FFCP PHASE1:Mm9::chr12:101441843..101441883,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:101441843..101441883,+
|short_description=p@chr12:101441843..101441883,+
|description=CAGE_peak_at_chr12:101441843..101441883,+
|association_with_transcri...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1098 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:101441843..101441883,+ | |||
|description=CAGE_peak_at_chr12:101441843..101441883,+ | |||
|id=chr12:101441843..101441883,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.47e-08!23;CL:0000337!3.47e-08!23;CL:0000540!1.42e-07!33;CL:0000047!1.42e-07!33;CL:0000031!1.42e-07!33;CL:0000404!1.42e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-08,23;CL:0000337,3.22e-08,23;CL:0000540,1.53e-07,33;CL:0000047,1.53e-07,33;CL:0000031,1.53e-07,33;CL:0000404,1.53e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.91e-13!34;UBERON:0001017!2.35e-12!73;UBERON:0005743!2.35e-12!73;UBERON:0000073!3.79e-12!75;UBERON:0001016!3.79e-12!75;UBERON:0001049!6.47e-12!52;UBERON:0005068!6.47e-12!52;UBERON:0006241!6.47e-12!52;UBERON:0007135!6.47e-12!52;UBERON:0000955!2.36e-11!50;UBERON:0006238!2.36e-11!50;UBERON:0002616!5.98e-11!49;UBERON:0002791!2.45e-10!29;UBERON:0003528!2.45e-10!29;UBERON:0001893!2.45e-10!29;UBERON:0003080!3.23e-09!40;UBERON:0002780!7.39e-09!39;UBERON:0001890!7.39e-09!39;UBERON:0006240!7.39e-09!39;UBERON:0000033!1.03e-08!63;UBERON:0002346!2.36e-08!71;UBERON:0003075!2.36e-08!71;UBERON:0007284!2.36e-08!71;UBERON:0002021!4.34e-08!10;UBERON:0000411!4.34e-08!10;UBERON:0001950!4.34e-08!10;UBERON:0003056!9.52e-08!49;UBERON:0000956!2.33e-07!21;UBERON:0001869!2.33e-07!21;UBERON:0000203!2.33e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.25e-13,54;UBERON:0002020,1.04e-12,34;UBERON:0001017,2.00e-12,73;UBERON:0001016,3.22e-12,75;UBERON:0001049,7.03e-12,52;UBERON:0005068,7.03e-12,52;UBERON:0006241,7.03e-12,52;UBERON:0007135,7.03e-12,52;UBERON:0003528,2.61e-10,29;UBERON:0002791,2.61e-10,29;UBERON:0001893,2.61e-10,29;UBERON:0011216,2.87e-10,194;UBERON:0002346,3.20e-10,64;UBERON:0003075,3.20e-10,64;UBERON:0007284,3.20e-10,64;UBERON:0000955,1.03e-09,47;UBERON:0006238,1.03e-09,47;UBERON:0002616,2.52e-09,46;UBERON:0003080,3.32e-09,40;UBERON:0002780,7.62e-09,39;UBERON:0001890,7.62e-09,39;UBERON:0006240,7.62e-09,39;UBERON:0002021,4.02e-08,10;UBERON:0000411,4.02e-08,10;UBERON:0001950,4.02e-08,10;UBERON:0000160,6.78e-08,31;UBERON:0003056,9.75e-08,49;UBERON:0004121,1.05e-07,95;UBERON:0000924,1.05e-07,95;UBERON:0006601,1.05e-07,95;UBERON:0010371,2.54e-07,73;UBERON:0000956,2.55e-07,21;UBERON:0001869,2.55e-07,21;UBERON:0000203,2.55e-07,21 | |||
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| 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| ||
|short_description=p@chr12:101441843..101441883,+ | |||
}} | }} |
Latest revision as of 14:03, 4 August 2015
Short description: | p@chr12:101441843..101441883, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:101441843..101441883, + |
Coexpression cluster: | MCL_coexpression_mm9:1098 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.22e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-08 | 23 |
neuron | 1.53e-07 | 33 |
neuronal stem cell | 1.53e-07 | 33 |
neuroblast | 1.53e-07 | 33 |
electrically signaling cell | 1.53e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.25e-13 | 54 |
gray matter | 1.04e-12 | 34 |
central nervous system | 2.00e-12 | 73 |
nervous system | 3.22e-12 | 75 |
neural tube | 7.03e-12 | 52 |
neural rod | 7.03e-12 | 52 |
future spinal cord | 7.03e-12 | 52 |
neural keel | 7.03e-12 | 52 |
brain grey matter | 2.61e-10 | 29 |
regional part of telencephalon | 2.61e-10 | 29 |
telencephalon | 2.61e-10 | 29 |
organ system subdivision | 2.87e-10 | 194 |
neurectoderm | 3.20e-10 | 64 |
neural plate | 3.20e-10 | 64 |
presumptive neural plate | 3.20e-10 | 64 |
brain | 1.03e-09 | 47 |
future brain | 1.03e-09 | 47 |
regional part of brain | 2.52e-09 | 46 |
anterior neural tube | 3.32e-09 | 40 |
regional part of forebrain | 7.62e-09 | 39 |
forebrain | 7.62e-09 | 39 |
future forebrain | 7.62e-09 | 39 |
occipital lobe | 4.02e-08 | 10 |
visual cortex | 4.02e-08 | 10 |
neocortex | 4.02e-08 | 10 |
intestine | 6.78e-08 | 31 |
pre-chordal neural plate | 9.75e-08 | 49 |
ectoderm-derived structure | 1.05e-07 | 95 |
ectoderm | 1.05e-07 | 95 |
presumptive ectoderm | 1.05e-07 | 95 |
ecto-epithelium | 2.54e-07 | 73 |
cerebral cortex | 2.55e-07 | 21 |
cerebral hemisphere | 2.55e-07 | 21 |
pallium | 2.55e-07 | 21 |