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FFCP PHASE1:Mm9::chr3:84063622..84063650,-: Difference between revisions

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(Created page with "{{FFCP |id=chr3:84063622..84063650,- |short_description=p5@Trim2 |description=CAGE_peak_5_at_Trim2_5end |association_with_transcript=49bp_to_uc008ppx.2_5end |EntrezGene=8...")
 
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{{FFCP
{{FFCP
|id=chr3:84063622..84063650,-
|DHSsupport=NA
|short_description=p5@Trim2
|DPIdataset=NA
|description=CAGE_peak_5_at_Trim2_5end
|association_with_transcript=49bp_to_uc008ppx.2_5end
|EntrezGene=80890
|EntrezGene=80890
|HGNC=
|HGNC=
|MCL_coexpression_id=2382
|TSSclassifier=NA
|UniProt=Q3UHH4
|UniProt=Q3UHH4
|association_with_transcript=49bp_to_uc008ppx.2_5end
|cluster_id=chr3:84063622..84063650,-
|description=CAGE_peak_5_at_Trim2_5end
|id=chr3:84063622..84063650,-
|ontology_enrichment_celltype=CL:0000393!5.12e-11!39;CL:0000211!5.12e-11!39;CL:0000540!4.80e-10!33;CL:0000047!4.80e-10!33;CL:0000031!4.80e-10!33;CL:0000404!4.80e-10!33;CL:0000117!5.58e-08!23;CL:0000337!5.58e-08!23;CL:0000055!6.58e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000393,2.87e-11,39;CL:0000211,2.87e-11,39;CL:0000540,1.63e-10,33;CL:0000047,1.63e-10,33;CL:0000031,1.63e-10,33;CL:0000404,1.63e-10,33;CL:0000117,2.46e-08,23;CL:0000337,2.46e-08,23;CL:0002319,6.21e-07,43;CL:0000221,8.40e-07,44;CL:0000133,8.40e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.75e-20,95;UBERON:0000924,5.75e-20,95;UBERON:0006601,5.75e-20,95;UBERON:0010371,3.19e-17,73;UBERON:0001016,1.22e-16,75;UBERON:0001017,3.41e-16,73;UBERON:0000073,1.74e-14,54;UBERON:0002346,2.29e-14,64;UBERON:0003075,2.29e-14,64;UBERON:0007284,2.29e-14,64;UBERON:0002020,2.16e-13,34;UBERON:0001049,2.28e-13,52;UBERON:0005068,2.28e-13,52;UBERON:0006241,2.28e-13,52;UBERON:0007135,2.28e-13,52;UBERON:0000955,3.61e-11,47;UBERON:0006238,3.61e-11,47;UBERON:0003528,3.69e-11,29;UBERON:0002791,3.69e-11,29;UBERON:0001893,3.69e-11,29;UBERON:0010314,8.94e-11,92;UBERON:0002616,1.37e-10,46;UBERON:0004111,3.14e-10,122;UBERON:0003056,1.47e-09,49;UBERON:0003080,4.04e-09,40;UBERON:0002780,1.48e-08,39;UBERON:0001890,1.48e-08,39;UBERON:0006240,1.48e-08,39;UBERON:0000025,1.83e-08,114;UBERON:0000956,3.76e-08,21;UBERON:0001869,3.76e-08,21;UBERON:0000203,3.76e-08,21;UBERON:0007023,8.20e-08,51;UBERON:0002619,5.05e-07,17;UBERON:0002021,6.76e-07,10;UBERON:0000411,6.76e-07,10;UBERON:0001950,6.76e-07,10
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|phase1_expression=3.20297694209588,1.74487703819681,0.909998478779072,1.81478526784098,3.50627010962443,1.00727563147134,0.700837921786577,0.387369970324729,0.281577444303333,0,0.513653904676515,0,0.513602189793617,0.262261207256992,0,0,0,0,0,0.42438965179803,4.25216450755349,0.0992909512008853,0,0.799962113967033,0.91763712426868,1.72269589234506,1.29228598847722,1.07735616342945,2.28028103347649,2.52030129759931,1.10865255327652,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,6.16894408080329,5.98123894195136,5.32285581268876,0,1.30815093828268,2.41654801007919,0.777719596297134,0.139986421625363,0,0,0,1.00828139742739,3.08711323243136,0.85960031981627,2.06268836910977,3.84401275633236,3.70293685490423,1.90149421051854,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,3.21437798156281,3.64516033495565,3.15487442027073,4.28476476605705,4.19650227808066,3.1847607795888,2.20444583341944,2.75765635983006,9.91042928994498,8.2996769755372,9.06278546211836,3.56092976871523,2.8361169516747,3.64639359389732,9.49222196604695,6.19038871034848,8.09830713217094,6.48182888042069,5.83723891276322,5.59198337475902,3.3319525066601,3.17400552448499,2.89864488701678,3.44169550792555,4.0798280022465,1.61910957491345,5.19821133958135,2.24013443548668,1.68533304158102,1.87473354835864,2.85764605063156,2.12003744706204,1.40843419776681,3.84979432242953,0,0,1.29894624606728,1.77351905832569,1.01104889002957,2.8545969929765,3.10725460376606,4.75014845007439,1.38788261412909,5.1759131313064,4.84292544237723,5.27529241934179,4.8211369925639,6.28332956648377,0.494389935468748,2.31358971071859,0.884610551949874