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FFCP PHASE1:Mm9::chrX:131252469..131252480,+: Difference between revisions

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{{FFCP|EntrezGene=78248|HGNC=|MCL_coexpression_id=361|UniProt=A2AKS2,Q9CX83|association_with_transcript=0bp_to_NM_001166377,NM_001166378,NM_001166379,NM_001166380,NM_030066,uc009ugj.2,uc009ugk.2,uc009ugl.2,uc009ugm.2,uc012hol.1_5end|description=CAGE_peak_2_at_Armcx1_5end|id=chrX:131252469..131252480,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.19e-14!71;UBERON:0003075!2.19e-14!71;UBERON:0007284!2.19e-14!71;UBERON:0004121!7.77e-14!102;UBERON:0000924!7.77e-14!102;UBERON:0006601!7.77e-14!102;UBERON:0000033!1.08e-12!63;UBERON:0001017!1.53e-12!73;UBERON:0005743!1.53e-12!73;UBERON:0000073!1.74e-12!75;UBERON:0001016!1.74e-12!75;UBERON:0000955!2.04e-11!50;UBERON:0006238!2.04e-11!50;UBERON:0001049!3.49e-11!52;UBERON:0005068!3.49e-11!52;UBERON:0006241!3.49e-11!52;UBERON:0007135!3.49e-11!52;UBERON:0002616!6.94e-11!49;UBERON:0003056!8.37e-11!49;UBERON:0000025!9.19e-10!114;UBERON:0003080!8.99e-09!40;UBERON:0004111!1.81e-08!122;UBERON:0002780!3.29e-08!39;UBERON:0001890!3.29e-08!39;UBERON:0006240!3.29e-08!39;UBERON:0002021!1.82e-07!10;UBERON:0000411!1.82e-07!10;UBERON:0001950!1.82e-07!10;UBERON:0000468!3.35e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.63e-16,92;UBERON:0002346,4.40e-13,64;UBERON:0003075,4.40e-13,64;UBERON:0007284,4.40e-13,64;UBERON:0010371,2.07e-12,73;UBERON:0004121,3.02e-12,95;UBERON:0000924,3.02e-12,95;UBERON:0006601,3.02e-12,95;UBERON:0001017,5.04e-12,73;UBERON:0001016,5.60e-12,75;UBERON:0000073,4.42e-11,54;UBERON:0001049,1.47e-10,52;UBERON:0005068,1.47e-10,52;UBERON:0006241,1.47e-10,52;UBERON:0007135,1.47e-10,52;UBERON:0003056,5.14e-10,49;UBERON:0000955,1.04e-09,47;UBERON:0006238,1.04e-09,47;UBERON:0002616,3.43e-09,46;UBERON:0000025,6.13e-09,114;UBERON:0003080,5.95e-08,40;UBERON:0004111,1.04e-07,122;UBERON:0002021,1.09e-07,10;UBERON:0000411,1.09e-07,10;UBERON:0001950,1.09e-07,10;UBERON:0002780,2.12e-07,39;UBERON:0001890,2.12e-07,39;UBERON:0006240,2.12e-07,39|phase1_expression=3.36312578920067,1.04692622291808,0,0,0,0,0.934450562382103,0.258246646883153,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,2.55129870453209,0,0,0.159992422793407,0.68822784320151,0,0,0.861884930743556,0,0,0.221730510655305,0.635030673459631,0,0,1.1554064790051,0.332469290716985,0.204169356262369,0,0,0,0,0,0.485510353031154,5.16176953699867,4.1564541800001,4.40512205188036,1.56478268869608,0,0.439372365468944,0.972149495371417,0.979904951377538,0,0,0,0,3.08711323243136,4.29800159908135,4.12537673821954,1.21389876515759,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,1.24427534770173,1.62007125998029,1.26194976810829,1.99955689082663,2.42955395046775,0.857435594504678,0.958454710182364,0.919218786610021,2.20231761998777,7.15049093277051,8.75557239560588,0.923204014111357,1.55528994124096,1.56274011167028,6.97957497503452,4.50210088025344,6.1119299110724,3.83017161115768,3.41692033917847,2.42319279572891,1.4387976733305,2.72057616384428,2.6087803983151,0.860423876981386,0,0,0,0.448026887097336,0.842666520790511,3.74946709671727,3.63700406444016,1.7666978725517,1.54927761754349,1.28326477414318,7.64415719119937,0,0.432982082022428,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,2.52351636410202,2.08182392119363,1.82679286987285,2.7673859670727,3.16517545160507,2.4693628498498,2.89033160058254,0.247194967734374,2.4581890676385,0,1.7794353494215,1.54589062922275,0.484875253135222,0,4.9772735491963,5.65506108396329,0.510914110417183,0.359445373517761,0,0.254140454146129,13.1815762676244,9.15001205637253,3.5183218591