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FFCP PHASE1:Mm9::chr3:156225059..156225097,+: Difference between revisions

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(Created page with "{{FFCP |id=chr3:156225059..156225097,+ |short_description=p4@Negr1 |description=CAGE_peak_4_at_Negr1_5end |association_with_transcript=126bp_to_ENSMUST00000106065_5end |E...")
 
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{{FFCP
{{FFCP
|id=chr3:156225059..156225097,+
|DHSsupport=NA
|short_description=p4@Negr1
|DPIdataset=NA
|description=CAGE_peak_4_at_Negr1_5end
|association_with_transcript=126bp_to_ENSMUST00000106065_5end
|EntrezGene=320840
|EntrezGene=320840
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=D3Z4T6
|UniProt=D3Z4T6
|association_with_transcript=126bp_to_ENSMUST00000106065_5end
|cluster_id=chr3:156225059..156225097,+
|description=CAGE_peak_4_at_Negr1_5end
|id=chr3:156225059..156225097,+
|ontology_enrichment_celltype=CL:0000117!1.34e-13!23;CL:0000337!1.34e-13!23;CL:0000540!3.28e-08!33;CL:0000047!3.28e-08!33;CL:0000031!3.28e-08!33;CL:0000404!3.28e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.18e-18,23;CL:0000337,2.18e-18,23;CL:0000540,2.86e-10,33;CL:0000047,2.86e-10,33;CL:0000031,2.86e-10,33;CL:0000404,2.86e-10,33;CL:0000393,1.57e-07,39;CL:0000211,1.57e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.43e-21!52;UBERON:0005068!6.43e-21!52;UBERON:0006241!6.43e-21!52;UBERON:0007135!6.43e-21!52;UBERON:0000955!2.58e-19!50;UBERON:0006238!2.58e-19!50;UBERON:0000033!6.39e-19!63;UBERON:0002346!8.60e-19!71;UBERON:0003075!8.60e-19!71;UBERON:0007284!8.60e-19!71;UBERON:0002020!9.42e-19!34;UBERON:0001017!1.22e-18!73;UBERON:0005743!1.22e-18!73;UBERON:0002616!1.46e-18!49;UBERON:0003056!4.03e-18!49;UBERON:0000073!9.59e-18!75;UBERON:0001016!9.59e-18!75;UBERON:0003080!1.73e-17!40;UBERON:0002780!5.09e-17!39;UBERON:0001890!5.09e-17!39;UBERON:0006240!5.09e-17!39;UBERON:0002791!1.92e-15!29;UBERON:0003528!1.92e-15!29;UBERON:0001893!1.92e-15!29;UBERON:0004121!1.01e-14!102;UBERON:0000924!1.01e-14!102;UBERON:0006601!1.01e-14!102;UBERON:0000956!1.07e-10!21;UBERON:0001869!1.07e-10!21;UBERON:0000203!1.07e-10!21;UBERON:0000153!5.97e-10!94;UBERON:0007811!2.86e-09!86;UBERON:0002619!5.97e-09!17;UBERON:0002021!2.17e-08!10;UBERON:0000411!2.17e-08!10;UBERON:0001950!2.17e-08!10;UBERON:0000025!7.15e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.28e-28,54;UBERON:0001049,1.03e-26,52;UBERON:0005068,1.03e-26,52;UBERON:0006241,1.03e-26,52;UBERON:0007135,1.03e-26,52;UBERON:0002020,1.67e-26,34;UBERON:0000955,7.47e-23,47;UBERON:0006238,7.47e-23,47;UBERON:0002346,8.79e-23,64;UBERON:0003075,8.79e-23,64;UBERON:0007284,8.79e-23,64;UBERON:0001017,1.06e-22,73;UBERON:0002616,7.74e-22,46;UBERON:0003528,7.74e-22,29;UBERON:0002791,7.74e-22,29;UBERON:0001893,7.74e-22,29;UBERON:0001016,1.34e-21,75;UBERON:0003080,3.94e-21,40;UBERON:0002780,1.74e-20,39;UBERON:0001890,1.74e-20,39;UBERON:0006240,1.74e-20,39;UBERON:0003056,4.39e-19,49;UBERON:0010371,8.04e-19,73;UBERON:0004121,4.00e-17,95;UBERON:0000924,4.00e-17,95;UBERON:0006601,4.00e-17,95;UBERON:0000956,3.74e-15,21;UBERON:0001869,3.74e-15,21;UBERON:0000203,3.74e-15,21;UBERON:0002619,1.03e-12,17;UBERON:0010314,1.48e-11,92;UBERON:0002021,4.16e-11,10;UBERON:0000411,4.16e-11,10;UBERON:0001950,4.16e-11,10;UBERON:0002420,7.33e-08,8;UBERON:0007245,7.33e-08,8;UBERON:0010009,7.33e-08,8;UBERON:0010011,7.33e-08,8;UBERON:0000454,7.33e-08,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,14.566785181891,12.1667925232568,6.97214543856797,0,0,0,0,0,0,0.384218305321555,3.42175720617976,2.29510095163874,1.47227472945967,4.28476476605705,4.8591079009355,6.36952155917761,5.271500906003,7.35375029288017,2.20231761998777,2.93680877595932,1.53606533256243,7.12185953743047,7.50198677539759,8.33461392890816,2.23346399201105,2.8138130501584,4.88954392885792,8.83885756421003,12.2439645487229,8.57437450796383,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.97180787687353,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.173485326766136,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.722996784599558,0,0.323533699894