Personal tools

FFCP PHASE1:Mm9::chr15:99288173..99288184,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr15:99288173..99288184,- |short_description=p3@Nckap5l |description=CAGE_peak_3_at_Nckap5l_5end |association_with_transcript=0bp_to_ENSMUST00000023747,NM_0010...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr15:99288173..99288184,-
|DHSsupport=NA
|short_description=p3@Nckap5l
|DPIdataset=NA
|description=CAGE_peak_3_at_Nckap5l_5end
|association_with_transcript=0bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end
|EntrezGene=380969
|EntrezGene=380969
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6GQX2
|UniProt=Q6GQX2
|association_with_transcript=0bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end
|cluster_id=chr15:99288173..99288184,-
|description=CAGE_peak_3_at_Nckap5l_5end
|id=chr15:99288173..99288184,-
|ontology_enrichment_celltype=CL:0000117!1.61e-07!23;CL:0000337!1.61e-07!23;CL:0000540!4.65e-07!33;CL:0000047!4.65e-07!33;CL:0000031!4.65e-07!33;CL:0000404!4.65e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.95e-09,23;CL:0000337,2.95e-09,23;CL:0000540,5.10e-07,33;CL:0000047,5.10e-07,33;CL:0000031,5.10e-07,33;CL:0000404,5.10e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.67e-15!71;UBERON:0003075!5.67e-15!71;UBERON:0007284!5.67e-15!71;UBERON:0001017!1.00e-14!73;UBERON:0005743!1.00e-14!73;UBERON:0000073!1.75e-14!75;UBERON:0001016!1.75e-14!75;UBERON:0001049!2.18e-14!52;UBERON:0005068!2.18e-14!52;UBERON:0006241!2.18e-14!52;UBERON:0007135!2.18e-14!52;UBERON:0004121!8.15e-14!102;UBERON:0000924!8.15e-14!102;UBERON:0006601!8.15e-14!102;UBERON:0003080!3.92e-11!40;UBERON:0000955!4.21e-11!50;UBERON:0006238!4.21e-11!50;UBERON:0003056!4.33e-11!49;UBERON:0002616!4.37e-11!49;UBERON:0002780!1.30e-10!39;UBERON:0001890!1.30e-10!39;UBERON:0006240!1.30e-10!39;UBERON:0002020!3.17e-10!34;UBERON:0000033!3.89e-10!63;UBERON:0007811!1.68e-08!86;UBERON:0002791!2.56e-08!29;UBERON:0003528!2.56e-08!29;UBERON:0001893!2.56e-08!29;UBERON:0000153!2.91e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.00e-16,52;UBERON:0005068,1.00e-16,52;UBERON:0006241,1.00e-16,52;UBERON:0007135,1.00e-16,52;UBERON:0002346,1.78e-16,64;UBERON:0003075,1.78e-16,64;UBERON:0007284,1.78e-16,64;UBERON:0001017,1.65e-15,73;UBERON:0010371,4.80e-15,73;UBERON:0001016,8.84e-15,75;UBERON:0000073,1.70e-14,54;UBERON:0004121,8.20e-14,95;UBERON:0000924,8.20e-14,95;UBERON:0006601,8.20e-14,95;UBERON:0010314,4.53e-13,92;UBERON:0002616,5.25e-13,46;UBERON:0002020,1.21e-12,34;UBERON:0000955,1.49e-12,47;UBERON:0006238,1.49e-12,47;UBERON:0003056,5.62e-12,49;UBERON:0003080,6.18e-12,40;UBERON:0002780,4.11e-11,39;UBERON:0001890,4.11e-11,39;UBERON:0006240,4.11e-11,39;UBERON:0003528,8.97e-10,29;UBERON:0002791,8.97e-10,29;UBERON:0001893,8.97e-10,29;UBERON:0000025,5.58e-08,114;UBERON:0004111,2.86e-07,122;UBERON:0000369,4.07e-07,5;UBERON:0002435,4.07e-07,5;UBERON:0000204,4.07e-07,5;UBERON:0010082,4.07e-07,5
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0.468129052643987,0.68487187290202,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.255129870453209,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,0,0.65407546914134,0,0,0.279972843250725,0,0,0,1.68046899571232,1.02903774414379,0.573066879877513,0.515672092277442,1.82084814773638,2.11596391708813,2.53532561402472,0.677689064138264,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,2.30530983192933,1.24427534770173,1.21505344498522,0.630974884054146,0.571301968807607,1.54607978666129,0.857435594504678,1.34183659425531,1.83843757322004,0,0.383062014255563,0.921639199537461,1.31886287730194,1.64677758484337,1.56274011167028,0.837548997004143,1.12552522006336,0.45839474333043,1.47314292736834,1.70846016958924,1.3047961207771,0.37863096666592,0.604572480854284,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,1.05829836422134,0.376999773989026,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0.484875253135222,1.86391761218122,1.17112318804619,2.09446706813455,0,0,0,0.127070227073065,1.49790639404823,2.28750301409313,2.26177833803156,0.869121600961382,2.55715457330331,0.83115217823824,2.43361894601636,0.611036183101898,0.373220911830279,0.252722758433675,0,1.04096354370163,0.229902104433473,0.720248519221397,1.05493372485001,1.29269348387523,0.512454881139399,0.562210347358373,1.03481348295606,0.862271971731369,1.13463648100692,0.879755620819744,0.219195732427575,1.39023624612799,0,0.205782136407943,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0.540186184383045,0.946978942340841,0.787056926989615,0.154267112887378,0.465067889500816,1.07309360559848,1.05088808130453,0.493679549740441,0,0.0810688095458557,0.146199987425332,1.09775057645525,1.07365135008297,1.26173969138476,2.16099685996497,0.330418782983798,0,1.49301775374664,1.39342003116263,0.515469845288373,0.403367049246685,0,0.570676878337677,0,0,0.502670417600539,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0.569003702859245,0.685491075658373,1.1270773567308,0.610953983535943,0.775809948670503,0.420814919341911,0.822074982615345,0,0,0.370191491765402,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.568474235311454,1.30371981153621,0.678980343100753,0,1.17254380209271,1.19021820443007,0.780534591431195,0.630540576424764,0.8858587585951,1.11618338060241,0.655453258862952,1.20879487306127,1.15719246865209,0,0,0,0,0.642202359951168,1.87538698547525,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,0.668396022247182,1.98153571552183,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.567760340833074,0.712262414669021,0.977321756121456,0.989820737835213,0,0.485561272309963,0.906970670894253,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,1.29358683782755,0.643011105094777,1.06404140185364,0.713475270408282,0.822745103010605,1.2178597964584,0.469343416127421,0,0,0.16488625294148,1.29171541356724,0.844380948994182,0.596861720015682,0.984845398470368,0.582961673259701,1.29797711407357,0.512612642393558,0.619160603889667,0.185194527369712,0,0.27338845544205,0.228778173206523,0.339956859987711,0,0.138199973804424,0.954670618015114,0.949007980743406,1.01659733563424,0.108005340821801,0,0,0,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.747