FFCP PHASE1:Hg19::chr9:118916434..118916450,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |||
|TSSclassifier=strong | |||
|UniProt=Q13219 | |||
|association_with_transcript=351bp_to_ENST00000328252_5end | |||
|cluster_id=chr9:118916434..118916450,+ | |||
|description=CAGE_peak_6_at_PAPPA_5end | |||
|id=chr9:118916434..118916450,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-29!180;CL:0000187!1.11e-19!54;CL:0000192!2.13e-19!42;CL:0000514!2.13e-19!42;CL:0000680!5.92e-18!57;CL:0000056!5.92e-18!57;CL:0000355!5.92e-18!57;CL:0000183!8.99e-18!59;CL:0000057!1.27e-17!75;CL:0000359!7.74e-17!32;CL:0000393!2.65e-15!60;CL:0000211!2.65e-15!60;CL:0000222!1.10e-08!119;CL:0002494!8.81e-08!16;CL:0002539!7.14e-07!10;CL:0002620!8.18e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.64e-19;32!CL:0000192;2.99e-16;43!CL:0000187;1.48e-11;55!CL:0002494;5.92e-10;16!CL:0000393;1.58e-09;61!CL:0000211;1.58e-09;61!CL:0002539;5.15e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.91e-22,43;CL:0000514,4.91e-22,43;CL:0000187,3.41e-21,55;CL:0000359,1.18e-20,32;CL:0000680,2.98e-19,58;CL:0000056,2.98e-19,58;CL:0000355,2.98e-19,58;CL:0000393,1.61e-17,61;CL:0000211,1.61e-17,61;CL:0000057,1.80e-15,76;CL:0002494,2.17e-10,16;CL:0000222,2.99e-09,121;CL:0000048,5.83e-09,427;CL:0000723,2.51e-08,433;CL:0002539,5.11e-08,10;CL:0000034,1.58e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.99e-16;43!CL:0000355;5.14e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.52e-17!83;UBERON:0002329!5.52e-17!83;UBERON:0003077!5.52e-17!83;UBERON:0003059!5.52e-17!83;UBERON:0007282!5.52e-17!83;UBERON:0009618!5.52e-17!83;UBERON:0007285!5.52e-17!83;UBERON:0004290!2.92e-16!70;UBERON:0001134!1.22e-15!61;UBERON:0002036!1.22e-15!61;UBERON:0003082!1.22e-15!61;UBERON:0002385!2.13e-15!63;UBERON:0001015!2.13e-15!63;UBERON:0000383!2.13e-15!63;UBERON:0000486!2.26e-14!82;UBERON:0005256!1.41e-11!143;UBERON:0002100!7.19e-11!216;UBERON:0004872!3.44e-10!84;UBERON:0003104!5.54e-10!238;UBERON:0009142!5.54e-10!238;UBERON:0001637!6.78e-10!42;UBERON:0003509!6.78e-10!42;UBERON:0004572!6.78e-10!42;UBERON:0000481!9.79e-10!347;UBERON:0004573!1.43e-09!33;UBERON:0004571!1.43e-09!33;UBERON:0002049!2.85e-09!79;UBERON:0007798!2.85e-09!79;UBERON:0004535!6.24e-08!110;UBERON:0000948!7.09e-08!24;UBERON:0005498!7.09e-08!24;UBERON:0004140!7.09e-08!24;UBERON:0009881!7.09e-08!24;UBERON:0004141!7.09e-08!24;UBERON:0003084!7.09e-08!24;UBERON:0007005!7.09e-08!24;UBERON:0004139!7.09e-08!24;UBERON:0004291!7.09e-08!24;UBERON:0000475!8.83e-08!365;UBERON:0001009!1.01e-07!113;UBERON:0001981!1.11e-07!60;UBERON:0007500!1.11e-07!60;UBERON:0004537!1.11e-07!60;UBERON:0006965!1.11e-07!60;UBERON:0001135!1.15e-07!15;UBERON:0003914!1.77e-07!118;UBERON:0007100!4.39e-07!27;UBERON:0004237!7.14e-07!10;UBERON:0004695!7.14e-07!10;UBERON:0002111!7.14e-07!10;UBERON:0004178!7.14e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.75e-11;33!UBERON:0004571;3.75e-11;33!UBERON:0001637;2.49e-09;42!UBERON:0003509;2.49e-09;42!UBERON:0004572;2.49e-09;42!UBERON:0001135;2.94e-08;15!UBERON:0004237;5.15e-08;10!UBERON:0004695;5.15e-08;10!UBERON:0002111;5.15e-08;10!UBERON:0004178;5.15e-08;10!UBERON:0000948;5.44e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.55e-17,62;UBERON:0002036,5.55e-17,62;UBERON:0003082,5.55e-17,62;UBERON:0002385,5.76e-16,64;UBERON:0001015,5.76e-16,64;UBERON:0000383,5.76e-16,64;UBERON:0002329,7.