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FFCP PHASE1:Mm9::chr15:81767276..81767304,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:81767276..81767304,+
|DHSsupport=NA
|short_description=p2@Csdc2
|DPIdataset=NA
|description=CAGE_peak_2_at_Csdc2_5end
|association_with_transcript=87bp_to_ENSMUST00000038757,NM_145473,uc007wxs.2_5end
|EntrezGene=105859
|EntrezGene=105859
|HGNC=
|HGNC=
|MCL_coexpression_id=2158
|TSSclassifier=NA
|UniProt=Q3V1F0,Q91YQ3
|UniProt=Q3V1F0,Q91YQ3
|association_with_transcript=87bp_to_ENSMUST00000038757,NM_145473,uc007wxs.2_5end
|cluster_id=chr15:81767276..81767304,+
|description=CAGE_peak_2_at_Csdc2_5end
|id=chr15:81767276..81767304,+
|ontology_enrichment_celltype=CL:0002319!3.63e-14!43;CL:0000221!4.36e-14!44;CL:0000133!4.36e-14!44;CL:0000117!5.58e-12!23;CL:0000337!5.58e-12!23;CL:0000540!1.53e-10!33;CL:0000047!1.53e-10!33;CL:0000031!1.53e-10!33;CL:0000404!1.53e-10!33;CL:0000055!3.15e-10!50;CL:0000393!1.60e-07!39;CL:0000211!1.60e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-14,23;CL:0000337,1.41e-14,23;CL:0002319,5.58e-14,43;CL:0000221,2.39e-13,44;CL:0000133,2.39e-13,44;CL:0000540,5.63e-10,33;CL:0000047,5.63e-10,33;CL:0000031,5.63e-10,33;CL:0000404,5.63e-10,33;CL:0000393,5.13e-07,39;CL:0000211,5.13e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.30e-30!102;UBERON:0000924!1.30e-30!102;UBERON:0006601!1.30e-30!102;UBERON:0000073!8.89e-28!75;UBERON:0001016!8.89e-28!75;UBERON:0001017!1.11e-27!73;UBERON:0005743!1.11e-27!73;UBERON:0002346!1.35e-25!71;UBERON:0003075!1.35e-25!71;UBERON:0007284!1.35e-25!71;UBERON:0001049!6.26e-23!52;UBERON:0005068!6.26e-23!52;UBERON:0006241!6.26e-23!52;UBERON:0007135!6.26e-23!52;UBERON:0000033!1.67e-21!63;UBERON:0000955!3.71e-20!50;UBERON:0006238!3.71e-20!50;UBERON:0002616!2.11e-19!49;UBERON:0002020!6.54e-18!34;UBERON:0003056!4.53e-17!49;UBERON:0003080!9.31e-15!40;UBERON:0002791!2.78e-14!29;UBERON:0003528!2.78e-14!29;UBERON:0001893!2.78e-14!29;UBERON:0002780!3.61e-14!39;UBERON:0001890!3.61e-14!39;UBERON:0006240!3.61e-14!39;UBERON:0000956!2.72e-10!21;UBERON:0001869!2.72e-10!21;UBERON:0000203!2.72e-10!21;UBERON:0002619!2.21e-09!17;UBERON:0003076!3.13e-09!12;UBERON:0003057!3.13e-09!12;UBERON:0007811!1.13e-08!86;UBERON:0000468!4.57e-08!333;UBERON:0000153!3.02e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.94e-28,95;UBERON:0000924,1.94e-28,95;UBERON:0006601,1.94e-28,95;UBERON:0001017,4.38e-28,73;UBERON:0001016,7.13e-28,75;UBERON:0002346,9.77e-26,64;UBERON:0003075,9.77e-26,64;UBERON:0007284,9.77e-26,64;UBERON:0000073,1.00e-25,54;UBERON:0001049,1.96e-25,52;UBERON:0005068,1.96e-25,52;UBERON:0006241,1.96e-25,52;UBERON:0007135,1.96e-25,52;UBERON:0010371,4.05e-24,73;UBERON:0002020,5.38e-22,34;UBERON:0000955,5.05e-21,47;UBERON:0006238,5.05e-21,47;UBERON:0002616,4.05e-20,46;UBERON:0010314,4.57e-18,92;UBERON:0003528,1.86e-17,29;UBERON:0002791,1.86e-17,29;UBERON:0001893,1.86e-17,29;UBERON:0003056,2.90e-17,49;UBERON:0003080,1.42e-15,40;UBERON:0002780,7.18e-15,39;UBERON:0001890,7.18e-15,39;UBERON:0006240,7.18e-15,39;UBERON:0000956,1.81e-12,21;UBERON:0001869,1.81e-12,21;UBERON:0000203,1.81e-12,21;UBERON:0002619,2.47e-11,17;UBERON:0003076,3.82e-11,12;UBERON:0003057,3.82e-11,12;UBERON:0002021,1.20e-07,10;UBERON:0000411,1.20e-07,10;UBERON:0001950,1.20e-07,10
