FFCP PHASE1:Mm9::chr15:81641878..81641921,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:81641878..81641921,+
|short_description=p1@Tef
|description=CAGE_peak_1_at_Tef_5end
|association_with_transcript=34bp_to_ENSMUST00000023024,NM_017376,uc00...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21685 | |EntrezGene=21685 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=780 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JLC6 | |UniProt=Q9JLC6 | ||
|association_with_transcript=34bp_to_ENSMUST00000023024,NM_017376,uc007wxk.2_5end | |||
|cluster_id=chr15:81641878..81641921,+ | |||
|description=CAGE_peak_1_at_Tef_5end | |||
|id=chr15:81641878..81641921,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.60e-13,95;UBERON:0000924,1.60e-13,95;UBERON:0006601,1.60e-13,95;UBERON:0001017,4.17e-13,73;UBERON:0001016,1.16e-12,75;UBERON:0000073,4.79e-11,54;UBERON:0000955,4.25e-10,47;UBERON:0006238,4.25e-10,47;UBERON:0001049,4.34e-10,52;UBERON:0005068,4.34e-10,52;UBERON:0006241,4.34e-10,52;UBERON:0007135,4.34e-10,52;UBERON:0010371,6.01e-10,73;UBERON:0002616,1.37e-09,46;UBERON:0002346,4.19e-09,64;UBERON:0003075,4.19e-09,64;UBERON:0007284,4.19e-09,64;UBERON:0004111,1.61e-08,122;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0007023,8.79e-08,51;UBERON:0010314,1.14e-07,92;UBERON:0003080,2.35e-07,40;UBERON:0000025,6.49e-07,114;UBERON:0002780,6.60e-07,39;UBERON:0001890,6.60e-07,39;UBERON:0006240,6.60e-07,39;UBERON:0002619,9.21e-07,17 | |||
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| ||
|short_description=p1@Tef | |||
}} | }} |
Latest revision as of 04:24, 27 September 2015
Short description: | p1@Tef |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tef_5end |
Coexpression cluster: | MCL_coexpression_mm9:780 |
Association with transcript: | 34bp_to_ENSMUST00000023024, NM_017376, uc007wxk.2_5end |
EntrezGene: | Tef |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.60e-13 | 95 |
ectoderm | 1.60e-13 | 95 |
presumptive ectoderm | 1.60e-13 | 95 |
central nervous system | 4.17e-13 | 73 |
nervous system | 1.16e-12 | 75 |
regional part of nervous system | 4.79e-11 | 54 |
brain | 4.25e-10 | 47 |
future brain | 4.25e-10 | 47 |
neural tube | 4.34e-10 | 52 |
neural rod | 4.34e-10 | 52 |
future spinal cord | 4.34e-10 | 52 |
neural keel | 4.34e-10 | 52 |
ecto-epithelium | 6.01e-10 | 73 |
regional part of brain | 1.37e-09 | 46 |
neurectoderm | 4.19e-09 | 64 |
neural plate | 4.19e-09 | 64 |
presumptive neural plate | 4.19e-09 | 64 |
anatomical conduit | 1.61e-08 | 122 |
occipital lobe | 6.12e-08 | 10 |
visual cortex | 6.12e-08 | 10 |
neocortex | 6.12e-08 | 10 |
adult organism | 8.79e-08 | 51 |
structure with developmental contribution from neural crest | 1.14e-07 | 92 |
anterior neural tube | 2.35e-07 | 40 |
tube | 6.49e-07 | 114 |
regional part of forebrain | 6.60e-07 | 39 |
forebrain | 6.60e-07 | 39 |
future forebrain | 6.60e-07 | 39 |
regional part of cerebral cortex | 9.21e-07 | 17 |