FFCP PHASE1:Mm9::chr4:11893471..11893482,-: Difference between revisions
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{{FFCP|EntrezGene=381511|HGNC=|MCL_coexpression_id=3453|UniProt=Q3UV70|association_with_transcript=84bp_to_ENSMUST00000056050_5end|description=CAGE_peak_3_at_Pdp1_5end|id=chr4:11893471..11893482,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.60e-10,3;CL:0002605,4.76e-07,2;CL:0002604,4.76e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!7.49e-11!34;UBERON:0001049!1.29e-09!52;UBERON:0005068!1.29e-09!52;UBERON:0006241!1.29e-09!52;UBERON:0007135!1.29e-09!52;UBERON:0000955!2.41e-09!50;UBERON:0006238!2.41e-09!50;UBERON:0002616!7.33e-09!49;UBERON:0002791!7.39e-09!29;UBERON:0003528!7.39e-09!29;UBERON:0001893!7.39e-09!29;UBERON:0000073!7.94e-09!75;UBERON:0001016!7.94e-09!75;UBERON:0004121!1.04e-08!102;UBERON:0000924!1.04e-08!102;UBERON:0006601!1.04e-08!102;UBERON:0002619!1.17e-08!17;UBERON:0000033!1.71e-08!63;UBERON:0002021!3.56e-08!10;UBERON:0000411!3.56e-08!10;UBERON:0001950!3.56e-08!10;UBERON:0001017!3.68e-08!73;UBERON:0005743!3.68e-08!73;UBERON:0002346!1.18e-07!71;UBERON:0003075!1.18e-07!71;UBERON:0007284!1.18e-07!71;UBERON:0003080!1.64e-07!40;UBERON:0002780!5.28e-07!39;UBERON:0001890!5.28e-07!39;UBERON:0006240!5.28e-07!39;UBERON:0000956!8.71e-07!21;UBERON:0001869!8.71e-07!21;UBERON:0000203!8.71e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.50e-27,10;UBERON:0000411,6.50e-27,10;UBERON:0001950,6.50e-27,10;UBERON:0002619,2.58e-22,17;UBERON:0000073,1.55e-21,54;UBERON:0003080,1.61e-21,40;UBERON:0000956,3.17e-21,21;UBERON:0001869,3.17e-21,21;UBERON:0000203,3.17e-21,21;UBERON:0003528,2.07e-20,29;UBERON:0002791,2.07e-20,29;UBERON:0001893,2.07e-20,29;UBERON:0002780,1.74e-19,39;UBERON:0001890,1.74e-19,39;UBERON:0006240,1.74e-19,39;UBERON:0002616,2.88e-18,46;UBERON:0000955,8.33e-18,47;UBERON:0006238,8.33e-18,47;UBERON:0001049,8.93e-18,52;UBERON:0005068,8.93e-18,52;UBERON:0006241,8.93e-18,52;UBERON:0007135,8.93e-18,52;UBERON:0002020,5.34e-17,34;UBERON:0003056,6.13e-17,49;UBERON:0001017,1.33e-16,73;UBERON:0001016,4.73e-16,75;UBERON:0002346,9.12e-14,64;UBERON:0003075,9.12e-14,64;UBERON:0007284,9.12e-14,64;UBERON:0004121,3.24e-13,95;UBERON:0000924,3.24e-13,95;UBERON:0006601,3.24e-13,95;UBERON:0010371,3.66e-13,73;UBERON:0004684,1.60e-10,3;UBERON:0002275,1.60e-10,3;UBERON:0010314,1.77e-08,92|phase1_expression=0.320297694209588,0,0.909998478779072,0,0.500895729946347,0.33575854382378,0.467225281191051,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.34968160967599,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0,0,0,0.629484089877886,0.608261587317087,0.550640256485045,0,0.218025156380447,1.09843091367236,1.1665793944457,0.839918529752175,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0.286533439938757,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0.244981598429908,0.383381884072945,0,1.10115880999389,4.59674417106676,2.4577045320999,0.263772575460388,0.548925861614458,0,0.558365998002762,2.8138130501584,0.61119299110724,0.883885756421003,0.711858403995515,0.559198337475902,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,1.06001872353102,0,0,0,0,0.649473123033642,0.760079596425296,0,0.22836775943812,0,0.890652834388949,0,0.608930956624282,0.691846491768175,0,0.470354828542819,0.125666591329675,0.494389935468748,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0.508280908292259,1.64769703345305,4.11750542536764,0.753926112677186,4.34560800480691,4.09144731728529,4.77912502486988,4.54275536589721,0.509196819251