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FFCP PHASE1:Mm9::chr3:94114017..94114066,+: Difference between revisions

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(Created page with "{{FFCP |id=chr3:94114017..94114066,+ |short_description=p1@Them4 |description=CAGE_peak_1_at_Them4_5end |association_with_transcript=0bp_to_ENSMUST00000142178,ENSMUST00000...")
 
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{{FFCP
{{FFCP
|id=chr3:94114017..94114066,+
|DHSsupport=NA
|short_description=p1@Them4
|DPIdataset=NA
|description=CAGE_peak_1_at_Them4_5end
|association_with_transcript=0bp_to_ENSMUST00000142178,ENSMUST00000151753,NM_029431,uc008qfs.1,uc008qft.1,uc008qfu.1_5end
|EntrezGene=75778
|EntrezGene=75778
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q3UUI3,Q3USX4
|UniProt=Q3UUI3,Q3USX4
|association_with_transcript=0bp_to_ENSMUST00000142178,ENSMUST00000151753,NM_029431,uc008qfs.1,uc008qft.1,uc008qfu.1_5end
|cluster_id=chr3:94114017..94114066,+
|description=CAGE_peak_1_at_Them4_5end
|id=chr3:94114017..94114066,+
|ontology_enrichment_celltype=CL:0000117!2.87e-12!23;CL:0000337!2.87e-12!23;CL:0000540!2.74e-07!33;CL:0000047!2.74e-07!33;CL:0000031!2.74e-07!33;CL:0000404!2.74e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.31e-12,23;CL:0000337,2.31e-12,23;CL:0000540,4.01e-07,33;CL:0000047,4.01e-07,33;CL:0000031,4.01e-07,33;CL:0000404,4.01e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.83e-19!52;UBERON:0005068!1.83e-19!52;UBERON:0006241!1.83e-19!52;UBERON:0007135!1.83e-19!52;UBERON:0007811!2.06e-18!86;UBERON:0000955!2.90e-18!50;UBERON:0006238!2.90e-18!50;UBERON:0002616!1.19e-17!49;UBERON:0000033!6.66e-17!63;UBERON:0002020!1.50e-16!34;UBERON:0000153!3.15e-16!94;UBERON:0003080!6.74e-16!40;UBERON:0001017!1.28e-15!73;UBERON:0005743!1.28e-15!73;UBERON:0002780!2.12e-15!39;UBERON:0001890!2.12e-15!39;UBERON:0006240!2.12e-15!39;UBERON:0000073!4.76e-15!75;UBERON:0001016!4.76e-15!75;UBERON:0003056!6.72e-15!49;UBERON:0002346!7.31e-15!71;UBERON:0003075!7.31e-15!71;UBERON:0007284!7.31e-15!71;UBERON:0002791!8.22e-14!29;UBERON:0003528!8.22e-14!29;UBERON:0001893!8.22e-14!29;UBERON:0004121!3.21e-11!102;UBERON:0000924!3.21e-11!102;UBERON:0006601!3.21e-11!102;UBERON:0000956!7.17e-10!21;UBERON:0001869!7.17e-10!21;UBERON:0000203!7.17e-10!21;UBERON:0002619!4.60e-08!17;UBERON:0002021!6.40e-08!10;UBERON:0000411!6.40e-08!10;UBERON:0001950!6.40e-08!10;UBERON:0000064!8.17e-08!99
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.94e-20,54;UBERON:0001049,3.17e-19,52;UBERON:0005068,3.17e-19,52;UBERON:0006241,3.17e-19,52;UBERON:0007135,3.17e-19,52;UBERON:0010314,2.55e-17,92;UBERON:0000955,1.79e-16,47;UBERON:0006238,1.79e-16,47;UBERON:0002346,2.30e-16,64;UBERON:0003075,2.30e-16,64;UBERON:0007284,2.30e-16,64;UBERON:0002020,2.56e-16,34;UBERON:0002616,7.16e-16,46;UBERON:0003080,1.08e-15,40;UBERON:0001017,3.32e-15,73;UBERON:0002780,3.41e-15,39;UBERON:0001890,3.41e-15,39;UBERON:0006240,3.41e-15,39;UBERON:0003056,1.01e-14,49;UBERON:0001016,1.20e-14,75;UBERON:0003528,1.45e-13,29;UBERON:0002791,1.45e-13,29;UBERON:0001893,1.45e-13,29;UBERON:0010371,2.01e-13,73;UBERON:0004121,7.42e-12,95;UBERON:0000924,7.42e-12,95;UBERON:0006601,7.42e-12,95;UBERON:0000956,1.32e-09,21;UBERON:0001869,1.32e-09,21;UBERON:0000203,1.32e-09,21;UBERON:0002021,5.63e-08,10;UBERON:0000411,5.63e-08,10;UBERON:0001950,5.63e-08,10;UBERON:0002619,8.66e-08,17
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|phase1_expression=2.08193501236232,3.14077866875425,2.27499619694768,2.41971369045464,2.50447864973174,1.51091344720701,2.33612640595526,3.87369970324729,1.12630977721333,2.57470978954193,3.4243593645101,4.22792442675283,5.9920255475922,3.84649770643589,0.333109761815663,1.01237633694913,0.699561878128147,1.57731082679119,3.42786084014347,0.84877930359606,11.0556277196391,0.794327609607082,0,2.87986361028132,1.83527424853736,2.29692785646008,0.86152399231815,3.01659725760245,2.47030445293286,2.26827116783938,2.21730510655305,0,0,0,2.3108129580102,1.16364251750945,2.45003227514843,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0,0.377690453926732,0.608261587317087,0.183546752161682,0.782391344348039,1.09012578190223,0.878744730937887,0.972149495371417,0.279972843250725,1.43752564364972,2.51673909086605,0.725362142011344,2.35265