,1.29413479957927,1.10420759230197,0.969750506270444,3.72783522436244,9.9545470983926,13.1951425292477,2.04365644166873,0.11981512450592,0,0.381210681219194,12.5824137100051,10.0650132620098,3.39266750704734,14.2535942557667,16.1100738118108,8.51930982694196,10.058958310201,4.48093200941392,3.98102305952298,8.33985102831127,1.47309299120532,0.650602214813519,2.06911893990126,2.16074555766419,2.56198190320716,4.89862793889561,2.8185018462667,4.49768277886698,3.3631438196072,0,0.189106080167819,0.879755620819744,1.31517439456545,2.50242524303038,2.43776516565517,1.4404749548556,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.617068451549513,0,1.07309360559848,1.98501082024188,0.987359099480883,0.492502392237286,0.891756905004413,2.19299981137998,1.09775057645525,2.41571553768669,17.6643556793867,6.79170441703277,4.62586296177317,3.96675849995316,0,0.696710015581316,0.644337306610467,0.80673409849337,1.11189021922435,0.570676878337677,2.84717436926707,0.823494773620054,1.25667604400135,1.39269530428806,1.9496408711912,0,2.16138049874694,3.98282546508734,0,0.913988100877831,1.1270773567308,1.83286195060783,1.74557238450863,2.38461787627083,3.41477300470989,3.69025369949005,5.80895293013087,5.30607804863742,2.66807364378434,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.972811360650212,1.09824565275233,4.31304619582064,2.97712758134803,1.87222603868736,5.80931419278357,5.38192240565737,6.27176577772377,4.0645701836653,0.37898282354097,0.488894929326078,0.169745085775188,0.704070744865506,0.837531287209079,0.952174563544055,2.53673742215138,1.57635144106191,1.7717175171902,3.34855014180723,3.4411296090305,3.45369963731791,3.7608755231193,0,0,3.93411418415229,4.41498794087572,17.9816660786327,14.7686725106176,5.57378814280696,2.01976741763498,3.78609863299508,1.56175497718655,4.73931475012158,3.82350076724083,4.90157082981267,3.67999490025482,2.83367491172426,3.21481443702443,5.13874111330481,10.9249247583414,3.97432238583152,0.890328018336276,2.11753047159649,3.95928295134085,0,0.485561272309963,0,0.565815239267694,0,0,2.32585463851399,1.09060118843252,0,0.632073515871632,1.05418608574999,0,4.42571487479924,0.36012218806262,0.646793418913773,0.214337035031592,1.41872186913819,0.178368817602071,0.493647061806363,1.8267896946876,1.17335854031855,0.42366414172764,8.82113592219848,6.76033637060068,3.87514624070173,3.5584625707612,4.53614907211919,6.23735419031233,2.33184669303881,17.4299783889879,0.512612642393558,0.619160603889667,0.740778109478847,0.188368457004691,0.27338845544205,0.228778173206523,1.01987057996313,0.419854356970974,0.690999869022119,0.954670618015114,0.474503990371703,1.21991680276109,2.05210147561422,2.09088296014469,1.31017538247707,3.37160865962052,3.05817786183743,1.04702376793612,2.07383957266869,6.21339313086926,0,0.299033092087958,0.496375471371293,0.972255941720238,1.6790777052105,1.01373675294467,3.28600268208111,1.17183946359555,0.838874755405687,0,0.576060012515731,0.316011120628178,0.810900861160657,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0,0.100966449948148,0,0.201652370273681,0.487289403698762,0,0.116876902181569,1.58711268530648,0,0.0897138566094757,0,2.70465431645067,4.31669693537719,2.93042598827624,4.28736758158132,6.52043735245972,5.0827665835536,6.90487854760765,4.01026859407578,5.84300819968538,6.85082519770642,12.0863023582352,6.75022500231806,9.00642406448441,14.0474146785103,8.28416498802912,0.830298780673413,1.19707462020309,1.19513524027894,1.70174701947806,1.88651846365184,1.83843508450014,2.22246727801615,1.44224540067226,1.28367683836726,1.76888048234658,1.2673964994512,2.45214243801899,2.34103768674706,1.98477972455095,2.1825478203133,1.42888107384922,2.89710814862139,1.73618298417335,0.412085900803307,1.91358596174717,1.02860775715625,1.4198064492747,1.66905332963125,1.74415699958794,2.25862512996793,1.4384483341585,1.09756783723664,0.526139422875686,1.90125759384206,1.12228454331548,2.60997039873183,1.77308068276014,2.04615521584845,2.01417893541756,1.54325288784913,1.49886346762768,1.40358965067245,1.93383948643468,3.63447830930802,1.98532277207564,1.15933917810211
|short_description=p5@Trim2
}}
}}