12e-16,71;UBERON:0003059,7.12e-16,71;UBERON:0007282,7.12e-16,71;UBERON:0004290,7.12e-16,71;UBERON:0009618,7.12e-16,71;UBERON:0003077,1.99e-15,72;UBERON:0007285,1.99e-15,72;UBERON:0007524,5.37e-15,73;UBERON:0007503,1.20e-13,78;UBERON:0000486,3.08e-13,83;UBERON:0001637,3.40e-13,42;UBERON:0003509,3.40e-13,42;UBERON:0004572,3.40e-13,42;UBERON:0004872,1.44e-12,83;UBERON:0004573,5.24e-12,33;UBERON:0004571,5.24e-12,33;UBERON:0002049,1.06e-10,78;UBERON:0007798,1.06e-10,78;UBERON:0004535,1.16e-10,109;UBERON:0001009,6.17e-10,112;UBERON:0007500,2.61e-09,59;UBERON:0001981,2.61e-09,59;UBERON:0004537,2.61e-09,59;UBERON:0006965,2.61e-09,59;UBERON:0003104,4.14e-09,160;UBERON:0009142,4.14e-09,160;UBERON:0005256,6.97e-09,122;UBERON:0003914,3.36e-08,117;UBERON:0001135,4.21e-08,15;UBERON:0004237,5.11e-08,10;UBERON:0004695,5.11e-08,10;UBERON:0002111,5.11e-08,10;UBERON:0004178,5.11e-08,10;UBERON:0000948,5.84e-08,24;UBERON:0005498,5.84e-08,24;UBERON:0004140,5.84e-08,24;UBERON:0009881,5.84e-08,24;UBERON:0004141,5.84e-08,24;UBERON:0003084,5.84e-08,24;UBERON:0007005,5.84e-08,24;UBERON:0004139,5.84e-08,24;UBERON:0004291,5.84e-08,24;UBERON:0000055,1.89e-07,68;UBERON:0000490,3.51e-07,148;UBERON:0002100,3.80e-07,199 | |||
|phase1_expression=1.45342703416445,2.78330681058278,2.81908808191942,5.00366491765652,1.78784437770915,3.48935409640147,0,1.26343974685366,0.522371256399677,0.737201809504527,0,4.80571018686379,3.9565046734268,1.23766352960047,2.65117900582333,3.36162573225888,4.82155622419182,8.76372108464848,4.39139518911456,0,0.408001382488506,0,0.85870796139317,0.958120975510189,1.75759695432724,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.79007586580942,1.0843174571537,4.01070328508712,2.02785126545153,2.3858578411533,3.89307896242109,2.17430079477356,3.32594096193846,2.28370442802128,1.30979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,3.03913227994991,7.15009576391382,7.45775213946916,0.709336764396714,3.92474320099615,7.47242970107935,4.68668341992604,2.17847724779836,2.69421344139376,2.61539044981534,2.4217188423189,1.15235184896,1.17160715916898,1.24864030732128,0,0.597794722207204,0.704606991862589,0.971237666208789,0.561803226808994,1.22492502752936,0,1.23990937410919,2.37600571456411,5.68713937340681,0.910161361938026,3.59309070908119,0,0.625592599359821,0.277064115484183,0.877955241761676,1.22595118319608,2.40380894250555,1.47461838108027,1.79389635688862,2.77624605464138,1.48352330811693,2.10063767259082,0.824420233907511,2.83404594050192,0.930584281657949,4.72573730275545,1.75386609290158,3.78650661366172,3.03764665519588,2.26304479546337,2.4850671476163,0.604512589365842,0.67824236924195,0.966304265816484,0.545492241181669,1.43402297694502,0,0.265059536642971,0.116193942869518,0,0.504641701751257,0,1.56449532329816,1.28648187638577,1.38134921352481,2.78620756819187,0,0.709840800239063,0.842923450390509,1.68707720918437,0.661763836394364,0.871517776369625,0.474541238222193,1.07865046528132,0.784885860501384,1.15424147083917,0,1.40241773803446,1.2347220339942,4.41026134156626,0,0,0,0,0,2.74508496477641,0.219500570817251,0,0,0,2.28065813717227,0,0,0.695582429850461,8.10119990227169,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,1.70130116690864,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.560655421726804,0,0.1466765716419,4.65378176728,0,0.845302752556,1.59562869950922,1.04007436911366,0,0,0.266