematopoietic system | 5.13e-28 | 98 |
blood island | 5.13e-28 | 98 |
skeletal element | 1.15e-27 | 90 |
immune system | 1.15e-26 | 93 |
hemolymphoid system | 4.33e-25 | 108 |
skeletal system | 1.48e-24 | 100 |
musculoskeletal system | 2.96e-13 | 167 |
lateral plate mesoderm | 1.43e-11 | 203 |
cranial nerve II | 1.98e-08 | 1 |
cranial nerve | 1.98e-08 | 1 |
nerve trunk | 1.98e-08 | 1 |
nerve connecting eye with brain | 1.98e-08 | 1 |
nerve | 1.98e-08 | 1 |
retinal neural layer | 1.98e-08 | 1 |
presumptive neural retina | 1.98e-08 | 1 |
connective tissue | 1.23e-07 | 371 |
mesoderm | 6.64e-07 | 315 |
mesoderm-derived structure | 6.64e-07 | 315 |
presumptive mesoderm | 6.64e-07 | 315 |