FFCP PHASE1:Mm9::chr6:53018556..53018650,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:53018556..53018650,-
|short_description=p1@Jazf1
|description=CAGE_peak_1_at_Jazf1_5end
|association_with_transcript=0bp_to_ENSMUST00000074541,NM_173406,uc...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=231986 | |EntrezGene=231986 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=733 | |||
|TSSclassifier=NA | |||
|UniProt=Q80ZQ5 | |UniProt=Q80ZQ5 | ||
|association_with_transcript=0bp_to_ENSMUST00000074541,NM_173406,uc009bzb.2_5end | |||
|cluster_id=chr6:53018556..53018650,- | |||
|description=CAGE_peak_1_at_Jazf1_5end | |||
|id=chr6:53018556..53018650,- | |||
|ontology_enrichment_celltype=CL:0000540!3.90e-10!33;CL:0000047!3.90e-10!33;CL:0000031!3.90e-10!33;CL:0000404!3.90e-10!33;CL:0000117!5.07e-10!23;CL:0000337!5.07e-10!23;CL:0002319!2.53e-09!43;CL:0000221!4.00e-09!44;CL:0000133!4.00e-09!44;CL:0000393!3.04e-08!39;CL:0000211!3.04e-08!39;CL:0000055!2.36e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.55e-10,33;CL:0000047,3.55e-10,33;CL:0000031,3.55e-10,33;CL:0000404,3.55e-10,33;CL:0000117,4.62e-10,23;CL:0000337,4.62e-10,23;CL:0002319,2.32e-09,43;CL:0000221,3.69e-09,44;CL:0000133,3.69e-09,44;CL:0000393,3.63e-08,39;CL:0000211,3.63e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.84e-22!73;UBERON:0005743!2.84e-22!73;UBERON:0004121!2.47e-21!102;UBERON:0000924!2.47e-21!102;UBERON:0006601!2.47e-21!102;UBERON:0000073!2.72e-21!75;UBERON:0001016!2.72e-21!75;UBERON:0002346!9.21e-21!71;UBERON:0003075!9.21e-21!71;UBERON:0007284!9.21e-21!71;UBERON:0001049!5.38e-19!52;UBERON:0005068!5.38e-19!52;UBERON:0006241!5.38e-19!52;UBERON:0007135!5.38e-19!52;UBERON:0000033!1.01e-17!63;UBERON:0003056!1.73e-17!49;UBERON:0000955!2.43e-17!50;UBERON:0006238!2.43e-17!50;UBERON:0002616!4.25e-17!49;UBERON:0002020!1.52e-16!34;UBERON:0003080!4.00e-15!40;UBERON:0002780!9.63e-15!39;UBERON:0001890!9.63e-15!39;UBERON:0006240!9.63e-15!39;UBERON:0002791!2.95e-13!29;UBERON:0003528!2.95e-13!29;UBERON:0001893!2.95e-13!29;UBERON:0000468!1.00e-10!333;UBERON:0000956!7.49e-10!21;UBERON:0001869!7.49e-10!21;UBERON:0000203!7.49e-10!21;UBERON:0000025!9.76e-10!114;UBERON:0002619!1.58e-09!17;UBERON:0004111!6.85e-09!122;UBERON:0000153!1.27e-08!94;UBERON:0000922!5.87e-08!328;UBERON:0002021!1.25e-07!10;UBERON:0000411!1.25e-07!10;UBERON:0001950!1.25e-07!10;UBERON:0007811!3.67e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.28e-22,64;UBERON:0003075,1.28e-22,64;UBERON:0007284,1.28e-22,64;UBERON:0004121,1.71e-22,95;UBERON:0000924,1.71e-22,95;UBERON:0006601,1.71e-22,95;UBERON:0001017,2.26e-22,73;UBERON:0010314,1.93e-21,92;UBERON:0001016,2.20e-21,75;UBERON:0010371,6.83e-21,73;UBERON:0000073,1.58e-20,54;UBERON:0001049,4.45e-19,52;UBERON:0005068,4.45e-19,52;UBERON:0006241,4.45e-19,52;UBERON:0007135,4.45e-19,52;UBERON:0003056,1.45e-17,49;UBERON:0002020,1.29e-16,34;UBERON:0000955,5.76e-16,47;UBERON:0006238,5.76e-16,47;UBERON:0002616,1.00e-15,46;UBERON:0003080,3.45e-15,40;UBERON:0002780,8.35e-15,39;UBERON:0001890,8.35e-15,39;UBERON:0006240,8.35e-15,39;UBERON:0003528,2.59e-13,29;UBERON:0002791,2.59e-13,29;UBERON:0001893,2.59e-13,29;UBERON:0000956,6.84e-10,21;UBERON:0001869,6.84e-10,21;UBERON:0000203,6.84e-10,21;UBERON:0002619,1.45e-09,17;UBERON:0000025,1.77e-09,114;UBERON:0004111,1.20e-08,122;UBERON:0002021,1.17e-07,10;UBERON:0000411,1.17e-07,10;UBERON:0001950,1.17e-07,10;UBERON:0000922,1.20e-07,320 | |||
