FFCP PHASE1:Hg19::chr9:36400693..36400716,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152006 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18052 | |||
|TSSclassifier=strong | |||
|UniProt=B1AM81 | |||
|association_with_transcript=154bp_to_ENST00000377877_5end | |||
|cluster_id=chr9:36400693..36400716,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_9_at_RNF38_5end | |||
|id=chr9:36400693..36400716,- | |||
|ontology_enrichment_celltype=CL:0000037!3.49e-43!172;CL:0000566!3.49e-43!172;CL:0000988!9.80e-42!182;CL:0002032!1.38e-40!165;CL:0000837!1.38e-40!165;CL:0000738!1.40e-39!140;CL:0002031!6.48e-33!124;CL:0002087!1.14e-32!119;CL:0000763!1.33e-21!112;CL:0000049!1.33e-21!112;CL:0000766!3.89e-20!76;CL:0000838!1.47e-18!52;CL:0000542!6.80e-18!53;CL:0000051!6.80e-18!53;CL:0000860!1.89e-17!45;CL:0002057!6.18e-17!42;CL:0000557!3.62e-16!71;CL:0000839!1.03e-14!70;CL:0002194!6.31e-13!63;CL:0000576!6.31e-13!63;CL:0000040!6.31e-13!63;CL:0000559!6.31e-13!63;CL:0002009!8.33e-13!65;CL:0000084!4.04e-10!25;CL:0000827!4.04e-10!25;CL:0000791!4.61e-09!18;CL:0000789!4.61e-09!18;CL:0002420!4.61e-09!18;CL:0002419!4.61e-09!18;CL:0000790!4.61e-09!18;CL:0000134!1.28e-08!358;CL:0002393!2.93e-08!9;CL:0002397!2.93e-08!9;CL:0002320!8.85e-08!365;CL:0000945!1.68e-07!24;CL:0000826!1.68e-07!24;CL:0000236!3.82e-07!14;CL:0000624!8.61e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.34e-17;8!CL:0000624;2.51e-16;6!CL:0000576;3.04e-14;48!CL:0000860;3.17e-14;33!CL:0002057;3.17e-14;33!CL:0000766;5.63e-14;69!CL:0000791;1.45e-13;18!CL:0000789;1.45e-13;18!CL:0002419;1.45e-13;18!CL:0000084;4.90e-13;25!CL:0002087;5.21e-13;104!CL:0000081;4.40e-12;11!CL:0000738;7.45e-12;136!CL:0000542;2.80e-11;53!CL:0000763;2.04e-10;100!CL:0000988;4.99e-10;177!CL:0000623;1.26e-09;3!CL:0000767;3.21e-09;3!CL:0000473;3.91e-09;39!CL:0000234;3.91e-09;39!CL:0000226;9.51e-09;3!CL:0000842;9.51e-09;3!CL:0000898;1.36e-08;3!CL:0002393;2.12e-07;6!CL:0002397;2.12e-07;6!CL:0000771;5.09e-07;2!CL:0000236;7.34e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.45e-53,168;CL:0000988,4.75e-50,177;CL:0000738,7.12e-50,136;CL:0002032,1.47e-48,161;CL:0000837,1.47e-48,161;CL:0002087,2.71e-38,115;CL:0002031,4.09e-36,120;CL:0000766,4.58e-30,72;CL:0000763,5.71e-29,108;CL:0000049,5.71e-29,108;CL:0000860,2.40e-23,42;CL:0002057,2.40e-23,42;CL:0000557,5.29e-20,67;CL:0000473,1.10e-19,48;CL:0000234,1.10e-19,48;CL:0000839,1.35e-18,66;CL:0000838,7.33e-18,52;CL:0000542,2.05e-17,53;CL:0000051,2.05e-17,53;CL:0000134,3.76e-17,354;CL:0000094,3.90e-17,8;CL:0002320,1.63e-16,361;CL:0000624,1.77e-16,6;CL:0002194,3.64e-16,59;CL:0000576,3.64e-16,59;CL:0000040,3.64e-16,59;CL:0000559,3.64e-16,59;CL:0002009,1.89e-15,61;CL:0000219,2.83e-14,386;CL:0000791,1.25e-13,18;CL:0000789,1.25e-13,18;CL:0002420,1.25e-13,18;CL:0002419,1.25e-13,18;CL:0000790,1.25e-13,18;CL:0000084,3.54e-13,25;CL:0000827,3.54e-13,25;CL:0000034,3.51e-12,441;CL:0000081,4.08e-12,11;CL:0000048,1.50e-11,427;CL:0000723,3.56e-11,433;CL:0002393,3.84e-10,9;CL:0002397,3.84e-10,9;CL:0000623,1.39e-09,3;CL:0000825,1.39e-09,3;CL:0000767,2.78e-09,3;CL:0000898,9.32e-09,3;CL:0000226,1.01e-08,3;CL:0000842,1.01e-08,3;CL:0000771,5.18e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.85e-15;42!CL:0000790;1.45e-13;18!CL:0000051;2.80e-11;53!CL:0000049;1.02e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.72e-19!112;UBERON:0002390!2.17e-18!102;UBERON:0003061!2.17e-18!102;UBERON:0002371!2.92e-13!80;UBERON:0001474!7.73e-12!86;UBERON:0002405!1.27e-10!115;UBERON:0004765!1.47e-08!101;UBERON:0001434!1.47e-08!101;UBERON:0002384!6.65e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-20,98;UBERON:0003061,1.45e-20,98;UBERON:0002371,2.86e-18,76;UBERON:0002193,7.52e-18,108;UBERON:0001474,2.05e-16,82;UBERON:0002384,1.20e-15,371;UBERON:0002405,6.20e-15,93;UBERON:0004765,2.49e-14,90;UBERON:0001434,3.31e-12,100 