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,11.7358701652206,5.45062890951116,4.39372365468944,5.8328969722285,1.81982348112971,5.75010257459886,0,0,0,0,0.573066879877513,0,13.7575193384526,16.9277113367051,15.2119536841483,1.69422266034566,0,0,0.988866362566974,0.7104801149461,3.29560121570245,7.30014780110954,1.24427534770173,3.51015439662396,2.73422449756797,21.9951257990929,17.0068776532742,4.04219637409348,3.64212789869298,3.67687514644008,1.10115880999389,3.44755812830007,5.06901559745603,12.924856197559,11.7104183811084,8.33461392890816,6.42120897703176,1.12552522006336,6.26472815884921,24.1595440088408,19.362548588678,12.1159639786445,0.37863096666592,3.32514864469856,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0,0,1.03909497345377,1.38788261412909,2.13125834818499,1.38369298353635,0.904335843315735,2.3517741427141,0.753999547978053,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,13.1751358655196,10.8912287542997,0,0,0,0,7.48953197024113,4.57500602818627,8.16753288733619,3.82413504423008,4.34716277461562,6.02585329222724,6.00292673350703,2.95334155165917,0.497627882440372,0,0.841767423545896,0.780722657776222,1.60931473103431,2.52086981727489,3.16480117455002,5.23881043465224,3.58718416797579,4.02917415606834,5.69147415625834,0,0.756424320671277,0.527853372491847,0,0,1.0447564995665,0.823128545631774,1.99034266818493,0,0,0,1.24275463521301,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.656669856316381,2.51313309592153,5.26319954731196,0.878200461164203,6.30770168173747,4.83666881697493,7.20332286654991,0,0,0.639864751605702,1.39342003116263,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,0,0,0.795825888164603,0.38992817423824,0,0,0,0.948339504765408,0.799739588268102,0,0.610953983535943,0.581857461502877,0.98190147846446,0.442655759869801,0.147610147979602,0.156998727841375,0.370191491765402,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0.814824882210129,0.848725428875941,0.704070744865506,0.335012514883631,0.238043640886014,0.390267295715598,0.630540576424764,1.10732344824387,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,9.63303539926752,7.501547941901,0,0,0.94652465824877,0.390438744296638,1.50796378412959,0.716906393857656,1.33679204449436,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,45.6276269318966,0.99358059645788,2.67098405500883,3.09485222771795,0.824850614862677,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,1.53717573971964,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.643011105094777,1.41872186913819,0.713475270408282,1.81003922662333,1.8267896946876,0.23467170806371,0.21183207086382,0,2.63818004706368,0.322928853391811,1.14594557363496,5.61050016814741,9.02774948597837,0,8.90041449650446,0,2.06386867963222,0.740778109478847,0.188368457004691,0,0,0,0,0,0,1.10717597753397,1.21991680276109,1.08005340821801,0.627264888043406,0.436725127492355,0.944050424693745,0.661227645802687,0.26175594198403,0.129614973291793,0,0.56369293868419,2.69129782879162,2.15096037594227,3.69457257853691,2.84151611651008,1.18269287843545,5.04636126176742,3.25510962109875,2.41176492179135,1.20792060413003,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,1.13365191807606,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,0.643105137237198,0,6.21227026878773,5.9842280745933,12.0308057822273,6.53042092906013,8.22099023724771,6.7985450765073,2.70009000092722,4.95353323546643,7.25027854374727,4.65984280576638,0.415149390336707,1.99512436700516,2.04880326904961,1.21553358534147,4.40187641518763,2.75765262675021,4.00044110042907,3.09052585858341,4.49286893428541,2.77966932940177,5.57654459758527,2.82939512079114,2.43467919421694,3.3293079250532,3.56099907524802,1.42888107384922,2.89710814862139,3.27945674788299,0.824171801606613,2.20798380201596,2.40008476669791,1.24233064311536,3.81497903915713,1.74415699958794,1.59985946706062,2.36920902096694,1.82927972872773,2.89376682581627,2.58027816307137,1.68342681497322,3.08451047122853,1.57607171800902,2.04615521584845,1.70430525304563,2.12197272079256,8.74337022782811,2.8071793013449,1.93383948643468,4.20834330551455,2.20591419119516,1.39120701372253