659399725,0.257259436035947,2.0057340795713,1.54701627683233,8.6996078169627,13.2247744818008,13.3104594736298,0,0,0,0,0,0.599200221036809,0.768436610643109,5.08079100311541,9.58542162155004,6.30974884054146,15.7108041422092,12.8103753751936,6.49201235839256,6.13411014516713,12.8690630125403,11.0115880999389,8.2996769755372,9.06278546211836,9.10015385338338,10.8870295886867,8.33461392890816,10.0505879640497,12.380777420697,7.02871939773326,10.606629077052,10.2507610175354,8.20157561631323,1.81742863999642,1.5870027622425,2.31891590961342,2.58127163094416,0,0.539703191637817,3.24888208723835,2.24013443548668,3.08977724289854,0.170430322578058,0,1.41335829804136,2.53518155598025,0,0,0,1.5154372870785,0.506719730950197,0,3.65388415100992,2.58937883647172,1.48442139064825,1.73485326766136,1.52232739156071,1.61430848079241,2.56228488939458,2.58695155698551,1.50799909595611,0.741584903203122,1.15679485535929,0.884610551949874,1.7794353494215,1.10420759230197,2.90925151881133,0,7.90508151931177,7.54008144528438,1.78819938646014,1.91704199209472,1.19980546198682,2.28726408731516,9.28701964309901,7.77751024791665,15.3298309577695,19.1206752211504,12.5300574091862,10.5971902725376,10.5456820994042,1.93494791315601,0.870848794270651,4.0435641349388,1.05220927943237,1.43132487258974,2.5289231487682,2.16074555766419,2.41127708537144,2.78949646520444,3.58718416797579,3.84177070694888,3.88055056108524,1.94011193639558,1.32374256117473,0.879755620819744,1.97276159184817,2.50242524303038,0.696504333044333,1.85203922767149,1.79130840136644,0.702213187313235,1.28673953557358,2.27330799516474,4.34964122324554,2.11073453982987,2.88099298337624,2.84093682702252,2.95146347621106,3.70241070929708,3.48800917125612,4.02410102099429,2.6856028744449,4.27855609775049,6.40253109908471,5.26947262048062,7.74859933354261,9.00155472693308,5.90508242545636,15.3511662451813,19.0373532901676,2.97376904685418,1.58670339998127,2.13288250535234,0.928946687441754,2.70621668776396,1.81515172161008,0.889512175379481,2.09248188723815,0.949058123089023,1.97638745668813,2.26201687920243,2.38747766449381,1.55971269695296,1.79763881730844,1.94524244887225,3.18626037206988,1.89667900953082,0.913988100877831,3.38123207019241,1.4255592949172,1.55161989734101,1.61312385747733,1.64414996523069,2.21415221969403,1.56998727841375,3.33172342588861,1.1858105083486,1.00107063429656,1.17935397067922,0.899448449539415,0.811440485554012,1.20588579876208,0.25462585178142,0.287696137450811,1.45921704097532,1.92192989231657,1.43768206527355,1.86070473834252,0.936113019343682,0.505157755894224,1.79397413521912,2.41221760681684,1.47802552133284,2.27389694124582,1.14075483509418,0.848725428875941,1.64283173801951,1.17254380209271,1.42826184531608,0.975668239288994,0.945810864637146,1.10732344824387,0.956728611944923,0.983179888294428,1.72684981865896,1.15719246865209,1.50791283939272,0.54390568381871,1.47529281905711,0.551873492609465,14.4495530989013,11.4867452860359,0.819674726883377,2.01976741763498,0.94652465824877,1.17131623288992,1.50796378412959,1.43381278771531,1.55959071857676,2.26461224631066,1.61924280669958,0.876767573733936,2.76701444562566,13.8168166061377,0.851640511249612,1.95872164033981,1.95464351224291,1.15479086080775,0,1.94224508923985,1.209294227859,0.943025398779491,0,2.76691633149535,1.55056975900933,1.09060118843252,0.356497378384721,0.632073515871632,1.05418608574999,0,3.74483566329167,2.16073312837572,1.68166288917581,1.92903331528433,3.3694644392032,9.45354733290974,10.2020392773315,7.00269382963578,3.05073220482823,1.27099242518292,0.661585194164886,2.14352128823924,1.77610869365496,1.5078231232039,1.79058516004705,1.31312719796049,0.291480836629851,10.5692422145991,0.854354403989263,1.65109494370578,1.66675074632741,0.376736914009382,0.683471138605126,1.14389086603261,1.35982743995084,1.39951452323658,1.38199973804424,1.90934123603023,1.10717597753397,2.23651413839534,2.37611749807963,1.88179466413022,1.09181281873089,1.21377911746339,1.48776220305605,1.57053565190418,2.46268449254406,1.86401793926078,62.5699161939451,2.0932316446157,3.30916980914195,1.16670713006429,2.32487682259916,1.520605129417,1.5256441023948,1.69265700297135,3.8797957437513,36.4792022447269,23.3304305068871,6.63623353319174,1.41907650703115,2.46506297195585,2.