Latest revision as of 18:28, 25 September 2015

Short description:p5@Trim2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Trim2_5end
Coexpression cluster:MCL_coexpression_mm9:2382
Association with transcript: 49bp_to_uc008ppx.2_5end
EntrezGene:Trim2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Trim2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F93.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.41
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F55.28
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I36.28
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B29.95
cerebellum, neonate N30.CNhs11135.1395-42I213.20
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A412.58
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G84.50
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.99
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.42
hippocampus, adult.CNhs10478.13-16E817.66
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D53.41
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F35.81
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A35.81
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.41
medulla oblongata, adult.CNhs10477.17-12C217.98
medulla oblongata, neonate N30.CNhs11200.1396-42A314.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I910.92
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C36.76
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H33.56
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C917.43
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell2.87e-1139
electrically active cell2.87e-1139
neuron1.63e-1033
neuronal stem cell1.63e-1033
neuroblast1.63e-1033
electrically signaling cell1.63e-1033
CNS neuron (sensu Vertebrata)2.46e-0823
neuroblast (sensu Vertebrata)2.46e-0823
neural cell6.21e-0743
ectodermal cell8.40e-0744
neurectodermal cell8.40e-0744

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.75e-2095
ectoderm5.75e-2095
presumptive ectoderm5.75e-2095
ecto-epithelium3.19e-1773
nervous system1.22e-1675
central nervous system3.41e-1673
regional part of nervous system1.74e-1454
neurectoderm2.29e-1464
neural plate2.29e-1464
presumptive neural plate2.29e-1464
gray matter2.16e-1334
neural tube2.28e-1352
neural rod2.28e-1352
future spinal cord2.28e-1352
neural keel2.28e-1352
brain3.61e-1147
future brain3.61e-1147
brain grey matter3.69e-1129
regional part of telencephalon3.69e-1129
telencephalon3.69e-1129
structure with developmental contribution from neural crest8.94e-1192
regional part of brain1.37e-1046
anatomical conduit3.14e-10122
pre-chordal neural plate1.47e-0949
anterior neural tube4.04e-0940
regional part of forebrain1.48e-0839
forebrain1.48e-0839
future forebrain1.48e-0839
tube1.83e-08114
cerebral cortex3.76e-0821
cerebral hemisphere3.76e-0821
pallium3.76e-0821
adult organism8.20e-0851
regional part of cerebral cortex5.05e-0717
occipital lobe6.76e-0710
visual cortex6.76e-0710
neocortex6.76e-0710
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