FFCP PHASE1:Mm9::chr5:137462706..137462748,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:137462706..137462748,-
|short_description=p2@Znhit1
|description=CAGE_peak_2_at_Znhit1_5end
|association_with_transcript=0bp_to_uc009abh.1_5end
|EntrezGen...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70103 | |EntrezGene=70103 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R331 | |UniProt=Q8R331 | ||
|association_with_transcript=0bp_to_uc009abh.1_5end | |||
|cluster_id=chr5:137462706..137462748,- | |||
|description=CAGE_peak_2_at_Znhit1_5end | |||
|id=chr5:137462706..137462748,- | |||
|ontology_enrichment_celltype=CL:0002319!7.30e-17!43;CL:0000221!2.78e-16!44;CL:0000133!2.78e-16!44;CL:0000055!5.59e-16!50;CL:0002371!2.18e-14!118;CL:0002321!6.26e-14!70;CL:0000220!6.26e-14!70;CL:0000144!4.82e-13!121;CL:0000012!4.82e-13!121;CL:0000548!7.02e-13!115;CL:0000004!7.02e-13!115;CL:0000255!7.02e-13!115;CL:0000540!1.35e-12!33;CL:0000047!1.35e-12!33;CL:0000031!1.35e-12!33;CL:0000404!1.35e-12!33;CL:0000393!1.76e-11!39;CL:0000211!1.76e-11!39;CL:0000723!3.00e-10!91;CL:0000048!3.00e-10!91;CL:0000117!3.84e-10!23;CL:0000337!3.84e-10!23;CL:0000034!7.16e-09!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.30e-17,43;CL:0000221,2.78e-16,44;CL:0000133,2.78e-16,44;CL:0002321,6.26e-14,70;CL:0000540,1.35e-12,33;CL:0000047,1.35e-12,33;CL:0000031,1.35e-12,33;CL:0000404,1.35e-12,33;CL:0000393,1.76e-11,39;CL:0000211,1.76e-11,39;CL:0000723,3.00e-10,91;CL:0000048,3.00e-10,91;CL:0000117,3.84e-10,23;CL:0000337,3.84e-10,23;CL:0000034,7.16e-09,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.48e-18!73;UBERON:0005743!2.48e-18!73;UBERON:0000073!5.23e-18!75;UBERON:0001016!5.23e-18!75;UBERON:0004121!6.76e-12!102;UBERON:0000924!6.76e-12!102;UBERON:0006601!6.76e-12!102;UBERON:0001049!5.09e-11!52;UBERON:0005068!5.09e-11!52;UBERON:0006241!5.09e-11!52;UBERON:0007135!5.09e-11!52;UBERON:0002346!4.96e-10!71;UBERON:0003075!4.96e-10!71;UBERON:0007284!4.96e-10!71;UBERON:0002616!6.34e-10!49;UBERON:0000955!2.22e-09!50;UBERON:0006238!2.22e-09!50;UBERON:0000033!4.88e-08!63;UBERON:0003080!5.17e-07!40;UBERON:0002780!9.75e-07!39;UBERON:0001890!9.75e-07!39;UBERON:0006240!9.75e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.48e-18,73;UBERON:0001016,5.23e-18,75;UBERON:0004121,2.10e-12,95;UBERON:0000924,2.10e-12,95;UBERON:0006601,2.10e-12,95;UBERON:0000073,5.70e-12,54;UBERON:0001049,5.09e-11,52;UBERON:0005068,5.09e-11,52;UBERON:0006241,5.09e-11,52;UBERON:0007135,5.09e-11,52;UBERON:0002346,9.22e-11,64;UBERON:0003075,9.22e-11,64;UBERON:0007284,9.22e-11,64;UBERON:0010314,1.64e-09,92;UBERON:0002616,1.16e-08,46;UBERON:0000955,3.75e-08,47;UBERON:0006238,3.75e-08,47;UBERON:0010371,1.78e-07,73;UBERON:0003080,5.17e-07,40;UBERON:0002780,9.75e-07,39;UBERON:0001890,9.75e-07,39;UBERON:0006240,9.75e-07,39 | |||
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| ||
|short_description=p2@Znhit1 | |||
}} | }} |
Latest revision as of 14:17, 25 September 2015
Short description: | p2@Znhit1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Znhit1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_uc009abh.1_5end |
EntrezGene: | Znhit1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.30e-17 | 43 |
ectodermal cell | 2.78e-16 | 44 |
neurectodermal cell | 2.78e-16 | 44 |
embryonic cell | 6.26e-14 | 70 |
neuron | 1.35e-12 | 33 |
neuronal stem cell | 1.35e-12 | 33 |
neuroblast | 1.35e-12 | 33 |
electrically signaling cell | 1.35e-12 | 33 |
electrically responsive cell | 1.76e-11 | 39 |
electrically active cell | 1.76e-11 | 39 |
somatic stem cell | 3.00e-10 | 91 |
multi fate stem cell | 3.00e-10 | 91 |
CNS neuron (sensu Vertebrata) | 3.84e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-10 | 23 |
stem cell | 7.16e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.48e-18 | 73 |
nervous system | 5.23e-18 | 75 |
ectoderm-derived structure | 2.10e-12 | 95 |
ectoderm | 2.10e-12 | 95 |
presumptive ectoderm | 2.10e-12 | 95 |
regional part of nervous system | 5.70e-12 | 54 |
neural tube | 5.09e-11 | 52 |
neural rod | 5.09e-11 | 52 |
future spinal cord | 5.09e-11 | 52 |
neural keel | 5.09e-11 | 52 |
neurectoderm | 9.22e-11 | 64 |
neural plate | 9.22e-11 | 64 |
presumptive neural plate | 9.22e-11 | 64 |
structure with developmental contribution from neural crest | 1.64e-09 | 92 |
regional part of brain | 1.16e-08 | 46 |
brain | 3.75e-08 | 47 |
future brain | 3.75e-08 | 47 |
ecto-epithelium | 1.78e-07 | 73 |
anterior neural tube | 5.17e-07 | 40 |
regional part of forebrain | 9.75e-07 | 39 |
forebrain | 9.75e-07 | 39 |
future forebrain | 9.75e-07 | 39 |