602,9.21268897019065,11.7629110371952,10.1816141834184,9.40999325792994,3.1570202793598,1.61729061793121,3.0326731012041,1.68353484709179,2.99277018814219,2.5289231487682,3.24111833649629,3.76762044589288,2.85753296435577,3.33095672740609,2.90475346135159,5.95017752699736,1.72454394346274,1.32374256117473,1.93546236580344,2.84954452155847,2.78047249225598,4.52727816478817,4.11564272815887,4.17971960318836,0,0,0,2.89976081549703,2.81431271977315,2.16074473753218,3.78791576936336,2.95146347621106,3.23960937063494,3.0229412817553,3.75582761959467,1.98501082024188,3.12663714835613,1.80584210487005,1.4592385718254,1.46199987425332,1.53685080703735,1.20785776884335,7.36014819974445,3.49875682089567,0.330418782983798,0.264450566663544,3.41261200856374,2.55460339046482,2.70621668776396,2.62188582010345,3.55804870151792,2.85338439168839,0.474529061544512,2.63518327558417,1.50801125280162,1.39269530428806,0.974820435595601,0.898819408654221,0,1.59313018603494,0.948339504765408,2.97046132785295,1.1270773567308,1.62921062276251,3.29719228184964,2.17421041659988,1.83385957660346,2.06654207171443,2.511979645462,2.34454611451421,0,0.667380422864376,0.786235980452812,0.224862112384854,0.811440485554012,0.482354319504834,0.25462585178142,0.575392274901621,0.972811360650212,0.274561413188081,2.875364130547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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=78248
|HGNC=
|MCL_coexpression_id=361
|TSSclassifier=NA
|UniProt=A2AKS2,Q9CX83
|association_with_transcript=0bp_to_NM_001166377,NM_001166378,NM_001166379,NM_001166380,NM_030066,uc009ugj.2,uc009ugk.2,uc009ugl.2,uc009ugm.2,uc012hol.1_5end
|cluster_id=chrX:131252469..131252480,+
|description=CAGE_peak_2_at_Armcx1_5end
|id=chrX:131252469..131252480,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.19e-14!71;UBERON:0003075!2.19e-14!71;UBERON:0007284!2.19e-14!71;UBERON:0004121!7.77e-14!102;UBERON:0000924!7.77e-14!102;UBERON:0006601!7.77e-14!102;UBERON:0000033!1.08e-12!63;UBERON:0001017!1.53e-12!73;UBERON:0005743!1.53e-12!73;UBERON:0000073!1.74e-12!75;UBERON:0001016!1.74e-12!75;UBERON:0000955!2.04e-11!50;UBERON:0006238!2.04e-11!50;UBERON:0001049!3.49e-11!52;UBERON:0005068!3.49e-11!52;UBERON:0006241!3.49e-11!52;UBERON:0007135!3.49e-11!52;UBERON:0002616!6.94e-11!49;UBERON:0003056!8.37e-11!49;UBERON:0000025!9.19e-10!114;UBERON:0003080!8.99e-09!40;UBERON:0004111!1.81e-08!122;UBERON:0002780!3.29e-08!39;UBERON:0001890!3.29e-08!39;UBERON:0006240!3.29e-08!39;UBERON:0002021!1.82e-07!10;UBERON:0000411!1.82e-07!10;UBERON:0001950!1.82e-07!10;UBERON:0000468!3.35e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.63e-16,92;UBERON:0002346,4.40e-13,64;UBERON:0003075,4.40e-13,64;UBERON:0007284,4.40e-13,64;UBERON:0010371,2.07e-12,73;UBERON:0004121,3.02e-12,95;UBERON:0000924,3.02e-12,95;UBERON:0006601,3.02e-12,95;UBERON:0001017,5.04e-12,73;UBERON:0001016,5.60e-12,75;UBERON:0000073,4.42e-11,54;UBERON:0001049,1.47e-10,52;UBERON:0005068,1.47e-10,52;UBERON:0006241,1.47e-10,52;UBERON:0007135,1.47e-10,52;UBERON:0003056,5.14e-10,49;UBERON:0000955,1.04e-09,47;UBERON:0006238,1.04e-09,47;UBERON:0002616,3.43e-09,46;UBERON:0000025,6.13e-09,114;UBERON:0003080,5.95e-08,40;UBERON:0004111,1.04e-07,122;UBERON:0002021,1.09e-07,10;UBERON:0000411,1.09e-07,10;UBERON:0001950,1.09e-07,10;UBERON:0002780,2.12e-07,39;UBERON:0001890,2.12e-07,39;UBERON:0006240,2.12e-07,39
