FFCP PHASE1:Mm9::chr11:116442789..116442827,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:116442789..116442827,-
|short_description=p2@Ube2o
|description=CAGE_peak_2_at_Ube2o_5end
|association_with_transcript=-28bp_to_ENSMUST00000082152,NM_1737...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217342 | |EntrezGene=217342 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6ZPJ3 | |UniProt=Q6ZPJ3 | ||
|association_with_transcript=-28bp_to_ENSMUST00000082152,NM_173755,uc007mln.1_5end | |||
|cluster_id=chr11:116442789..116442827,- | |||
|description=CAGE_peak_2_at_Ube2o_5end | |||
|id=chr11:116442789..116442827,- | |||
|ontology_enrichment_celltype=CL:0000540!4.97e-13!33;CL:0000047!4.97e-13!33;CL:0000031!4.97e-13!33;CL:0000404!4.97e-13!33;CL:0000117!1.72e-12!23;CL:0000337!1.72e-12!23;CL:0000393!7.73e-12!39;CL:0000211!7.73e-12!39;CL:0002319!6.01e-11!43;CL:0000221!8.20e-11!44;CL:0000133!8.20e-11!44;CL:0000055!1.24e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.96e-13,33;CL:0000047,4.96e-13,33;CL:0000031,4.96e-13,33;CL:0000404,4.96e-13,33;CL:0000117,1.72e-12,23;CL:0000337,1.72e-12,23;CL:0000393,7.72e-12,39;CL:0000211,7.72e-12,39;CL:0002319,6.00e-11,43;CL:0000221,8.19e-11,44;CL:0000133,8.19e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.29e-27!73;UBERON:0005743!3.29e-27!73;UBERON:0000073!1.38e-25!75;UBERON:0001016!1.38e-25!75;UBERON:0001049!6.70e-22!52;UBERON:0005068!6.70e-22!52;UBERON:0006241!6.70e-22!52;UBERON:0007135!6.70e-22!52;UBERON:0000955!2.88e-21!50;UBERON:0006238!2.88e-21!50;UBERON:0002346!8.37e-21!71;UBERON:0003075!8.37e-21!71;UBERON:0007284!8.37e-21!71;UBERON:0002616!1.43e-20!49;UBERON:0004121!2.34e-20!102;UBERON:0000924!2.34e-20!102;UBERON:0006601!2.34e-20!102;UBERON:0000033!1.28e-19!63;UBERON:0002020!3.47e-17!34;UBERON:0003056!2.22e-16!49;UBERON:0003080!2.76e-16!40;UBERON:0002780!1.29e-15!39;UBERON:0001890!1.29e-15!39;UBERON:0006240!1.29e-15!39;UBERON:0002791!1.43e-14!29;UBERON:0003528!1.43e-14!29;UBERON:0001893!1.43e-14!29;UBERON:0000025!1.44e-12!114;UBERON:0004111!9.70e-12!122;UBERON:0000153!2.21e-11!94;UBERON:0007811!2.53e-11!86;UBERON:0000956!2.61e-10!21;UBERON:0001869!2.61e-10!21;UBERON:0000203!2.61e-10!21;UBERON:0002619!1.99e-08!17;UBERON:0000477!1.15e-07!154;UBERON:0000468!1.58e-07!333;UBERON:0000475!2.99e-07!200;UBERON:0002021!3.05e-07!10;UBERON:0000411!3.05e-07!10;UBERON:0001950!3.05e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.28e-27,73;UBERON:0001016,1.37e-25,75;UBERON:0000073,2.20e-23,54;UBERON:0002346,1.55e-22,64;UBERON:0003075,1.55e-22,64;UBERON:0007284,1.55e-22,64;UBERON:0001049,6.68e-22,52;UBERON:0005068,6.68e-22,52;UBERON:0006241,6.68e-22,52;UBERON:0007135,6.68e-22,52;UBERON:0004121,2.42e-21,95;UBERON:0000924,2.42e-21,95;UBERON:0006601,2.42e-21,95;UBERON:0000955,3.16e-19,47;UBERON:0006238,3.16e-19,47;UBERON:0002616,1.51e-18,46;UBERON:0010371,2.32e-18,73;UBERON:0010314,1.55e-17,92;UBERON:0002020,3.46e-17,34;UBERON:0003056,2.21e-16,49;UBERON:0003080,2.76e-16,40;UBERON:0002780,1.28e-15,39;UBERON:0001890,1.28e-15,39;UBERON:0006240,1.28e-15,39;UBERON:0003528,1.43e-14,29;UBERON:0002791,1.43e-14,29;UBERON:0001893,1.43e-14,29;UBERON:0000025,1.43e-12,114;UBERON:0004111,9.68e-12,122;UBERON:0000956,2.60e-10,21;UBERON:0001869,2.60e-10,21;UBERON:0000203,2.60e-10,21;UBERON:0002619,1.99e-08,17;UBERON:0000922,2.77e-07,320;UBERON:0002021,3.05e-07,10;UBERON:0000411,3.05e-07,10;UBERON:0001950,3.05e-07,10 | |||
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| ||
|short_description=p2@Ube2o | |||
}} | }} |
Latest revision as of 00:24, 27 September 2015
Short description: | p2@Ube2o |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ube2o_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -28bp_to_ENSMUST00000082152, NM_173755, uc007mln.1_5end |
EntrezGene: | Ube2o |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.96e-13 | 33 |
neuronal stem cell | 4.96e-13 | 33 |
neuroblast | 4.96e-13 | 33 |
electrically signaling cell | 4.96e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.72e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-12 | 23 |
electrically responsive cell | 7.72e-12 | 39 |
electrically active cell | 7.72e-12 | 39 |
neural cell | 6.00e-11 | 43 |
ectodermal cell | 8.19e-11 | 44 |
neurectodermal cell | 8.19e-11 | 44 |