818,0,0,0,3.51336956413857,2.09446706813455,0,0,0,0,2.69623150928681,11.4375150704657,19.0994615211554,11.6462294528825,13.0414883238469,3.32460871295296,8.11206315338788,0.203678727700633,0.124406970610093,0,0.210441855886474,0.910843100738926,0.229902104433473,0.180062129805349,0.452114453507145,2.65342346690179,2.0498195245576,1.21812241927647,1.29351685369508,0,0.945530400839096,1.58356011747554,1.09597866213787,1.39023624612799,0.348252166522167,0.61734640922383,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0.439100230582101,0,5.46753866266731,5.76265829323993,0,0,0.853153002140936,0.696710015581316,0.644337306610467,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0,0.948339504765408,1.71372768914593,2.25415471346161,2.03651327845314,0.387904974335251,1.33258057791605,3.41477300470989,0.295220295959204,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,1.51593129416388,1.46668478797823,2.03694102930226,1.17345124144251,0.670025029767263,0.714130922658041,0,1.26108115284953,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,2.56880943980467,1.75817529888305,0,0,0,0,0.430846795465598,0.238968797952552,0,0.849229592366497,0,0,0,14.4594592389813,0,0.712262414669021,0.488660878060728,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.646793418913773,1.07168517515796,0.354680467284547,1.07021290561242,1.15184314421485,1.522324745573,0,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0,0.164140899745061,0,1.29797711407357,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0.418176592028937,0.218362563746178,0,0.578574190077352,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.93841237725591,1.46521299413812,0.643105137237198,0,17.5073071211291,12.4287813856938,16.6139698897425,11.8578695817144,14.3867329151835,12.0863023582352,8.77529250301348,8.55610286126019,5.43770890781046,9.83744592328458,0.103787347584177,1.19707462020309,1.02440163452481,3.16038732188782,1.04806581313991,1.10306105070008,2.44471400581777,3.5025959730612,2.88827288632634,3.79045817645696,3.8021894983536,3.01802146217722,1.77918864192777,2.88113185821912,2.1825478203133,1.90517476513229,1.50649623728312,2.31491064556446,2.06042950401653,2.79677948255355,1.71434626192708,1.4198064492747,2.62279808942053,2.47088908274958,2.63506265162926,2.28459441307527,3.29270351170991,1.57841826862706,2.98769050460896,3.92799590160417,1.66089025373844,2.26560309463796,4.09231043169689,2.47898945897546,1.35034627686799,4.74640098082097,3.50897412668113,2.57845264857958,0.956441660344217,0.882365676478062,0.927471342481686
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.367093504323363,0,0,0,0,0.279972843250725,0,0,0,0,0,0,0,14.566785181891,12.1667925232568,6.97214543856797,0,0,0,0,0,0,0.384218305321555,3.42175720617976,2.29510095163874,1.47227472945967,4.28476476605705,4.8591079009355,6.36952155917761,5.271500906003,7.35375029288017,2.20231761998777,2.93680877595932,1.53606533256243,7.12185953743047,7.50198677539759,8.33461392890816,2.23346399201105,2.8138130501584,4.88954392885792,8.83885756421003,12.2439645487229,8.57437450796383,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,1.97180787687353,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0.173485326766136,0.608930956624282,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.722996784599558,0,0.323533699894818,0,0,0,3.51336956413857,2.09446706813455,0,0,0,0,2.69623150928681,11.4375150704657,19.0994615211554,11.6462294528825,13.0414883238469,3.32460871295296,8.11206315338788,0.203678727700633,0.124406970610093,0,0.210441855886474,0.910843100738926,0.229902104433473,0.180062129805349,0.452114453507145,2.65342346690179,2.0498195245576,1.21812241927647,1.29351685369508,0,0.945530400839096,1.58356011747554,1.09597866213787,1.39023624612799,0.348252166522167,0.61734640922383,1.19420560091096,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0.439100230582101,0,5.46753866266731,5.76265829323993,0,0,0.853153002140936,0.696710015581316,0.644337306610467,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.502670417600539,0,0.19496408711912,0,0,0,0.948339504765408,1.71372768914593,2.25415