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FFCP PHASE1:Mm9::chr6:28085081..28085111,-: Difference between revisions

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(Created page with "{{FFCP |id=chr6:28085081..28085111,- |short_description=p1@Grm8 |description=CAGE_peak_1_at_Grm8_5end |association_with_transcript=21bp_to_uc009bcl.1_5end |EntrezGene=148...")
 
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{{FFCP
{{FFCP
|id=chr6:28085081..28085111,-
|DHSsupport=NA
|short_description=p1@Grm8
|DPIdataset=NA
|description=CAGE_peak_1_at_Grm8_5end
|association_with_transcript=21bp_to_uc009bcl.1_5end
|EntrezGene=14823
|EntrezGene=14823
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=21bp_to_uc009bcl.1_5end
|cluster_id=chr6:28085081..28085111,-
|description=CAGE_peak_1_at_Grm8_5end
|id=chr6:28085081..28085111,-
|ontology_enrichment_celltype=CL:0000117!2.75e-07!23;CL:0000337!2.75e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,5.41e-10,23;CL:0000337,5.41e-10,23;CL:0000540,6.63e-07,33;CL:0000047,6.63e-07,33;CL:0000031,6.63e-07,33;CL:0000404,6.63e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.31e-19!71;UBERON:0003075!3.31e-19!71;UBERON:0007284!3.31e-19!71;UBERON:0000033!3.71e-18!63;UBERON:0003056!7.62e-17!49;UBERON:0001049!8.37e-16!52;UBERON:0005068!8.37e-16!52;UBERON:0006241!8.37e-16!52;UBERON:0007135!8.37e-16!52;UBERON:0001017!3.34e-15!73;UBERON:0005743!3.34e-15!73;UBERON:0000955!4.66e-15!50;UBERON:0006238!4.66e-15!50;UBERON:0002616!2.39e-14!49;UBERON:0000073!4.40e-14!75;UBERON:0001016!4.40e-14!75;UBERON:0000153!1.67e-13!94;UBERON:0004121!3.46e-13!102;UBERON:0000924!3.46e-13!102;UBERON:0006601!3.46e-13!102;UBERON:0007811!3.75e-13!86;UBERON:0003080!3.06e-12!40;UBERON:0002020!9.41e-12!34;UBERON:0002780!1.38e-11!39;UBERON:0001890!1.38e-11!39;UBERON:0006240!1.38e-11!39;UBERON:0002791!5.15e-09!29;UBERON:0003528!5.15e-09!29;UBERON:0001893!5.15e-09!29;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10;UBERON:0000468!5.76e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.02e-23,64;UBERON:0003075,1.02e-23,64;UBERON:0007284,1.02e-23,64;UBERON:0003056,2.35e-19,49;UBERON:0010371,8.26e-19,73;UBERON:0000073,1.70e-18,54;UBERON:0004121,1.17e-17,95;UBERON:0000924,1.17e-17,95;UBERON:0006601,1.17e-17,95;UBERON:0001017,5.99e-17,73;UBERON:0001049,1.47e-16,52;UBERON:0005068,1.47e-16,52;UBERON:0006241,1.47e-16,52;UBERON:0007135,1.47e-16,52;UBERON:0001016,4.26e-16,75;UBERON:0002020,2.49e-15,34;UBERON:0000955,2.72e-13,47;UBERON:0006238,2.72e-13,47;UBERON:0003080,5.27e-13,40;UBERON:0002616,2.07e-12,46;UBERON:0002780,3.91e-12,39;UBERON:0001890,3.91e-12,39;UBERON:0006240,3.91e-12,39;UBERON:0010314,8.57e-12,92;UBERON:0003528,2.24e-11,29;UBERON:0002791,2.24e-11,29;UBERON:0001893,2.24e-11,29;UBERON:0002021,1.75e-10,10;UBERON:0000411,1.75e-10,10;UBERON:0001950,1.75e-10,10;UBERON:0000970,6.06e-08,9;UBERON:0000019,6.06e-08,9;UBERON:0000047,6.06e-08,9;UBERON:0010312,6.06e-08,9;UBERON:0004088,6.06e-08,9;UBERON:0002104,6.06e-08,9;UBERON:0001456,6.06e-08,9;UBERON:0003072,6.06e-08,9;UBERON:0004128,6.06e-08,9;UBERON:0003071,6.06e-08,9;UBERON:0002420,1.16e-07,8;UBERON:0007245,1.16e-07,8;UBERON:0010009,1.16e-07,8;UBERON:0010011,1.16e-07,8;UBERON:0000454,1.16e-07,8;UBERON:0002619,9.04e-07,17
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.36069264241712,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,1.36100929351998,0,0,0,0,0,0,0,0,4.45096213891115,1.05798195854407,4.43681982454325,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,2.87129103237098,0,0.383381884072945,0,6.60695285996332,2.29837208553338,2.91852413186863,4.87979264601717,4.84884511092771,3.64639359389732,3.35019598801657,2.25105044012672,3.81995619442025,5.00868595305235,4.6982654663704,4.84638559145781,0,0,0,2.58127163094416,2.719885334831,8.63525106620507,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,5.99162557619291,2.28750301409313,1.25654352112864,6.08385120672968,4.34716277461562,3.1168206683934,2.59586020908412,0.101839363850316,0.248813941220186,0,1.68353484709179,1.04096354370163,1.83921683546778,2.88099407688559,5.27466862425003,4.150226448231,3.45907044769094,3.5606655332697,3.88055056108524,0.646703978798527,0.945530400839096,1.05570674498369,0.876782929710299,1.39023624612799,0,0,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0,0.232533944750408,0,0.350296027101508,0,0,0.162137619091711,0,0,0,1.47202963994889,0.514523061896422,0,0.793351699990633,0.853153002140936,1.62565670302307,4.76809606891745,3.63030344322017,2.2237804384487,1.52180500890047,0,0.823494773620054,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.995706366271836,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0,0,0,0,0,0,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,3.28192722458169,0,0,1.26203287766503,2.34263246577983,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,11.5675673911851,1.56134093729095,0.178065603667255,1.14020871547503,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0.680879211507576,1.62054984628179,1.03486947026204,1.92903331528433,0.709360934