FFCP PHASE1:Mm9::chr2:112411598..112411619,+: Difference between revisions
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|id=chr2:112411598..112411619,+
|short_description=p@chr2:112411598..112411619,+
|description=CAGE_peak_at_chr2:112411598..112411619,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=218 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:112411598..112411619,+ | |||
|description=CAGE_peak_at_chr2:112411598..112411619,+ | |||
|id=chr2:112411598..112411619,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.54e-18!50;UBERON:0006238!1.54e-18!50;UBERON:0000033!3.70e-18!63;UBERON:0002616!1.83e-16!49;UBERON:0001017!1.87e-15!73;UBERON:0005743!1.87e-15!73;UBERON:0001049!1.87e-15!52;UBERON:0005068!1.87e-15!52;UBERON:0006241!1.87e-15!52;UBERON:0007135!1.87e-15!52;UBERON:0000073!5.84e-15!75;UBERON:0001016!5.84e-15!75;UBERON:0007811!1.75e-12!86;UBERON:0002346!3.51e-12!71;UBERON:0003075!3.51e-12!71;UBERON:0007284!3.51e-12!71;UBERON:0004733!1.30e-11!6;UBERON:0004732!1.30e-11!6;UBERON:0002028!1.30e-11!6;UBERON:0007277!1.30e-11!6;UBERON:0004121!1.60e-11!102;UBERON:0000924!1.60e-11!102;UBERON:0006601!1.60e-11!102;UBERON:0000153!3.72e-11!94;UBERON:0001896!6.98e-10!2;UBERON:0005290!6.98e-10!2;UBERON:0010096!6.98e-10!2;UBERON:0007023!7.59e-10!51;UBERON:0003076!7.66e-09!12;UBERON:0003057!7.66e-09!12;UBERON:0003080!1.15e-08!40;UBERON:0003056!3.22e-08!49;UBERON:0002780!3.81e-07!39;UBERON:0001890!3.81e-07!39;UBERON:0006240!3.81e-07!39;UBERON:0002298!4.08e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.66e-19,2;UBERON:0002298,4.66e-19,2;UBERON:0005290,4.66e-19,2;UBERON:0010096,4.66e-19,2;UBERON:0004733,4.51e-14,6;UBERON:0004732,4.51e-14,6;UBERON:0002028,4.51e-14,6;UBERON:0007277,4.51e-14,6;UBERON:0003076,2.25e-12,12;UBERON:0003057,2.25e-12,12;UBERON:0000955,1.38e-11,47;UBERON:0006238,1.38e-11,47;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0007023,1.13e-10,51;UBERON:0001049,1.58e-10,52;UBERON:0005068,1.58e-10,52;UBERON:0006241,1.58e-10,52;UBERON:0007135,1.58e-10,52;UBERON:0000073,5.11e-10,54;UBERON:0002259,5.62e-10,1;UBERON:0002314,5.62e-10,1;UBERON:0004061,5.62e-10,1;UBERON:0006777,5.62e-10,1;UBERON:0005882,5.62e-10,1;UBERON:0002616,3.99e-09,46;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002346,1.81e-08,64;UBERON:0003075,1.81e-08,64;UBERON:0007284,1.81e-08,64;UBERON:0010371,2.32e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,0.209446706813455,0,0,0,0,1.9472783122627,3.20250421973039,0,0.173824320192276,0,3.32460871295296,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,15.7611506708933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,0.209446706813455,0,0,0,0,1.9472783122627,3.20250421973039,0,0.173824320192276,0,3.32460871295296,0.486723789203273,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9174401191699,3.7507739709505,0,0,0,0,0,0,0,0,0,0,0,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,15.7611506708933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:112411598..112411619,+ | |||
}} | }} |
Latest revision as of 09:12, 6 August 2015
Short description: | p@chr2:112411598..112411619, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:112411598..112411619, + |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.66e-19 | 2 |
brainstem | 4.66e-19 | 2 |
myelencephalon | 4.66e-19 | 2 |
future myelencephalon | 4.66e-19 | 2 |
segmental subdivision of hindbrain | 4.51e-14 | 6 |
segmental subdivision of nervous system | 4.51e-14 | 6 |
hindbrain | 4.51e-14 | 6 |
presumptive hindbrain | 4.51e-14 | 6 |
posterior neural tube | 2.25e-12 | 12 |
chordal neural plate | 2.25e-12 | 12 |
brain | 1.38e-11 | 47 |
future brain | 1.38e-11 | 47 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
adult organism | 1.13e-10 | 51 |
neural tube | 1.58e-10 | 52 |
neural rod | 1.58e-10 | 52 |
future spinal cord | 1.58e-10 | 52 |
neural keel | 1.58e-10 | 52 |
regional part of nervous system | 5.11e-10 | 54 |
corpora quadrigemina | 5.62e-10 | 1 |
midbrain tectum | 5.62e-10 | 1 |
neural tube mantle layer | 5.62e-10 | 1 |
tectal plate | 5.62e-10 | 1 |
neural tube alar plate | 5.62e-10 | 1 |
regional part of brain | 3.99e-09 | 46 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
neurectoderm | 1.81e-08 | 64 |
neural plate | 1.81e-08 | 64 |
presumptive neural plate | 1.81e-08 | 64 |
ecto-epithelium | 2.32e-07 | 73 |