FFCP PHASE1:Mm9::chr6:113342411..113342478,+: Difference between revisions
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{{FFCP|EntrezGene=101100|HGNC=|MCL_coexpression_id=0|UniProt=A4Q9E5|association_with_transcript=0bp_to_ENSMUST00000032414_5end|description=CAGE_peak_2_at_Ttll3_5end|id=chr6:113342411..113342478,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.50e-11!63;UBERON:0001049!2.69e-10!52;UBERON:0005068!2.69e-10!52;UBERON:0006241!2.69e-10!52;UBERON:0007135!2.69e-10!52;UBERON:0002346!6.24e-10!71;UBERON:0003075!6.24e-10!71;UBERON:0007284!6.24e-10!71;UBERON:0001017!7.02e-10!73;UBERON:0005743!7.02e-10!73;UBERON:0000955!2.80e-09!50;UBERON:0006238!2.80e-09!50;UBERON:0002616!3.13e-09!49;UBERON:0000073!4.49e-09!75;UBERON:0001016!4.49e-09!75;UBERON:0003056!3.16e-08!49;UBERON:0004121!9.52e-08!102;UBERON:0000924!9.52e-08!102;UBERON:0006601!9.52e-08!102;UBERON:0001894!1.94e-07!10;UBERON:0006222!1.94e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-12,54;UBERON:0001017,3.37e-12,73;UBERON:0001049,9.27e-12,52;UBERON:0005068,9.27e-12,52;UBERON:0006241,9.27e-12,52;UBERON:0007135,9.27e-12,52;UBERON:0001016,1.54e-11,75;UBERON:0001894,2.81e-10,10;UBERON:0006222,2.81e-10,10;UBERON:0002616,3.67e-10,46;UBERON:0000955,9.22e-10,47;UBERON:0006238,9.22e-10,47;UBERON:0002346,9.74e-10,64;UBERON:0003075,9.74e-10,64;UBERON:0007284,9.74e-10,64;UBERON:0004121,5.09e-09,95;UBERON:0000924,5.09e-09,95;UBERON:0006601,5.09e-09,95;UBERON:0010371,5.15e-09,73;UBERON:0000007,1.10e-08,8;UBERON:0003296,1.10e-08,8;UBERON:0010133,1.10e-08,8;UBERON:0003080,2.97e-08,40;UBERON:0002780,1.44e-07,39;UBERON:0001890,1.44e-07,39;UBERON:0006240,1.44e-07,39;UBERON:0003056,2.25e-07,49;UBERON:0002048,8.30e-07,14;UBERON:0000117,8.30e-07,14;UBERON:0000171,8.30e-07,14;UBERON:0000170,8.30e-07,14;UBERON:0005597,8.30e-07,14;UBERON:0000118,8.30e-07,14|phase1_expression=13.2923543096979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8796104135375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.97717564461025,0.777719596297134,2.09979632438044,1.43752564364972,0,0,0,0,0,0.515672092277442,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0,0,0,3.59520132622086,18.0582603501131,0.103689612308478,0,0,3.14216082844184,0.662605622854841,0.489963196859816,0.0958454710182364,0,1.10115880999389,1.40456071893706,2.91852413186863,3.16527090552465,1.46380229763855,0,1.3959149950069,3.93933827022176,1.37518422999129,2.94628585473668,1.99320353118744,0.559198337475902,0,0,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,10.140726223921,0,0,0,0,0,0,1.7127581957859,0,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,17.2740670236813,21.5730108017859,0,0,0,0,7.78911324905078,3.66000482254901,1.25654352112864,1.39059456153821,1.27857728665165,4.36354893575076,2.27137768294861,0.305518091550949,0.622034853050465,1.51633655060205,0.420883711772948,0.910843100738926,0.689706313300419,0.720248519221397,0.30140963567143,1.29269348387523,2.0498195245576,1.03071897015702,0.258703370739016,0.646703978798527,0.567318240503458,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,5.04695876553905,4.83651678182637,0,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0,0,0,0.193952487167626,0.350679099451593,0.126473074248515,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,10.1614254591633,0,0,0,0.938760993154008,3.85264392116176,7.14130922658041,10.3420833364633,3.4679731703362,3.5434350343804,3.02964060449226,4.7520361267564,7.25276923836761,7.81104916340163,0,0,0,0,2.24770825982909,3.04750385139728,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,6.52924391958036,0.890328018336276,0.977321756121456,18.3116836499514,0,0,0,0.565815239267694,0,0,1.29214146584111,1.09060118843252,0.356497378384721,0.316036