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.246301768349837,0.0787107813136792,3.93364276848904,4.60595277716655,5.41856431606266,0,0.30120591877825,0,0.232401601740905,0.284338464974843,1.17440175733939,3.32397245119126,3.20871115952227,4.34021741431704,0,0.32389366601898,0,1.16318591023652,0.755751887377619,1.94067248950253,0.232429036905685,0.822335776043652,0,1.43846196161075,2.56160706529101,0.709446689665756,0,0,0,1.31769637679823,1.36453075028923,0.224723484445085,1.22433556948361,1.28371610830437,0,2.63881040149373,3.19141852194611,4.26224750532694,0.580418477257168,1.13477044938228,0,1.50749199154046,3.12889751052121,1.08594422352558,0.605399502633369,0,0,0.845021145247767,1.70083439972035,0.628975936525128,0.44931452458598,1.05123824989054,0.16072558669708,1.14005097496499,3.9783335439818,0.91332076882317,1.75996244461323,1.63841583378639,0,2.13365111283254,0.800791974072025,0.574752439954483,0.661044872784862,0,4.55370375287559,10.5702694086769,3.82273228125229,11.8954195721123,6.72610275577843,0.263384084775077,5.31116379307349,4.71612915298998,6.37364646898479,0.668745981562712,1.95553359980154,0.946895611469467,0,1.33692548262208,3.53527088969805,1.77227115666897,2.97884250141517,0.768547918354051,0.130059347559878,0.164437904603676,0.552700035571697,1.73881851441031,0.889719378972363,0.802622484269139,1.04535523804977,0.566546713487831,3.06576394881537,1.71813722741315,1.26509846009751,0.318565414324097,0,0,0.301150238155546,0,1.24930726552346,0.710331756132051,0.821127996921047,8.66908995866349,6.95344509037119,5.93780055919476,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0,0.130979075497713,0,0,0,0,0.797747763113191,1.43094374583205,0,0.74291500265913,0.596287222100115,0,0.694281003215189,0.56530794192401,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,6.58902087180316,7.75560528296651,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.925971025153221,0,0,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0,43.847028172739,1.32072651019839,0.414656231081544,1.29707958075265,0.37872730027914,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,6.69904584686553,6.03757209606648,6.54549485026717,0,0,0,0,0,4.49404214368309,0,6.63064821497657,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,3.51505644408909,2.15714200818617,2.45473382947922,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,0,0,0.714695326373367,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0.28853842595289,0.355709216742071,0.318852545457645,0.199579371432817,0,1.2700414963433,0.973865820823666,0.561594356226918,1.14117339516596,0,0,0,0.321176150207399,0.201799707191048,0,0.687010689511529,0,0.447352215784832,0.500547425135725,0.586164286206121,0,1.23087398947712,0,1.33228787199128,2.81974010175699,0,0,0.121360521749513,0.222886768554957,0,0,0.296964680832639,0,0.994147647766298,0,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.262379999988587,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0.627921025580099,1.32969345520125,0,0,0,0,1.27149263184303,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.208843899010911,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0.31593289814244,0.450970258243478,0,0,0,0,0,0,0,0.347119476670262,0.293977192243133,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0.146178634172371,0.164230914106418,0.0969890164884194,0.353024506766001,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0.942776138467182,0,0.209205692624666,0,0,0,0,3.83239764200917,0,1.57732412567589,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.21357482513538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| |||
|short_description=p9@RNF38 | |||
}} |
Latest revision as of 09:47, 17 September 2015
Short description: | p9@RNF38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RNF38_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 154bp_to_ENST00000377877_5end |
EntrezGene: | RNF38 |
HGNC: | 18052 |
UniProt: | B1AM81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-20 | 98 |
blood island | 1.45e-20 | 98 |
bone marrow | 2.86e-18 | 76 |
hemolymphoid system | 7.52e-18 | 108 |
bone element | 2.05e-16 | 82 |
connective tissue | 1.20e-15 | 371 |
immune system | 6.20e-15 | 93 |
skeletal element | 2.49e-14 | 90 |
skeletal system | 3.31e-12 | 100 |