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,11.7358701652206,5.45062890951116,4.39372365468944,5.8328969722285,1.81982348112971,5.75010257459886,0,0,0,0,0.573066879877513,0,13.7575193384526,16.9277113367051,15.2119536841483,1.69422266034566,0,0,0.988866362566974,0.7104801149461,3.29560121570245,7.30014780110954,1.24427534770173,3.51015439662396,2.73422449756797,21.9951257990929,17.0068776532742,4.04219637409348,3.64212789869298,3.67687514644008,1.10115880999389,3.44755812830007,5.06901559745603,12.924856197559,11.7104183811084,8.33461392890816,6.42120897703176,1.12552522006336,6.26472815884921,24.1595440088408,19.362548588678,12.1159639786445,0.37863096666592,3.32514864469856,0,0,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,0.216491041011214,0,0,0,0,1.03909497345377,1.38788261412909,2.13125834818499,1.38369298353635,0.904335843315735,2.3517741427141,0.753999547978053,0.247194967734374,0.289198713839823,0,0.485300549842228,0.220841518460394,0,0,13.1751358655196,10.8912287542997,0,0,0,0,7.48953197024113,4.57500602818627,8.16753288733619,3.82413504423008,4.34716277461562,6.02585329222724,6.00292673350703,2.95334155165917,0.497627882440372,0,0.841767423545896,0.780722657776222,1.60931473103431,2.52086981727489,3.16480117455002,5.23881043465224,3.58718416797579,4.02917415606834,5.69147415625834,0,0.756424320671277,0.527853372491847,0,0,1.0447564995665,0.823128545631774,1.99034266818493,0,0,0,1.24275463521301,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.656669856316381,2.51313309592153,5.26319954731196,0.878200461164203,6.30770168173747,4.83666881697493,7.20332286654991,0,0,0.639864751605702,1.39342003116263,1.41754207454303,0.80673409849337,0.22237804384487,0.380451252225118,0,0,0,0.795825888164603,0.38992817423824,0,0,0,0.948339504765408,0.799739588268102,0,0.610953983535943,0.581857461502877,0.98190147846446,0.442655759869801,0.147610147979602,0.156998727841375,0.370191491765402,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0.757965647081939,0.814824882210129,0.848725428875941,0.704070744865506,0.335012514883631,0.238043640886014,0.390267295715598,0.630540576424764,1.10732344824387,0.318909537314974,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,9.63303539926752,7.501547941901,0,0,0.94652465824877,0.390438744296638,1.50796378412959,0.716906393857656,1.33679204449436,0.566153061577665,0.404810701674894,1.16902343164525,1.18586333383957,45.6276269318966,0.99358059645788,2.67098405500883,3.09485222771795,0.824850614862677,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,1.53717573971964,1.03371317267288,0,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.643011105094777,1.41872186913819,0.713475270408282,1.81003922662333,1.8267896946876,0.23467170806371,0.21183207086382,0,2.63818004706368,0.322928853391811,1.14594557363496,5.61050016814741,9.02774948597837,0,8.90041449650446,0,2.06386867963222,0.740778109478847,0.188368457004691,0,0,0,0,0,0,1.10717597753397,1.21991680276109,1.08005340821801,0.627264888043406,0.436725127492355,0.944050424693745,0.661227645802687,0.26175594198403,0.129614973291793,0,0.56369293868419,2.69129782879162,2.15096037594227,3.69457257853691,2.84151611651008,1.18269287843545,5.04636126176742,3.25510962109875,2.41176492179135,1.20792060413003,0.288030006257865,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,1.13365191807606,0,0,0,0.965947970160952,0.375364950902364,0.36630324853453,0.643105137237198,0,6.21227026878773,5.9842280745933,12.0308057822273,6.53042092906013,8.22099