|phase1_expression=5.12476310735341,0,0,0,0,0,0.233612640595526,2.1950964985068,0.422366166455,1.63845168425395,0.34243593645101,0.319088635981346,0.513602189793617,2.18551006047494,0.666219523631325,1.01237633694913,0,0.315462165358238,0.959801035240171,0,19.0496969938396,0,0,0.47997726838022,0.68822784320151,0,0,0,0,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,1.5626706890476,0.523523743973798,0,0,0.485510353031154,3.14742044938943,2.33166941804883,0.917733760808408,4.69434806608824,18.7501634487184,12.9614847813338,12.8323733389027,6.15940255151595,5.75010257459886,0.335565212115473,2.90144856804538,0.672187598284928,10.8048963135098,8.30946975822394,4.64104883049698,20.636279007679,24.8625760257855,20.9164363157039,6.09920157724438,4.4464739805557,1.3498495759221,1.97773272513395,0.7104801149461,3.59520132622086,8.06858441175265,10.2652716185393,9.99043943654511,7.99234853135252,29.4220513935918,27.8294361599033,12.0040983230655,10.2554653989513,13.7882817991503,16.5173821499083,17.7485399938411,16.4358990584181,19.2553980086083,22.8719109006024,16.6692278578163,11.4465029590566,16.3201156909187,15.279824777681,50.6761167014708,44.8470794517174,37.0934897192348,4.01348824665875,2.72057616384428,5.79728977403356,0.860423876981386,2.719885334831,0.539703191637817,0.649776417447669,3.13618820968135,3.5111105032938,0.340860645156116,0.259786004602869,0,4.92951969218382,0,0,0,0.865964164044856,0.253359865475099,0,2.2836775943812,3.6251303710604,5.78924342352817,4.3371331691534,6.39377504455497,5.07354093963329,5.72746034099966,6.82014501387088,3.39299796590124,37.0792451601561,7.66376591675532,1.76922110389975,8.8971767471075,1.98757366614354,2.90925151881133,0,10.2473278954042,8.3778682725382,2.04365644166873,0.479260498023681,0,0.254140454146129,14.6794826616726,18.7575247155637,17.7172636479139,23.292458905765,19.4343747571051,14.1295870300501,15.7374025175725,12.1188842981876,3.6078021476927,3.0326731012041,7.57590681191306,8.45782879257574,9.19608417733892,16.7457780718975,15.2211866014072,15.4442853073514,15.5017601544668,13.3993466120412,15.78090561508,4.095791865724,11.3463648100692,17.7710635405588,16.001288467213,20.019401944243,13.5818344943645,15.2278780941878,1.79130840136644,0,0.51469581422943,0.284163499395593,6.62802472113606,10.5536726991493,11.884096056427,11.8372367792605,15.1508458445501,14.8096428371883,11.39416329277,12.8771232671817,11.6765342367169,13.6584675428189,9.68588038066662,5.91802309684747,5.26319954731196,4.17145219052996,3.62357330653004,25.2347938276953,34.2672359223017,0.991256348951394,0.793351699990633,3.62590025909898,3.94802342162745,6.70110798874885,3.83198696784351,4.89231696458715,5.1360919050391,2.84717436926707,4.28217282282428,3.51869292320377,6.56556357735798,5.06906626509712,3.59527763461689,2.16138049874694,0.995706366271836,1.70701110857774,3.42745537829186,3.38123207019241,3.46207257337034,4.65485969202302,3.22624771495465,3.60448261608