|phase1_expression=3.36312578920067,1.04692622291808,0,0,0,0,0.934450562382103,0.258246646883153,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0,2.55129870453209,0,0,0.159992422793407,0.68822784320151,0,0,0.861884930743556,0,0,0.221730510655305,0.635030673459631,0,0,1.1554064790051,0.332469290716985,0.204169356262369,0,0,0,0,0,0.485510353031154,5.16176953699867,4.1564541800001,4.40512205188036,1.56478268869608,0,0.439372365468944,0.972149495371417,0.979904951377538,0,0,0,0,3.08711323243136,4.29800159908135,4.12537673821954,1.21389876515759,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,1.24427534770173,1.62007125998029,1.26194976810829,1.99955689082663,2.42955395046775,0.857435594504678,0.958454710182364,0.919218786610021,2.20231761998777,7.15049093277051,8.75557239560588,0.923204014111357,1.55528994124096,1.56274011167028,6.97957497503452,4.50210088025344,6.1119299110724,3.83017161115768,3.41692033917847,2.42319279572891,1.4387976733305,2.72057616384428,2.6087803983151,0.860423876981386,0,0,0,0.448026887097336,0.842666520790511,3.74946709671727,3.63700406444016,1.7666978725517,1.54927761754349,1.28326477414318,7.64415719119937,0,0.432982082022428,0.253359865475099,0.505524445014783,0.22836775943812,0.517875767294343,2.52351636410202,2.08182392119363,1.82679286987285,2.7673859670727,3.16517545160507,2.4693628498498,2.89033160058254,0.247194967734374,2.4581890676385,0,1.7794353494215,1.54589062922275,0.484875253135222,0,4.9772735491963,5.65506108396329,0.510914110417183,0.359445373517761,0,0.254140454146129,13.1815762676244,9.15001205637253,3.5183218591602,9.21268897019065,11.7629110371952,10.1816141834184,9.40999325792994,3.1570202793598,1.61729061793121,3.0326731012041,1.68353484709179,2.99277018814219,2.5289231487682,3.24111833649629,3.76762044589288,2.85753296435577,3.33095672740609,2.90475346135159,5.95017752699736,1.72454394346274,1.32374256117473,1.93546236580344,2.84954452155847,2.78047249225598,4.52727816478817,4.11564272815887,4.17971960318836,0,0,0,2.89976081549703,2.81431271977315,2.16074473753218,3.78791576936336,2.95146347621106,3.23960937063494,3.0229412817553,3.75582761959467,1.98501082024188,3.12663714835613,1.80584210487005,1.4592385718254,1.46199987425332,1.53685080703735,1.20785776884335,7.36014819974445,3.49875682089567,0.330418782983798,0.264450566663544,3.41261200856374,2.55460339046482,2.70621668776396,2.62188582010345,3.55804870151792,2.85338439168839,0.474529061544512,2.63518327558417,1.50801125280162,1.39269530428806,0.974820435595601,0.898819408654221,0,1.59313018603494,0.948339504765408,2.97046132785295,1.1270773567308,1.62921062276251,3.29719228184964,2.17421041659988,1.83385957660346,2.06654207171443,2.511979645462,2.34454611451421,0,0.667380422864376,0.786235980452812,0.224862112384854,0.811440485554012,0.482354319504834,0.25462585178142,0.575392274901621,0.972811360650212,0.274561413188081,2.87536413054709,1.48856379067401,1.5601883655728,0.252578877947112,0.538192240565737,0,2.77129785249907,1.89491411770485,2.93336957595647,3.90413697282933,2.58159273117352,2.51259386162724,2.61848004974615,1.75620283072019,3.62560831444239,4.65075848262427,3.6674596791222,3.76885623846197,2.41758974612254,1.44649058581512,0,0,0.983528546038072,2.20749397043786,12.6834966090356,11.8383803458125,2.29508923527346,2.27223834483936,2.2085575359138,1.56175497718655,5.60100834105277,4.54040716109849,5.12436950389506,3.39691836946599,2.83367491172426,3.50707029493574,5.13874111330481,7.39039027770156,2.41298144854057,3.20518086601059,2.11753047159649,1.81467135269789,2.65490276679926,1.69946445308487,2.11626489875326,1.88605079755898,0.885905678642318,2.76691633149535,2.58428293168221,2.90826983582004,1.42598951353889,1.26414703174326,2.10837217149998,0,7.14923172082955,3.42116078659489,1.81102157295856,2.57204442037911,3.3694644392032,3.56737635204141,3.78462747384878,1.2178597964584,0.23467170806371,1.27099242518292,1.54369878638473,2.14352128823924,2.26050197374