FFCP PHASE1:Mm9::chr2:121692654..121692733,+: Difference between revisions
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{{FFCP|EntrezGene=319996|HGNC=|MCL_coexpression_id=361|UniProt=Q6P2L7|association_with_transcript=0bp_to_ENSMUST00000078752,NM_001205369,NM_001205370,NM_177054,NM_199038,uc008lzq.2,uc008lzr.2,uc008lzs.2,uc012ccu.1,uc012ccv.1_5end|description=CAGE_peak_1_at_Casc4_5end|id=chr2:121692654..121692733,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.67e-18!71;UBERON:0003075!1.67e-18!71;UBERON:0007284!1.67e-18!71;UBERON:0000033!2.06e-18!63;UBERON:0001049!4.61e-18!52;UBERON:0005068!4.61e-18!52;UBERON:0006241!4.61e-18!52;UBERON:0007135!4.61e-18!52;UBERON:0000955!1.04e-17!50;UBERON:0006238!1.04e-17!50;UBERON:0002616!3.68e-17!49;UBERON:0003056!1.63e-15!49;UBERON:0001017!2.99e-15!73;UBERON:0005743!2.99e-15!73;UBERON:0003080!5.20e-15!40;UBERON:0000073!1.54e-14!75;UBERON:0001016!1.54e-14!75;UBERON:0004121!1.67e-14!102;UBERON:0000924!1.67e-14!102;UBERON:0006601!1.67e-14!102;UBERON:0002780!1.99e-14!39;UBERON:0001890!1.99e-14!39;UBERON:0006240!1.99e-14!39;UBERON:0002020!1.18e-13!34;UBERON:0002791!5.19e-12!29;UBERON:0003528!5.19e-12!29;UBERON:0001893!5.19e-12!29;UBERON:0000468!6.52e-11!333;UBERON:0007811!9.89e-11!86;UBERON:0000153!1.50e-10!94;UBERON:0000475!8.10e-10!200;UBERON:0000025!2.33e-09!114;UBERON:0004111!3.01e-09!122;UBERON:0000956!7.75e-09!21;UBERON:0001869!7.75e-09!21;UBERON:0000203!7.75e-09!21;UBERON:0002619!3.61e-08!17;UBERON:0002021!6.51e-08!10;UBERON:0000411!6.51e-08!10;UBERON:0001950!6.51e-08!10;UBERON:0000922!1.45e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.58e-19,54;UBERON:0001049,4.59e-18,52;UBERON:0005068,4.59e-18,52;UBERON:0006241,4.59e-18,52;UBERON:0007135,4.59e-18,52;UBERON:0002346,2.22e-17,64;UBERON:0003075,2.22e-17,64;UBERON:0007284,2.22e-17,64;UBERON:0000955,3.35e-16,47;UBERON:0006238,3.35e-16,47;UBERON:0002616,1.15e-15,46;UBERON:0003056,1.63e-15,49;UBERON:0001017,2.97e-15,73;UBERON:0010371,3.74e-15,73;UBERON:0003080,5.18e-15,40;UBERON:0001016,1.53e-14,75;UBERON:0010314,1.59e-14,92;UBERON:0002780,1.98e-14,39;UBERON:0001890,1.98e-14,39;UBERON:0006240,1.98e-14,39;UBERON:0002020,1.18e-13,34;UBERON:0004121,3.17e-13,95;UBERON:0000924,3.17e-13,95;UBERON:0006601,3.17e-13,95;UBERON:0003528,5.18e-12,29;UBERON:0002791,5.18e-12,29;UBERON:0001893,5.18e-12,29;UBERON:0000025,2.33e-09,114;UBERON:0004111,3.00e-09,122;UBERON:0000956,7.73e-09,21;UBERON:0001869,7.73e-09,21;UBERON:0000203,7.73e-09,21;UBERON:0002619,3.61e-08,17;UBERON:0002021,6.50e-08,10;UBERON:0000411,6.50e-08,10;UBERON:0001950,6.50e-08,10|phase1_expression=40.1973606233033,0.348975407639361,0.454999239389536,0.60492842261366,1.50268718983904,11.5836697619204,13.5495331545405,9.16775596435192,18.161745157565,14.0438715793196,15.2383991720699,11.4871908953284,6.33442700745461,5.76974655965383,4.66353666541928,6.68168382386426,4.19737126876888,10.8834447048592,9.59801035240171,8.06340338416257,27.8941991695509,11.6170412905036,10.1867917764185,5.91971964335605,4.81759490241057,1.14846392823004,2.15380998079537,4.52489588640367,11.7814520062952,8.31699428207772,4.43461021310609,6.98533740805594,9.22597181376855,0,2.3108129580102,2.99222361645286,3.26670970019791,0.418531630736908,0,0.523523743973798,0.588231488031014,0,0,32.7331726736501,33.9612719585374,33.405508893426,10.9534788208725,12.4274339136855,19.1126978978991,33.8308024389253,19.7380854491761,12.9377307928474,9.56360854529097,6.5282592781021,19.8295341494054,19.8089765747679,23.7822755149168,15.4701627683233,36.0123300330084,33.8554226734101,22.1840991227163,12.876092218627,10.6715375533337,0.449949858640699,0,0,9.28760342607055,12.6792040756113,36.3950539202757,29.1612826796452,27.3422449756797,29.4220513935918,33.3511496836936,34.664896177832,24.9198224647415,27.5765635983006,45.1475112097494,55.2886173908863,63.746711301341,41.0166354840903,43.548118354747,47.4031167206652,35.7354238721768,39.9561453122493,38.657956687533,61.8720029494702,74.745132419529,53.1238420602107,17.7956554332983,16.92802946392,13.6236309689789,10.3250865237766,1.3599426674155,2.69