582730219894,0.66183396182839,0.583353565032143,0.774958940866387,1.520605129417,0.938857909166032,0.911430693907651,1.25831213310853,0.241584120826006,0.576060012515731,0.632022241256357,0,0.410843828659309,0.909445760844565,0.537080087002444,0.79472541912506,0.721172697119813,0.886137163047463,0.706765149637033,0.609654453239999,0.604957110821043,1.16949456887703,0.865906574762965,0.935015217452552,0,0,0.62799699626633,0.335769232728157,0.772758376128762,0.563047426353546,1.09890974560359,0.214368379079066,0.501572104035363,1.12950368523413,3.22227665555024,2.29158205375759,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0.93408612825759,1.99512436700516,0.512200817262403,0.729320151204882,0.209613162627982,1.2869045591501,0.222246727801615,0.618105171716683,0,0.758091635291392,0.50695859978048,0.565879024158229,0.842773567228942,0.640251524048693,0.861532034334199,0.476293691283074,0.695305955669133,1.92909220463705,1.23625770240992,1.03039244094078,0.685738504770831,1.06485483695602,0.953744759789284,1.0174249164263,1.03520318456864,0.761531471025089,1.09756783723664,0.263069711437843,1.08643291076689,0.561142271657738,1.06771516311757,0.394017929502254,0,0.309873682371932,0.385813221962283,0.749431733813838,0.935726433781634,0.214871054048298,1.3390183244819,0.220591419119515,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0.468129052643987,0.68487187290202,0.159544317990673,0.342401459862411,0.262261207256992,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0.255129870453209,0.595745707205312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,0,0.65407546914134,0,0,0.279972843250725,0,0,0,1.68046899571232,1.02903774414379,0.573066879877513,0.515672092277442,1.82084814773638,2.11596391708813,2.53532561402472,0.677689064138264,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,2.30530983192933,1.24427534770173,1.21505344498522,0.630974884054146,0.571301968807607,1.54607978666129,0.857435594504678,1.34183659425531,1.83843757322004,0,0.383062014255563,0.921639199537461,1.31886287730194,1.64677758484337,1.56274011167028,0.837548997004143,1.12552522006336,0.45839474333043,1.47314292736834,1.70846016958924,1.3047961207771,0.37863096666592,0.604572480854284,0.289864488701678,0,0,0,0,0,0.140444420131752,0.511290967734173,0,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,0.60289056221049,1.05829836422134,0.376999773989026,0.247194967734374,0.289198713839823,0,0.485300549842228,0,0.484875253135222,1.86391761218122,1.17112318804619,2.09446706813455,0,0,0,0.127070227073065,1.49790639404823,2.28750301409313,2.26177833803156,0.869121600961382,2.55715457330331,0.83115217823824,2.43361894601636,0.611036183101898,0.373220911830279,0.252722758433675,0,1.04096354370163,0.229902104433473,0.720248519221397,1.05493372485001,1.29269348387523,0.512454881139399,0.562210347358373,1.03481348295606,0.862271971731369,1.13463648100692,0.879755620819744,0.219195732427575,1.39023624612799,0,0.205782136407943,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,0.540186184383045,0.946978942340841,0.787056926989615,0.154267112887378,0.465067889500816,1.07309360559848,1.05088808130453,0.493679549740441,0,0.0810688095458557,0.146199987425332,1.09775057645525,1.07365135008297,1.26173969138476,2.16099685996497,0.330418782983798,0,1.49301775374664,1.39342003116263,0.515469845288373,0.403367049246685,0,0.570676878337677,0,0,0.502670417600539,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0.569003702859245,0.685491075658373,1.1270773567308,0.610953983535943,0.775809948670503,0.420814919341911,0.822074982615345,0,0,0.370191491765402,0,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.369506380333209,0.568474235311454,1.30371981153621,0.678980343100753,0,1.17254380209271,1.19021820443007,0.780534591431195,0.630540576424764,0.8858587585951,1.11618338060241,0.655453258862952,1.20879487306127,1.15719246865209,0,0,0,0,0.642202359951168,1.87538698547525,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,0.668396022247182,1.98153571552183,0.404810701674894,0.876767573733936,0.395287777946524,0.642642632843614,0.567760340833074,0.712262414669021,0.977321756121456,0.989820737835213,0,0.485561272309963,0.906970670894253,0.188605079755898,0,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,1.29358683782755,0.643011105094777,1.06404140185364,0.713475270408282,0.822745103010605,1.2178597964584,0.469343416127421,0,0,0.16488625294148,1.29171541356724,0.844380948994182,0.596861720015682,0.984845398470368,0.582961673259701,1.29797711407357,0.512612642393558,0.619160603889667,0.185194527369712,0,0.27338845544205,0.228778173206523,0.339956859987711,0,0.138199973804424,0.954670618015114,0.949007980743406,1.01659733563424,0.108005340821801,0,0,0,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0.747582730219894,0.66183396182839,0.583353565032143,0.774958940866387,1.520605129417,0.938857909166032,0.911430693907651,1.25831213310853,0.241584120826006,0.576060012515731,0.632022241256357,0,0.410843828659309,0.909445760844565,0.537080087002444,0.79472541912506,0.721172697119813,0.886137163047463,0.706765149637033,0.609654453239999,0.604957110821043,1.16949456887703,0.865906574762965,0.935015217452552,0,0,0.62799699626633,0.335769232728157,0.772758376128762,0.563047426353546,1.09890974560359,0.214368379079066,0.501572104035363,1.12950368523413,3.22227665555024,2.29158205375759,0.859265911718438,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,1.03552062350364,0.93408612825759,1.99512436700516,0.512200817262403,0.729320151204882,0.209613162627982,1.2869045591501,0.222246727801615,0.618105171716683,0,0.758091635291392,0.50695859978048,0.565879024158229,0.842773567228942,0.640251524048693,0.861532034334199,0.476293691283074,0.695305955669133,1.92909220463705,1.23625770240992,1.03039244094078,0.685738504770831,1.06485483695602,0.953744759789284,1.0174249164263,1.03520318456864,0.761531471025089,1.09756783723664,0.263069711437843,1.08643291076689,0.561142271657738,1.06771516311757,0.394017929502254,0,0.309873682371932,0.385813221962283,0.749431733813838,0.935726433781634,0.214871054048298,1.3390183244819,0.220591419119515,0.231867835620421
|short_description=p3@Nckap5l
}}
}}