471346161,2.03651327845314,0.387904974335251,1.33258057791605,3.41477300470989,0.295220295959204,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,1.51593129416388,1.46668478797823,2.03694102930226,1.17345124144251,0.670025029767263,0.714130922658041,0,1.26108115284953,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,2.56880943980467,1.75817529888305,0,0,0,0,0.430846795465598,0.238968797952552,0,0.849229592366497,0,0,0,14.4594592389813,0,0.712262414669021,0.488660878060728,0.164970122972535,1.32745138339963,0,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0.646793418913773,1.07168517515796,0.354680467284547,1.07021290561242,1.15184314421485,1.522324745573,0,0,0.220528398054962,0,0.161464426695906,0.241251699712623,0,0.164140899745061,0,1.29797711407357,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.432021363287205,0.418176592028937,0.218362563746178,0,0.578574190077352,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.93841237725591,1.46521299413812,0.643105137237198,0,17.5073071211291,12.4287813856938,16.6139698897425,11.8578695817144,14.3867329151835,12.0863023582352,8.77529250301348,8.55610286126019,5.43770890781046,9.83744592328458,0.103787347584177,1.19707462020309,1.02440163452481,3.16038732188782,1.04806581313991,1.10306105070008,2.44471400581777,3.5025959730612,2.88827288632634,3.79045817645696,3.8021894983536,3.01802146217722,1.77918864192777,2.88113185821912,2.1825478203133,1.90517476513229,1.50649623728312,2.31491064556446,2.06042950401653,2.79677948255355,1.71434626192708,1.4198064492747,2.62279808942053,2.47088908274958,2.63506265162926,2.28459441307527,3.29270351170991,1.57841826862706,2.98769050460896,3.92799590160417,1.66089025373844,2.26560309463796,4.09231043169689,2.47898945897546,1.35034627686799,4.74640098082097,3.50897412668113,2.57845264857958,0.956441660344217,0.882365676478062,0.927471342481686
|short_description=p4@Negr1
}}
}}

Latest revision as of 20:24, 1 October 2015

Short description:p4@Negr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Negr1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 126bp_to_ENSMUST00000106065_5end
EntrezGene:Negr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Negr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C314.57
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.51
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F119.10
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F213.04
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I914.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A117.51
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.61
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.18e-1823
neuroblast (sensu Vertebrata)2.18e-1823
neuron2.86e-1033
neuronal stem cell2.86e-1033
neuroblast2.86e-1033
electrically signaling cell2.86e-1033
electrically responsive cell1.57e-0739
electrically active cell1.57e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.28e-2854
neural tube1.03e-2652
neural rod1.03e-2652
future spinal cord1.03e-2652
neural keel1.03e-2652
gray matter1.67e-2634
brain7.47e-2347
future brain7.47e-2347
neurectoderm8.79e-2364
neural plate8.79e-2364
presumptive neural plate8.79e-2364
central nervous system1.06e-2273
regional part of brain7.74e-2246
brain grey matter7.74e-2229
regional part of telencephalon7.74e-2229
telencephalon7.74e-2229
nervous system1.34e-2175
anterior neural tube3.94e-2140
regional part of forebrain1.74e-2039
forebrain1.74e-2039
future forebrain1.74e-2039
pre-chordal neural plate4.39e-1949
ecto-epithelium8.04e-1973
ectoderm-derived structure4.00e-1795
ectoderm4.00e-1795
presumptive ectoderm4.00e-1795
cerebral cortex3.74e-1521
cerebral hemisphere3.74e-1521
pallium3.74e-1521
regional part of cerebral cortex1.03e-1217
structure with developmental contribution from neural crest1.48e-1192
occipital lobe4.16e-1110
visual cortex4.16e-1110
neocortex4.16e-1110
basal ganglion7.33e-088
nuclear complex of neuraxis7.33e-088
aggregate regional part of brain7.33e-088
collection of basal ganglia7.33e-088
cerebral subcortex7.33e-088
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