757935816,0,0,4.08527526904546,2.70091641046965,3.36332577835162,4.28674070063185,6.91626911204867,7.84822797449111,5.75921572107423,5.17590413494819,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,2.78137953015765,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0,0,0.134864346384821,0.165306911450672,0,0,0,51.2960574202613,0.598066184175915,0.330916980914195,1.16670713006429,0.258319646955462,0.844780627453891,0.58678619322877,1.0416350787516,0.209718688851422,9.18019659138823,59.0461512828624,0,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0.460325236507177,0,0.1718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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101100 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=A4Q9E5 | |||
|association_with_transcript=0bp_to_ENSMUST00000032414_5end | |||
|cluster_id=chr6:113342411..113342478,+ | |||
|description=CAGE_peak_2_at_Ttll3_5end | |||
|id=chr6:113342411..113342478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.50e-11!63;UBERON:0001049!2.69e-10!52;UBERON:0005068!2.69e-10!52;UBERON:0006241!2.69e-10!52;UBERON:0007135!2.69e-10!52;UBERON:0002346!6.24e-10!71;UBERON:0003075!6.24e-10!71;UBERON:0007284!6.24e-10!71;UBERON:0001017!7.02e-10!73;UBERON:0005743!7.02e-10!73;UBERON:0000955!2.80e-09!50;UBERON:0006238!2.80e-09!50;UBERON:0002616!3.13e-09!49;UBERON:0000073!4.49e-09!75;UBERON:0001016!4.49e-09!75;UBERON:0003056!3.16e-08!49;UBERON:0004121!9.52e-08!102;UBERON:0000924!9.52e-08!102;UBERON:0006601!9.52e-08!102;UBERON:0001894!1.94e-07!10;UBERON:0006222!1.94e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.41e-12,54;UBERON:0001017,3.37e-12,73;UBERON:0001049,9.27e-12,52;UBERON:0005068,9.27e-12,52;UBERON:0006241,9.27e-12,52;UBERON:0007135,9.27e-12,52;UBERON:0001016,1.54e-11,75;UBERON:0001894,2.81e-10,10;UBERON:0006222,2.81e-10,10;UBERON:0002616,3.67e-10,46;UBERON:0000955,9.22e-10,47;UBERON:0006238,9.22e-10,47;UBERON:0002346,9.74e-10,64;UBERON:0003075,9.74e-10,64;UBERON:0007284,9.74e-10,64;UBERON:0004121,5.09e-09,95;UBERON:0000924,5.09e-09,95;UBERON:0006601,5.09e-09,95;UBERON:0010371,5.15e-09,73;UBERON:0000007,1.10e-08,8;UBERON:0003296,1.10e-08,8;UBERON:0010133,1.10e-08,8;UBERON:0003080,2.97e-08,40;UBERON:0002780,1.44e-07,39;UBERON:0001890,1.44e-07,39;UBERON:0006240,1.44e-07,39;UBERON:0003056,2.25e-07,49;UBERON:0002048,8.30e-07,14;UBERON:0000117,8.30e-07,14;UBERON:0000171,8.30e-07,14;UBERON:0000170,8.30e-07,14;UBERON:0005597,8.30e-07,14;UBERON:0000118,8.30e-07,14 | |||
|phase1_expression=13.2923543096979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.8796104135375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.97717564461025,0.777719596297134,2.09979632438044,1.43752564364972,0,0,0,0,0,0.515672092277442,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0,0,0,3.59520132622086,18.0582603501131,0.103689612308478,0,0,3.14216082844184,0.662605622854841,0.489963196859816,0.0958454710182364,0,1.10115880999389,1.40456071893706,2.91852413186863,3.16527090552465,1.46380229763855,0,1.3959149950069,3.93933827022176,1.37518422999129,2.94628585473668,1.99320353118744,0.559198337475902,0,0,0.579728977403356,0,0,0,0,0,1.12355536105401,0,0,0,10.140726223921,0,0,0,0,0,0,1.7127581957859,0,0.148442139064825,0,0.304465478312141,0,0.452167921657868,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,17.2740670236813,21.5730108017859,0,0,0,0,7.78911324905078,3.66000482254901,1.25654352112864,1.39059456153821,1.27857728665165,4.36354893575076,2.27137768294861,0.305518091550949,0.622034853050465,1.51633655060205,0.420883711772948,0.910843100738926,0.689706313300419,0.720248519221397,0.30140963567143,1.29269348387523,2.0498195245576,1.03071897015702,0.258703370739016,0.646703978798527,0.567318240503