569094,1.24858172321449,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.120625849856312,0,0,0.874442509889552,1.29797711407357,0,1.65109494370578,0.555583582109135,0,0,0.228778173206523,0,0,0,1.90934123603023,0.949007980743406,2.03319467126849,1.94409613479242,1.46361807210128,1.09181281873089,0.674321731924103,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0,0.288030006257865,0.948033361884535,0.608175645870493,0.718976700153791,0,0.895133478337407,0.79472541912506,0,1.03382669022204,0.706765149637033,0.381034033274999,0.504130925684203,0.292373642219257,0.384847366561318,0.233753804363138,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,4.51801474093653,3.68260189205742,2.86447756719698,3.43706364687375,6.16574267793578,3.0215755895588,6.07520250208625,7.20513925158753,1.81256963593682,5.1776031175182,0.31136204275253,3.59122386060928,1.70733605754134,1.94485373654635,0.419226325255965,0.183843508450014,2.66696073361938,1.64828045791115,2.88827288632634,1.26348605881899,2.28131369901216,0.565879024158229,2.06011316433741,2.17685518176556,0.918967503289812,1.90517476513229,1.39061191133827,1.15745532278223,1.23625770240992,2.20798380201596,1.37147700954166,0.887379030796687,0.476872379894642,2.32554266611726,1.97629698872194,1.18460451048347,0.914639864363863,1.05227884575137,1.49384525230448,2.24456908663095,1.06771516311757,0.886540341380071,3.27384834535751,1.08455788830176,1.73615949883027,1.49886346762768,1.40358965067245,0.644613162144895,0.382576664137687,0.441182838239031,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.36069264241712,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,1.36100929351998,0,0,0,0,0,0,0,0,4.45096213891115,1.05798195854407,4.43681982454325,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,2.87129103237098,0,0.383381884072945,0,6.60695285996332,2.29837208553338,2.91852413186863,4.87979264601717,4.84884511092771,3.64639359389732,3.35019598801657,2.25105044012672,3.81995619442025,5.00868595305235,4.6982654663704,4.84638559145781,0,0,0,2.58127163094416,2.719885334831,8.63525106620507,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,5.99162557619291,2.28750301409313,1.25654352112864,6.08385120672968,4.34716277461562,3.1168206683934,2.59586020908412,0.101839363850316,0.248813941220186,0,1.68353484709179,1.04096354370163,1.83921683546778,2.88099407688559,5.27466862425003,4.150226448231,3.45907044769094,3.5606655332697,3.88055056108524,0.646703978798527,0.945530400839096,1.05570674498369,0.876782929710299,1.39023624612799,0,0,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0,0.232533944750408,0,0.350296027101508,0,0,0.162137619091711,0,0,0,1.47202963994889,0.514523061896422,0,0.793351699990633,0.853153002140936,1.62565670302307,4.76809606891745,3.63030344322017,2.2237804384487,1.52180500890047,0,0.823494773620054,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.995706366271836,0.379335801906163,0.342745537829186,0,0.203651327845314,0.193952487167626,0.350679099451593,0,0,0,0,0,0,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0.624075346229121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,4.0137647496948,3.28192722458169,0,0,1.26203287766503,2.34263246577983,0.215423397732799,0.477937595905104,0,0,0,0,0.395287777946524,11.5675673911851,1.56134093729095,0.178065603667255,1.14020871547503,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0.632073515871632,0,0,0.680879211507576,1.62054984628179,1.03486947026204,1.92903331528433,0.709360934569094,1.24858172321449,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.120625849856312,0,0,0.874442509889552,1.29797711407357,0,1.65109494370578,0.555583582109135,0,0,0.228778173206523,0,0,0,1.90934123603023,0.949007980743406,2.03319467126849,1.94409613479242,1.46361807210128,1.09181281873089,0.674321731924103,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0.419437377702843,0,0.288030006257865,0.948033361884535,0.608175645870493,0.718976700153791,0,0.895133478337407,0.79472541912506,0,1.03382669022204,0.706765149637033,0.381034033274999,0.504130925684203,0.292373642219257,0.384847366561318,0.233753804363138,0,0,0,0,0,0.187682475451182,0.73260649706906,0,0,4.51801474093653,3.68260189205742,2.86447756719698,3.43706364687375,6.16574267793578,3.0215755895588,6.07520250208625,7.20513925158753,1.81256963593682,5.1776031175182,0.31136204275253,3.59122386060928,1.70733605754134,1.94485373654635,0.419226325255965,0.183843508450014,2.66696073361938,1.64828045791115,2.88827288632634,1.26348605881899,2.28131369901216,0.565879024158229,2.06011316433741,2.17685518176556,0.918967503289812,1.90517476513229,1.39061191133827,1.15745532278223,1.23625770240992,2.20798380201596,1.37147700954166,0.887379030796687,0.476872379894642,2.32554266611726,1.97629698872194,1.18460451048347,0.914639864363863,1.05227884575137,1.49384525230448,2.24456908663095,1.06771516311757,0.886540341380071,3.27384834535751,1.08455788830176,1.73615949883027,1.49886346762768,1.40358965067245,0.644613162144895,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p1@Grm8
}}
}}