581,0.248813941220186,0,0.210441855886474,0,0.459804208866946,0.180062129805349,0,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.700592054203017,0.16455984991348,0,0.56748166682099,0.146199987425332,0,0,0.420579897128254,0.617427674275707,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0.162964976442026,0,0.704070744865506,0,0.476087281772027,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0,0.433947175744535,3.01582567878545,0,0,0,0.481651769963376,0.937693492737625,0.327869890753351,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0.395287777946524,0.963963949265421,0.141940085208269,0,0.81443479676788,0.494910368917606,0,0,0.302323556964751,0,0,0,0.258428293168221,0.3635337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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381511 | |||
|HGNC= | |||
|MCL_coexpression_id=3453 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UV70 | |||
|association_with_transcript=84bp_to_ENSMUST00000056050_5end | |||
|cluster_id=chr4:11893471..11893482,- | |||
|description=CAGE_peak_3_at_Pdp1_5end | |||
|id=chr4:11893471..11893482,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.60e-10,3;CL:0002605,4.76e-07,2;CL:0002604,4.76e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.49e-11!34;UBERON:0001049!1.29e-09!52;UBERON:0005068!1.29e-09!52;UBERON:0006241!1.29e-09!52;UBERON:0007135!1.29e-09!52;UBERON:0000955!2.41e-09!50;UBERON:0006238!2.41e-09!50;UBERON:0002616!7.33e-09!49;UBERON:0002791!7.39e-09!29;UBERON:0003528!7.39e-09!29;UBERON:0001893!7.39e-09!29;UBERON:0000073!7.94e-09!75;UBERON:0001016!7.94e-09!75;UBERON:0004121!1.04e-08!102;UBERON:0000924!1.04e-08!102;UBERON:0006601!1.04e-08!102;UBERON:0002619!1.17e-08!17;UBERON:0000033!1.71e-08!63;UBERON:0002021!3.56e-08!10;UBERON:0000411!3.56e-08!10;UBERON:0001950!3.56e-08!10;UBERON:0001017!3.68e-08!73;UBERON:0005743!3.68e-08!73;UBERON:0002346!1.18e-07!71;UBERON:0003075!1.18e-07!71;UBERON:0007284!1.18e-07!71;UBERON:0003080!1.64e-07!40;UBERON:0002780!5.28e-07!39;UBERON:0001890!5.28e-07!39;UBERON:0006240!5.28e-07!39;UBERON:0000956!8.71e-07!21;UBERON:0001869!8.71e-07!21;UBERON:0000203!8.71e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.50e-27,10;UBERON:0000411,6.50e-27,10;UBERON:0001950,6.50e-27,10;UBERON:0002619,2.58e-22,17;UBERON:0000073,1.55e-21,54;UBERON:0003080,1.61e-21,40;UBERON:0000956,3.17e-21,21;UBERON:0001869,3.17e-21,21;UBERON:0000203,3.17e-21,21;UBERON:0003528,2.07e-20,29;UBERON:0002791,2.07e-20,29;UBERON:0001893,2.07e-20,29;UBERON:0002780,1.74e-19,39;UBERON:0001890,1.74e-19,39;UBERON:0006240,1.74e-19,39;UBERON:0002616,2.88e-18,46;UBERON:0000955,8.33e-18,47;UBERON:0006238,8.33e-18,47;UBERON:0001049,8.93e-18,52;UBERON:0005068,8.93e-18,52;UBERON:0006241,8.93e-18,52;UBERON:0007135,8.93e-18,52;UBERON:0002020,5.34e-17,34;UBERON:0003056,6.13e-17,49;UBERON:0001017,1.33e-16,73;UBERON:0001016,4.73e-16,75;UBERON:0002346,9.12e-14,64;UBERON:0003075,9.12e-14,64;UBERON:0007284,9.12e-14,64;UBERON:0004121,3.24e-13,95;UBERON:0000924,3.24e-13,95;UBERON:0006601,3.24e-13,95;UBERON:0010371,3.66e-13,73;UBERON:0004684,1.60e-10,3;UBERON:0002275,1.60e-10,3;UBERON:0010314,1.77e-08,92 | |||