458,0.879755620819744,0.657587197282725,0.278047249225598,0.348252166522167,0,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,5.04695876553905,4.83651678182637,0,0.264450566663544,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0,0,0,0.193952487167626,0.350679099451593,0.126473074248515,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,10.1614254591633,0,0,0,0.938760993154008,3.85264392116176,7.14130922658041,10.3420833364633,3.4679731703362,3.5434350343804,3.02964060449226,4.7520361267564,7.25276923836761,7.81104916340163,0,0,0,0,2.24770825982909,3.04750385139728,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.321321316421807,6.52924391958036,0.890328018336276,0.977321756121456,18.3116836499514,0,0,0,0.565815239267694,0,0,1.29214146584111,1.09060118843252,0.356497378384721,0.316036757935816,0,0,4.08527526904546,2.70091641046965,3.36332577835162,4.28674070063185,6.91626911204867,7.84822797449111,5.75921572107423,5.17590413494819,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,2.78137953015765,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0.216010681643603,0,0,0.134864346384821,0.165306911450672,0,0,0,51.2960574202613,0.598066184175915,0.330916980914195,1.16670713006429,0.258319646955462,0.844780627453891,0.58678619322877,1.0416350787516,0.209718688851422,9.18019659138823,59.0461512828624,0,0,0,0.25984164595559,0,0.198681354781265,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0.292373642219257,0.192423683280659,0.116876902181569,0,0,0,0,0,0.563047426353546,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,1.35096360967266,0.453142408984205,1.03552062350364,0.103787347584177,1.19707462020309,1.02440163452481,0.972426868273176,0.419226325255965,1.47074806760011,1.77797382241292,2.26638562962784,2.88827288632634,0.505394423527595,2.02783439912192,1.13175804831646,1.68554713445788,1.72867911493147,1.37845125493472,1.90517476513229,1.73826488917283,1.73618298417335,2.06042950401653,1.47198920134397,1.37147700954166,1.59728225543404,1.66905332963125,1.74415699958794,1.88218760830661,1.77690676572521,1.28049581010941,0,1.62964936615034,1.68342681497322,2.01679530811096,1.0835493061312,0.409231043169689,1.23949472948773,1.15743966588685,2.49810577937946,1.63752125911786,2.14871054048298,0.57386499620653,0,0.463735671240843 | |||
|short_description=p2@Ttll3 | |||
}} |
Latest revision as of 11:26, 26 September 2015
Short description: | p2@Ttll3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ttll3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000032414_5end |
EntrezGene: | Ttll3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.41e-12 | 54 |
central nervous system | 3.37e-12 | 73 |
neural tube | 9.27e-12 | 52 |
neural rod | 9.27e-12 | 52 |
future spinal cord | 9.27e-12 | 52 |
neural keel | 9.27e-12 | 52 |
nervous system | 1.54e-11 | 75 |
diencephalon | 2.81e-10 | 10 |
future diencephalon | 2.81e-10 | 10 |
regional part of brain | 3.67e-10 | 46 |
brain | 9.22e-10 | 47 |
future brain | 9.22e-10 | 47 |
neurectoderm | 9.74e-10 | 64 |
neural plate | 9.74e-10 | 64 |
presumptive neural plate | 9.74e-10 | 64 |
ectoderm-derived structure | 5.09e-09 | 95 |
ectoderm | 5.09e-09 | 95 |
presumptive ectoderm | 5.09e-09 | 95 |
ecto-epithelium | 5.15e-09 | 73 |
pituitary gland | 1.10e-08 | 8 |
gland of diencephalon | 1.10e-08 | 8 |
neuroendocrine gland | 1.10e-08 | 8 |
anterior neural tube | 2.97e-08 | 40 |
regional part of forebrain | 1.44e-07 | 39 |
forebrain | 1.44e-07 | 39 |
future forebrain | 1.44e-07 | 39 |
pre-chordal neural plate | 2.25e-07 | 49 |
lung | 8.30e-07 | 14 |
respiratory tube | 8.30e-07 | 14 |
respiration organ | 8.30e-07 | 14 |
pair of lungs | 8.30e-07 | 14 |
lung primordium | 8.30e-07 | 14 |
lung bud | 8.30e-07 | 14 |