023724771,6.7985450765073,2.70009000092722,4.95353323546643,7.25027854374727,4.65984280576638,0.415149390336707,1.99512436700516,2.04880326904961,1.21553358534147,4.40187641518763,2.75765262675021,4.00044110042907,3.09052585858341,4.49286893428541,2.77966932940177,5.57654459758527,2.82939512079114,2.43467919421694,3.3293079250532,3.56099907524802,1.42888107384922,2.89710814862139,3.27945674788299,0.824171801606613,2.20798380201596,2.40008476669791,1.24233064311536,3.81497903915713,1.74415699958794,1.59985946706062,2.36920902096694,1.82927972872773,2.89376682581627,2.58027816307137,1.68342681497322,3.08451047122853,1.57607171800902,2.04615521584845,1.70430525304563,2.12197272079256,8.74337022782811,2.8071793013449,1.93383948643468,4.20834330551455,2.20591419119516,1.39120701372253
|short_description=p2@Csdc2
}}
}}

Latest revision as of 04:29, 27 September 2015

Short description:p2@Csdc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Csdc2_5end
Coexpression cluster:MCL_coexpression_mm9:2158
Association with transcript: 87bp_to_ENSMUST00000038757, NM_145473, uc007wxs.2_5end
EntrezGene:Csdc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Csdc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.45
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.39
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.04
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.71
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.16
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F619.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I210.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F18.17
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B26.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C65.24
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A25.69
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I65.26
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G17.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A37.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I945.63
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.64
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I55.61
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.41e-1423
neuroblast (sensu Vertebrata)1.41e-1423
neural cell5.58e-1443
ectodermal cell2.39e-1344
neurectodermal cell2.39e-1344
neuron5.63e-1033
neuronal stem cell5.63e-1033
neuroblast5.63e-1033
electrically signaling cell5.63e-1033
electrically responsive cell5.13e-0739
electrically active cell5.13e-0739

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.94e-2895
ectoderm1.94e-2895
presumptive ectoderm1.94e-2895
central nervous system4.38e-2873
nervous system7.13e-2875
neurectoderm9.77e-2664
neural plate9.77e-2664
presumptive neural plate9.77e-2664
regional part of nervous system1.00e-2554
neural tube1.96e-2552
neural rod1.96e-2552
future spinal cord1.96e-2552
neural keel1.96e-2552
ecto-epithelium4.05e-2473
gray matter5.38e-2234
brain5.05e-2147
future brain5.05e-2147
regional part of brain4.05e-2046
structure with developmental contribution from neural crest4.57e-1892
brain grey matter1.86e-1729
regional part of telencephalon1.86e-1729
telencephalon1.86e-1729
pre-chordal neural plate2.90e-1749
anterior neural tube1.42e-1540
regional part of forebrain7.18e-1539
forebrain7.18e-1539
future forebrain7.18e-1539
cerebral cortex1.81e-1221
cerebral hemisphere1.81e-1221
pallium1.81e-1221
regional part of cerebral cortex2.47e-1117
posterior neural tube3.82e-1112
chordal neural plate3.82e-1112
occipital lobe1.20e-0710
visual cortex1.20e-0710
neocortex1.20e-0710
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