7283372825337,5.37080087002444,4.56967115996909,3.60586348559907,3.98761723371358,4.34155734777035,6.09654453239999,3.83139503519994,5.06780979846713,3.94468550725351,4.44132228289962,2.49403421976732,2.21985953374065,3.49884040776955,1.84673078000486,1.54551675225752,1.31377732815827,0.73260649706906,0.643105137237198,2.50786052017682,20.8958181768315,25.3178880078947,24.6345070778941,20.4505286988988,15.7568979547248,15.8632718451837,14.8504950050997,15.7612421128477,17.2194115413998,19.1571315348173,2.28332164685189,2.39414924040619,2.39027048055788,2.18796045361465,2.72497111416377,3.12533964365024,4.88942801163553,2.88449080134452,3.85103051510178,5.05394423527595,3.8021894983536,2.64076877940507,3.55837728385553,2.94515701062399,3.0440798546475,3.81034953026459,2.78122382267653,2.12200142510076,2.88460130562315,3.23837624295674,2.74295401908332,3.72699192934609,2.38436189947321,3.34296758254356,3.10560955370591,3.46919892355874,2.56099162021882,3.15683653725411,3.12349461845482,2.24456908663095,2.25406534435931,3.15214343601803,5.72923460437565,2.94379998253335,3.2794123866794,3.2475375131933,4.67863216890817,2.79332370262788,3.25190164517034,1.98532277207564,1.62307484934295
|short_description=p1@Them4
}}
}}

Latest revision as of 22:35, 25 September 2015

Short description:p1@Them4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Them4_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000142178, ENSMUST00000151753, NM_029431, uc008qfs.1, uc008qft.1, uc008qfu.1_5end
EntrezGene:Them4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Them4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.99
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.43
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D612.87
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.10
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.20
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A49.29
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F115.33
cortex, adult.CNhs10473.12-14D519.12
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G15.27
heart, neonate N20.CNhs11127.821-26I67.75
heart, neonate N25.CNhs11196.1351-25D39.00
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G119.04
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A311.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F510.20
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G562.57
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H336.48
testis, neonate N30.CNhs11130.1391-42E223.33
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.73
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D36.10
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A25.07
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G24.44
tongue, adult.CNhs10499.32-1B42.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A225.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.63
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I82.28
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.15
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.31e-1223
neuroblast (sensu Vertebrata)2.31e-1223
neuron4.01e-0733
neuronal stem cell4.01e-0733
neuroblast4.01e-0733
electrically signaling cell4.01e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.94e-2054
neural tube3.17e-1952
neural rod3.17e-1952
future spinal cord3.17e-1952
neural keel3.17e-1952
structure with developmental contribution from neural crest2.55e-1792
brain1.79e-1647
future brain1.79e-1647
neurectoderm2.30e-1664
neural plate2.30e-1664
presumptive neural plate2.30e-1664
gray matter2.56e-1634
regional part of brain7.16e-1646
anterior neural tube1.08e-1540
central nervous system3.32e-1573
regional part of forebrain3.41e-1539
forebrain3.41e-1539
future forebrain3.41e-1539
pre-chordal neural plate1.01e-1449
nervous system1.20e-1475
brain grey matter1.45e-1329
regional part of telencephalon1.45e-1329
telencephalon1.45e-1329
ecto-epithelium2.01e-1373
ectoderm-derived structure7.42e-1295
ectoderm7.42e-1295
presumptive ectoderm7.42e-1295
cerebral cortex1.32e-0921
cerebral hemisphere1.32e-0921
pallium1.32e-0921
occipital lobe5.63e-0810
visual cortex5.63e-0810
neocortex5.63e-0810
regional part of cerebral cortex8.66e-0817
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