851595818909,11.0461990966104,12.9927797258227,14.4657752735704,0,0,0,35.6333852035002,0,0,0,14.5048997477513,15.7083116594561,13.1436355703844,15.300639882354,5.43769555659061,59.0799713478003,19.0833859442749,30.4465478312141,26.7513976817028,28.4865790644457,51.1510876040316,38.8309767208697,18.7868175478124,15.9059292611903,7.96149496754887,43.0299820860108,17.2256384399107,14.0613823409214,9.31958806090611,76.4157880200138,64.9284791121711,12.0064815948038,7.42853771936706,4.19931911695385,5.46401976414178,74.8953197024114,72.285095245343,84.4397246198449,87.9551060172919,104.843337505436,83.5307939129432,88.0970058457924,31.9775602489993,27.2451265636104,45.2373737596278,14.3100462002802,22.9011979614359,21.8406999211799,32.2311212351575,31.3466021098287,50.4150458711339,44.8398020996974,39.0736191414069,39.8403190938084,16.5987354558289,24.5837904218165,29.9116911078713,28.2762494831572,32.253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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319996 | |||
|HGNC= | |||
|MCL_coexpression_id=361 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P2L7 | |||
|association_with_transcript=0bp_to_ENSMUST00000078752,NM_001205369,NM_001205370,NM_177054,NM_199038,uc008lzq.2,uc008lzr.2,uc008lzs.2,uc012ccu.1,uc012ccv.1_5end | |||
|cluster_id=chr2:121692654..121692733,+ | |||
|description=CAGE_peak_1_at_Casc4_5end | |||
|id=chr2:121692654..121692733,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.67e-18!71;UBERON:0003075!1.67e-18!71;UBERON:0007284!1.67e-18!71;UBERON:0000033!2.06e-18!63;UBERON:0001049!4.61e-18!52;UBERON:0005068!4.61e-18!52;UBERON:0006241!4.61e-18!52;UBERON:0007135!4.61e-18!52;UBERON:0000955!1.04e-17!50;UBERON:0006238!1.04e-17!50;UBERON:0002616!3.68e-17!49;UBERON:0003056!1.63e-15!49;UBERON:0001017!2.99e-15!73;UBERON:0005743!2.99e-15!73;UBERON:0003080!5.20e-15!40;UBERON:0000073!1.54e-14!75;UBERON:0001016!1.54e-14!75;UBERON:0004121!1.67e-14!102;UBERON:0000924!1.67e-14!102;UBERON:0006601!1.67e-14!102;UBERON:0002780!1.99e-14!39;UBERON:0001890!1.99e-14!39;UBERON:0006240!1.99e-14!39;UBERON:0002020!1.18e-13!34;UBERON:0002791!5.19e-12!29;UBERON:0003528!5.19e-12!29;UBERON:0001893!5.19e-12!29;UBERON:0000468!6.52e-11!333;UBERON:0007811!9.89e-11!86;UBERON:0000153!1.50e-10!94;UBERON:0000475!8.10e-10!200;UBERON:0000025!2.33e-09!114;UBERON:0004111!3.01e-09!122;UBERON:0000956!7.75e-09!21;UBERON:0001869!7.75e-09!21;UBERON:0000203!7.75e-09!21;UBERON:0002619!3.61e-08!17;UBERON:0002021!6.51e-08!10;UBERON:0000411!6.51e-08!10;UBERON:0001950!6.51e-08!10;UBERON:0000922!1.45e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.58e-19,54;UBERON:0001049,4.59e-18,52;UBERON:0005068,4.59e-18,52;UBERON:0006241,4.59e-18,52;UBERON:0007135,4.59e-18,52;UBERON:0002346,2.22e-17,64;UBERON:0003075,2.22e-17,64;UBERON:0007284,2.22e-17,64;UBERON:0000955,3.35e-16,47;UBERON:0006238,3.35e-16,47;UBERON:0002616,1.15e-15,46;UBERON:0003056,1.63e-15,49;UBERON:0001017,2.97e-15,73;UBERON:0010371,3.74e-15,73;UBERON:0003080,5.18e-15,40;UBERON:0001016,1.53e-14,75;UBERON:0010314,1.59e-14,92;UBERON:0002780,1.98e-14,39;UBERON:0001890,1.98e-14,39;UBERON:0006240,1.98e-14,39;UBERON:0002020,1.18e-13,34;UBERON:0004121,3.17e-13,95;UBERON:0000924,3.17e-13,95;UBERON:0006601,3.17e-13,95;UBERON:0003528,5.18e-12,29;UBERON:0002791,5.18e-12,29;UBERON:0001893,5.18e-12,29;UBERON:0000025,2.33e-09,114;UBERON:0004111,3.00e-09,122;UBERON:0000956,7.73e-09,21;UBERON:0001869,7.73e-09,21;UBERON:0000203,7.73e-09,21;UBERON:0002619,3.61e-08,17;UBERON:0002021,6.50e-08,10;UBERON:0000411,6.50e-08,10;UBERON:0001950,6.50e-08,10 | |||
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| |||
|short_description=p1@Casc4 | |||
}} |
Latest revision as of 15:09, 25 September 2015
Short description: | p1@Casc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Casc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | 0bp_to_ENSMUST00000078752, NM_001205369, NM_001205370, NM_177054, NM_199038, uc008lzq.2, uc008lzr.2, uc008lzs.2, uc012ccu.1, uc012ccv.1_5end |
EntrezGene: | Casc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data