422179016099,2.28764789853036,0,3.29296134712308,0.65147236858747,0,0,1.80863626235752,2.61460037580088,4.09889263846434,0,0,0,3.11512312139057,1.14861935834114,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,2.20844685094452,2.00068208423871,1.08506009479894,3.53550464602372,2.67643483195743,2.05013139544115,1.87426263988341,2.40756879782175,0,1.03473071292505,1.32845119707087,0.737476674166813,1.12948698808508,0.391602314925481,0,0,0,0,0.606255142892519,0,1.20956117331872,2.23297027036899,7.51963669111506,3.36792113319688,3.45975702990393,2.55853624533352,5.30817939773905,0,0.771048469013278,0.177561725313127,0.821271560138091,3.63478100428535,1.74315567689939,0,0.40101294060657,0.184161977871793,1.60740227430449,0.910455840033585,2.62248829918848,0,0.15403067420883,0,0,0.844413031143006,1.13733384070897,0.340187410553031,0.647747748306418,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.512900250232778,1.96808787419823,0.976135183992909,4.01859945426117,0.0915694648183434,0,0.574265537996172,0,0,1.54673149267395,1.07834031980251,0.921022048356777,1.24052915236078,2.0409846524972,2.0302337147992,0.681813019328807,0.445160178233687,0,0,0,0,0.464845549297286,18.5739284630078,4.1822236209636,3.08033580176089,1.59691809095107,6.08953094452551,3.33583594387056,4.29374660225974,0.744316738719335,3.16379424718726,4.19386426632415,1.535386747868,1.28381696410176,3.5002357271853,7.8494864019923,3.05783177891635,3.0199073270966,2.23843564456804,1.41527737101321,4.75530963519025,3.37006764991185,0.975267478179181,1.21856744815642,1.05650146756755,1.50149902548784,2.82810863907426,1.13008116620243,2.75682671773062,3.3171948762061,7.0152141640602,1.73632660280006,0.655894752046633,3.85529716229138,1.54911749049875,2.25356482025793,1.72093622644862,2.84922218938051,4.63672366925625,0.354761064070598,0.633322905892992,1.31717957183961,0.379473173765715,1.04980416073495,0.0962221127255121,0,0,3.67160823029439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,2.46174797895425,0,0,2.81974010175699,0,0.879049075631364,0,0,0,1.67121139316383,0.890894042497916,0.614321404198464,0,0,3.11664374064136,0,0,0.796991953004279,1.10513566212459,0,3.37486652257111,0,3.73247505194169,0,1.25314822272926,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,2.33283690706603,0,0,0,0,0,0,0.219385397153973,2.06983080686081,0,1.15425387755696,0.683652335082007,0,0,0,7.97502899329799,3.57230614267263,12.7928346244472,0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| |||
|short_description=p6@PAPPA | |||
}} |
Latest revision as of 17:54, 24 September 2015
Short description: | p6@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PAPPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 351bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.91e-22 | 43 |
smooth muscle myoblast | 4.91e-22 | 43 |
muscle cell | 3.41e-21 | 55 |
vascular associated smooth muscle cell | 1.18e-20 | 32 |
muscle precursor cell | 2.98e-19 | 58 |
myoblast | 2.98e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.98e-19 | 58 |
electrically responsive cell | 1.61e-17 | 61 |
electrically active cell | 1.61e-17 | 61 |
fibroblast | 1.80e-15 | 76 |
cardiocyte | 2.17e-10 | 16 |
mesodermal cell | 2.99e-09 | 121 |
multi fate stem cell | 5.83e-09 | 427 |
somatic stem cell | 2.51e-08 | 433 |
aortic smooth muscle cell | 5.11e-08 | 10 |
stem cell | 1.58e-07 | 441 |