Latest revision as of 13:55, 1 October 2015

Short description:p3@Nckap5l
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nckap5l_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000023747, NM_001001884, uc007xpn.1_5end
EntrezGene:Nckap5l
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nckap5l

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.95e-0923
neuroblast (sensu Vertebrata)2.95e-0923
neuron5.10e-0733
neuronal stem cell5.10e-0733
neuroblast5.10e-0733
electrically signaling cell5.10e-0733

Uber anatomy
Ontology termp-valuen
neural tube1.00e-1652
neural rod1.00e-1652
future spinal cord1.00e-1652
neural keel1.00e-1652
neurectoderm1.78e-1664
neural plate1.78e-1664
presumptive neural plate1.78e-1664
central nervous system1.65e-1573
ecto-epithelium4.80e-1573
nervous system8.84e-1575
regional part of nervous system1.70e-1454
ectoderm-derived structure8.20e-1495
ectoderm8.20e-1495
presumptive ectoderm8.20e-1495
structure with developmental contribution from neural crest4.53e-1392
regional part of brain5.25e-1346
gray matter1.21e-1234
brain1.49e-1247
future brain1.49e-1247
pre-chordal neural plate5.62e-1249
anterior neural tube6.18e-1240
regional part of forebrain4.11e-1139
forebrain4.11e-1139
future forebrain4.11e-1139
brain grey matter8.97e-1029
regional part of telencephalon8.97e-1029
telencephalon8.97e-1029
tube5.58e-08114
anatomical conduit2.86e-07122
corpus striatum4.07e-075
striatum4.07e-075
ventral part of telencephalon4.07e-075
future corpus striatum4.07e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:99288173..99288184,-&oldid=4306092"