268,1.99032652262914,1.3130957840345,2.1338316966858,0.874442509889552,8.90041449650446,0,1.857481811669,2.03713980106683,1.88368457004691,1.0935538217682,0.457556346413045,0.679913719975421,0.979660166265606,0.414599921413271,1.90934123603023,1.58167996790568,2.03319467126849,1.83609079397062,2.92723614420256,1.9652630737156,2.56242258131159,1.73572257023205,1.04702376793612,0.90730481304255,1.24267862617385,0,1.34564891439581,2.31641886639937,2.72231663681667,1.16243841129958,3.37912250981556,1.99507305697782,2.604087696879,2.09718688851422,0.483168241652012,0,0.948033361884535,0.202725215290164,1.95150818613172,1.03936658382236,0.179026695667481,0.79472541912506,0.721172697119813,0.443068581523732,0.504832249740738,0.990688486514998,1.00826185136841,0.38983152295901,0.577271049841977,0.584384510907845,0.226730383615211,0,0,0.167884616364078,1.15913756419314,2.25218970541418,1.28206136987086,0.643105137237198,0,4.51801474093653,7.36520378411483,5.72895513439397,6.70227411140382,7.53590771747707,10.5755145634558,9.45031500324528,11.2580300806055,9.5159905886683,8.80192529978094,2.80225838477277,2.79317411380722,3.07320490357441,2.67417388775123,3.35381060204772,1.65459157605013,1.77797382241292,3.29656091582231,1.92551525755089,1.51618327058278,2.78827229879264,1.88626341386076,1.68554713445788,1.53660365771686,2.01024141344646,2.85776214769844,2.20180219295225,1.35036454324594,4.53294490883637,2.94397840268795,1.37147700954166,3.19456451086807,2.62279808942053,2.32554266611726,3.29382831453657,2.62305284464197,1.28049581010941,3.15683653725411,2.58027816307137,3.36685362994643,1.89816028998679,1.67457620038458,2.86461730218783,1.08455788830176,2.89359916471712,3.2475375131933,3.04111090979031,1.93383948643468,2.10417165275728,1.76473135295612,2.78241402744506
|short_description=p2@Armcx1
}}

Latest revision as of 14:20, 1 October 2015

Short description:p2@Armcx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Armcx1_5end
Coexpression cluster:MCL_coexpression_mm9:361
Association with transcript: 0bp_to_NM_001166377, NM_001166378, NM_001166379, NM_001166380, NM_030066, uc009ugj.2, uc009ugk.2, uc009ugl.2, uc009ugm.2, uc012hol.1_5end
EntrezGene:Armcx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Armcx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A413.18
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F211.76
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B29.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D43.77
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.62
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C212.68
medulla oblongata, neonate N30.CNhs11200.1396-42A311.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H31.99
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I42.60
testis, neonate N10.CNhs11204.763-44D92.10
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest3.63e-1692
neurectoderm4.40e-1364
neural plate4.40e-1364
presumptive neural plate4.40e-1364
ecto-epithelium2.07e-1273
ectoderm-derived structure3.02e-1295
ectoderm3.02e-1295
presumptive ectoderm3.02e-1295
central nervous system5.04e-1273
nervous system5.60e-1275
regional part of nervous system4.42e-1154
neural tube1.47e-1052
neural rod1.47e-1052
future spinal cord1.47e-1052
neural keel1.47e-1052
pre-chordal neural plate5.14e-1049
brain1.04e-0947
future brain1.04e-0947
regional part of brain3.43e-0946
tube6.13e-09114
anterior neural tube5.95e-0840
anatomical conduit1.04e-07122
occipital lobe1.09e-0710
visual cortex1.09e-0710
neocortex1.09e-0710
regional part of forebrain2.12e-0739
forebrain2.12e-0739
future forebrain2.12e-0739
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