FFCP PHASE1:Mm9::chr18:35862724..35862735,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:35862724..35862735,-
|short_description=p3@Dnajc18
|description=CAGE_peak_3_at_Dnajc18_5end
|association_with_transcript=62bp_to_ENSMUST00000025208,NM_029...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76594 | |EntrezGene=76594 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=361 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CZJ9 | |UniProt=Q9CZJ9 | ||
|association_with_transcript=62bp_to_ENSMUST00000025208,NM_029669,uc008emq.2_5end | |||
|cluster_id=chr18:35862724..35862735,- | |||
|description=CAGE_peak_3_at_Dnajc18_5end | |||
|id=chr18:35862724..35862735,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.87e-21!71;UBERON:0003075!1.87e-21!71;UBERON:0007284!1.87e-21!71;UBERON:0000033!3.25e-21!63;UBERON:0001017!3.59e-20!73;UBERON:0005743!3.59e-20!73;UBERON:0001049!1.25e-19!52;UBERON:0005068!1.25e-19!52;UBERON:0006241!1.25e-19!52;UBERON:0007135!1.25e-19!52;UBERON:0000073!1.80e-19!75;UBERON:0001016!1.80e-19!75;UBERON:0004121!5.17e-19!102;UBERON:0000924!5.17e-19!102;UBERON:0006601!5.17e-19!102;UBERON:0002616!1.93e-18!49;UBERON:0000955!2.28e-18!50;UBERON:0006238!2.28e-18!50;UBERON:0003056!1.07e-17!49;UBERON:0003080!3.29e-15!40;UBERON:0002780!1.28e-14!39;UBERON:0001890!1.28e-14!39;UBERON:0006240!1.28e-14!39;UBERON:0000153!3.96e-12!94;UBERON:0007811!7.32e-12!86;UBERON:0002020!1.21e-11!34;UBERON:0000025!1.72e-11!114;UBERON:0004111!7.51e-11!122;UBERON:0002791!7.81e-10!29;UBERON:0003528!7.81e-10!29;UBERON:0001893!7.81e-10!29;UBERON:0002021!7.52e-08!10;UBERON:0000411!7.52e-08!10;UBERON:0001950!7.52e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.52e-27,92;UBERON:0002346,2.14e-22,64;UBERON:0003075,2.14e-22,64;UBERON:0007284,2.14e-22,64;UBERON:0000073,5.25e-21,54;UBERON:0001049,4.00e-20,52;UBERON:0005068,4.00e-20,52;UBERON:0006241,4.00e-20,52;UBERON:0007135,4.00e-20,52;UBERON:0001017,4.41e-20,73;UBERON:0010371,2.75e-19,73;UBERON:0001016,4.47e-19,75;UBERON:0004121,3.01e-18,95;UBERON:0000924,3.01e-18,95;UBERON:0006601,3.01e-18,95;UBERON:0003056,4.08e-18,49;UBERON:0002616,1.97e-17,46;UBERON:0000955,2.34e-17,47;UBERON:0006238,2.34e-17,47;UBERON:0003080,1.62e-15,40;UBERON:0002780,6.63e-15,39;UBERON:0001890,6.63e-15,39;UBERON:0006240,6.63e-15,39;UBERON:0000025,2.28e-12,114;UBERON:0002020,8.16e-12,34;UBERON:0004111,2.26e-11,122;UBERON:0003528,6.20e-10,29;UBERON:0002791,6.20e-10,29;UBERON:0001893,6.20e-10,29;UBERON:0002021,3.97e-08,10;UBERON:0000411,3.97e-08,10;UBERON:0001950,3.97e-08,10 | |||
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| ||
|short_description=p3@Dnajc18 | |||
}} | }} |
Latest revision as of 04:55, 27 September 2015
Short description: | p3@Dnajc18 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dnajc18_5end |
Coexpression cluster: | MCL_coexpression_mm9:361 |
Association with transcript: | 62bp_to_ENSMUST00000025208, NM_029669, uc008emq.2_5end |
EntrezGene: | Dnajc18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.52e-27 | 92 |
neurectoderm | 2.14e-22 | 64 |
neural plate | 2.14e-22 | 64 |
presumptive neural plate | 2.14e-22 | 64 |
regional part of nervous system | 5.25e-21 | 54 |
neural tube | 4.00e-20 | 52 |
neural rod | 4.00e-20 | 52 |
future spinal cord | 4.00e-20 | 52 |
neural keel | 4.00e-20 | 52 |
central nervous system | 4.41e-20 | 73 |
ecto-epithelium | 2.75e-19 | 73 |
nervous system | 4.47e-19 | 75 |
ectoderm-derived structure | 3.01e-18 | 95 |
ectoderm | 3.01e-18 | 95 |
presumptive ectoderm | 3.01e-18 | 95 |
pre-chordal neural plate | 4.08e-18 | 49 |
regional part of brain | 1.97e-17 | 46 |
brain | 2.34e-17 | 47 |
future brain | 2.34e-17 | 47 |
anterior neural tube | 1.62e-15 | 40 |
regional part of forebrain | 6.63e-15 | 39 |
forebrain | 6.63e-15 | 39 |
future forebrain | 6.63e-15 | 39 |
tube | 2.28e-12 | 114 |
gray matter | 8.16e-12 | 34 |
anatomical conduit | 2.26e-11 | 122 |
brain grey matter | 6.20e-10 | 29 |
regional part of telencephalon | 6.20e-10 | 29 |
telencephalon | 6.20e-10 | 29 |
occipital lobe | 3.97e-08 | 10 |
visual cortex | 3.97e-08 | 10 |
neocortex | 3.97e-08 | 10 |