|phase1_expression=0.320297694209588,0,0.909998478779072,0,0.500895729946347,0.33575854382378,0.467225281191051,0.387369970324729,0.281577444303333,0.234064526321993,0,0,0.342401459862411,0.34968160967599,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0.380046838912748,0,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0,0,0,0.629484089877886,0.608261587317087,0.550640256485045,0,0.218025156380447,1.09843091367236,1.1665793944457,0.839918529752175,0,0.335565212115473,0.725362142011344,1.34437519656986,0,0.286533439938757,0.515672092277442,0.404632921719196,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.571301968807607,0.441737081903227,0.244981598429908,0.383381884072945,0,1.10115880999389,4.59674417106676,2.4577045320999,0.263772575460388,0.548925861614458,0,0.558365998002762,2.8138130501584,0.61119299110724,0.883885756421003,0.711858403995515,0.559198337475902,0.530083353332288,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0.519572009205738,1.06001872353102,0,0,0,0,0.649473123033642,0.760079596425296,0,0.22836775943812,0,0.890652834388949,0,0.608930956624282,0.691846491768175,0,0.470354828542819,0.125666591329675,0.494389935468748,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0.11981512450592,0.599902730993408,0.508280908292259,1.64769703345305,4.11750542536764,0.753926112677186,4.34560800480691,4.09144731728529,4.77912502486988,4.54275536589721,0.509196819251581,0.248813941220186,0,0.210441855886474,0,0.459804208866946,0.180062129805349,0,0.204109497453984,0.12811372028485,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0.393528463494808,0.154267112887378,0,0.268273401399619,0.700592054203017,0.16455984991348,0,0.56748166682099,0.146199987425332,0,0,0.420579897128254,0.617427674275707,0,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0.296452627087149,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0.162964976442026,0,0.704070744865506,0,0.476087281772027,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0,0.433947175744535,3.01582567878545,0,0,0,0.481651769963376,0.937693492737625,0.327869890753351,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0.395287777946524,0.963963949265421,0.141940085208269,0,0.81443479676788,0.494910368917606,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.329098041204242,0.608929898229199,0,0,0,0.16488625294148,1.45317984026315,0.361877549568935,0.119372344003136,0,0,1.11255181206306,0,0,0,0.188368457004691,0,0,0,0,0.414599921413271,0,0,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.330613822901344,0,0.129614973291793,0.621339313086926,0.56369293868419,0.149516546043979,0,0.388902376688095,0.129159823477731,0.506868376472335,0.234714477291508,0.781226309063701,1.15345278868282,0.483168241652012,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0.194915761479505,0,0.116876902181569,0.680191150845634,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,1.12950368523413,1.38097570952153,0.572895513439397,1.20297227640581,4.7955776383945,3.7769694869485,4.72515750162264,4.95353323546643,5.43770890781046,4.65984280576638,0,0,0,0,0,0.367687016900028,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0,0.0574354689556133,0,0.231768651889711,0,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0,0.581385666529314,0.0941093804153306,0.338458431566706,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0,0,0.644613162144895,0.765153328275374,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Pdp1 | |||
}} |
Latest revision as of 06:24, 26 September 2015
Short description: | p3@Pdp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pdp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3453 |
Association with transcript: | 84bp_to_ENSMUST00000056050_5end |
EntrezGene: | Pdp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.60e-10 | 3 |
astrocyte of the cerebral cortex | 4.76e-07 | 2 |
astrocyte of the hippocampus | 4.76e-07 | 2 |