Latest revision as of 00:24, 27 September 2015

Short description:p1@Grm8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grm8_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 21bp_to_uc009bcl.1_5end
EntrezGene:Grm8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grm8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.41e-1023
neuroblast (sensu Vertebrata)5.41e-1023
neuron6.63e-0733
neuronal stem cell6.63e-0733
neuroblast6.63e-0733
electrically signaling cell6.63e-0733

Uber anatomy
Ontology termp-valuen
neurectoderm1.02e-2364
neural plate1.02e-2364
presumptive neural plate1.02e-2364
pre-chordal neural plate2.35e-1949
ecto-epithelium8.26e-1973
regional part of nervous system1.70e-1854
ectoderm-derived structure1.17e-1795
ectoderm1.17e-1795
presumptive ectoderm1.17e-1795
central nervous system5.99e-1773
neural tube1.47e-1652
neural rod1.47e-1652
future spinal cord1.47e-1652
neural keel1.47e-1652
nervous system4.26e-1675
gray matter2.49e-1534
brain2.72e-1347
future brain2.72e-1347
anterior neural tube5.27e-1340
regional part of brain2.07e-1246
regional part of forebrain3.91e-1239
forebrain3.91e-1239
future forebrain3.91e-1239
structure with developmental contribution from neural crest8.57e-1292
brain grey matter2.24e-1129
regional part of telencephalon2.24e-1129
telencephalon2.24e-1129
occipital lobe1.75e-1010
visual cortex1.75e-1010
neocortex1.75e-1010
eye6.06e-089
camera-type eye6.06e-089
simple eye6.06e-089
immature eye6.06e-089
ocular region6.06e-089
visual system6.06e-089
face6.06e-089
optic cup6.06e-089
optic vesicle6.06e-089
eye primordium6.06e-089
basal ganglion1.16e-078
nuclear complex of neuraxis1.16e-078
aggregate regional part of brain1.16e-078
collection of basal ganglia1.16e-078
cerebral subcortex1.16e-078
regional part of cerebral cortex9.04e-0717
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