267,1.32849133181642,1.09899109488962,1.48076596706161,0.592905254174298,1.50160595144485,1.96558995113203,1.57403478669398,3.04290182082754,5.06472035480075,5.34714288740982,6.32931502391783,4.86405680325106,4.11842119782122,8.62609239164127,5.58211421502755,4.99260276983297,1.76805214562978,1.61457672169721,2.41221760681684,7.02062122633098,3.41084541186873,3.91115943460862,4.92260748748046,5.16318546234705,5.52770649557992,6.42717830392237,5.46374214001837,6.9359463406724,8.19419351700467,5.58091690301205,3.4411296090305,5.00786447411097,3.61622646453779,0,2.17562273527484,4.42587845717133,5.51873492609465,12.8440471990234,10.7834751664827,0,3.7870639080656,11.042787679569,15.2271110275689,13.3562506594335,4.06246956519338,6.01556420022464,10.7569081699756,8.09621403349789,9.9366991689846,12.6492088942888,12.2102100240287,7.38088443082997,4.80777129901589,7.98146100832523,14.0224604526655,2.65490276679926,3.39892890616974,3.93020624054176,3.58349651536206,5.61073596473468,7.68587869859819,3.87642439752332,6.90714086007261,5.34746067577082,3.16036757935816,4.21674434299995,3.09406629744561,41.8740715077159,6.48219938512717,5.17434735131018,9.00215547132688,17.0246624296583,10.8804978737263,12.6702745863633,7.30715877875038,12.9069439435041,17.1583977399694,3.08739757276947,3.95727007059552,12.1098320021929,8.86599996443891,5.37175548014114,4.92422699235184,3.78925087618806,10.198391610578,2.56306321196779,3.714963623338,4.62986318424279,1.69531611304222,1.91371918809435,0.457556346413045,1.18984900995699,0.979660166265606,1.65839968565309,4.77335309007557,2.21435195506795,5.69294507955176,7.45236851670429,7.94535524854981,9.17122767733946,9.44050424693745,8.34799902825893,4.18809507174447,2.33306951925227,1.24267862617385,78.3533184771025,2.24274819065968,3.47462829959905,9.52810822885833,9.29950729039664,13.5164900392623,18.7771581833206,22.5253585780034,22.0204623293993,31.8891039490328,33.9875407384281,1.89606672376907,5.0681303822541,5.03283690107653,2.46849563657811,3.40150721768215,3.3775830312815,2.76449533895928,3.39685912501528,3.33189284828887,1.752756553065,3.02478555410522,3.31356794515158,2.11666051608725,1.40252282617883,1.36038230169127,3.55177525398503,0.897138566094757,4.36500002546604,8.69353173144857,30.7799259739938,23.8097111547445,6.85978813053011,8.02515366456581,52.5219213633872,48.3341498332536,47.5503276154699,45.1973869563898,21.9226406326606,27.9495742034189,27.675922509504,24.3173449741079,30.3605414019417,27.4412965228465,3.00983307994112,10.3746467084268,11.6098851912811,11.1829089851415,13.4152424081909,12.501358574601,10.6678429344775,11.9500333198559,13.4786068028562,11.8767689528985,13.6878821940729,14.5242282867279,10.3005658216871,10.3720746895888,12.2911903565012,11.9073422820768,12.7472758539341,14.2752823143142,12.3625770240992,10.3039244094078,12.6861623382604,11.8908790126756,12.1602456873134,11.7730597472186,10.3520318456864,12.8614203995348,12.8049581010941,13.9426947062057,9.09887562767274,15.1508413347589,9.72807148618228,11.1310065084387,9.41231399290286,12.0850736125053,10.9956768259251,16.2376875659665,13.8019648982791,9.66919743217342,14.5379132372321,5.07360263974886,7.88350641109433 | |phase1_expression=5.12476310735341,0,0,0,0,0,0.233612640595526,2.1950964985068,0.422366166455,1.63845168425395,0.34243593645101,0.319088635981346,0.513602189793617,2.18551006047494,0.666219523631325,1.01237633694913,0,0.315462165358238,0.959801035240171,0,19.0496969938396,0,0,0.47997726838022,0.68822784320151,0,0,0,0,0.504060259519861,0,0.635030673459631,0,0,0,0,0,0,1.5626706890476,0.523523743973798,0,0,0.485510353031154,3.14742044938943,2.33166941804883,0.917733760808408,4.69434806608824,18.7501634487184,12.9614847813338,12.8323733389027,6.15940255151595,5.75010257459886,0.335565212115473,2.90144856804538,0.672187598284928,10.8048963135098,8.30946975822394,4.64104883049698,20.636279007679,24.8625760257855,20.9164363157039,6.09920157724438,4.4464739805557,1.3498495759221,1.97773272513395,0.7104801149461,3.59520132622086,8.06858441175265,10.2652716185393,9.99043943654511,7.99234853135252,29.4220513935918,27.8294361599033,12.0040983230655,10.2554653989513,13.7882817991503,16.5173821499083,17.7485399938411,16.4358990584181,19.2553980086083,22.8719109006024,16.6692278578163,11.4465029590566,16.3201156909187,15.279824777681,50.6761167014708,44.8470794517174,37.0934897192348,4.01348824665875,2.72057616384428,5.79728977403356,0.860423876981386,2.719885334831,0.539703191637817,0.649776417447669,3.13618820968135,3.5111105032938,0.340860645156116,0.259786004602869,0,4.92951969218382,0,0,0,0.865964164044856,0.253359865475099,0,2.2836775943812,3.6251303710604,5.78924342352817,4.3371331691534,6.39377504455497,5.07354093963329,5.72746034099966,6.82014501387088,3.39299796590124,37.0792451601561,7.66376591675532,1.76922110389975,8.8971767471075,1.98757366614354,2.90925151881133,0,10.2473278954042,8.3778682725382,2.04365644166873,0.479260498023681,0,0.254140454146129,14.6794826616726,18.7575247155637,17.7172636479139,23.292458905765,19.4343747571051,14.1295870300501,15.7374025175725,12.1188842981876,3.6078021476927,3.0326731012041,7.57590681191306,8.45782879257574,9.19608417733892,16.7457780718975,15.2211866014072,15.4442853073514,15.5017601544668,13.3993466120412,15.78090561508,4.095791865724,11.3463648100692,17.7710635405588,16.001288467213,20.019401944243,13.5818344943645,15.2278780941878,1.79130840136644,0,0.51469581422943,0.284163499395593,6.62802472113606,10.5536726991493,11.884096056427,11.8372367792605,15.1508458445501,14.8096428371883,11.39416329277,12.8771232671817,11.6765342367169,13.6584675428189,9.68588038066662,5.91802309684747,5.26319954731196,4.17145219052996,3.62357330653004,25.2347938276953,34.2672359223017,0.991256348951394,0.793351699990633,3.62590025909898,3.94802342162745,6.70110798874885,3.83198696784351,4.89231696458715,5.1360919050391,2.84717436926707,4.28217282282428,3.51869292320377,6.56556357735798,5.06906626509712,3.59527763461689,2.16138049874694,0.995706366271836,1.70701110857774,3.42745537829186,3.38123207019241,3.46207257337034,4.65485969202302,3.22624771495465,3.60448261608267,1.32849133181642,1.09899109488962,1.48076596706161,0.592905254174298,1.50160595144485,1.96558995113203,1.57403478669398,3.04290182082754,5.06472035480075,5.34714288740982,6.32931502391783,4.86405680325106,4.11842119782122,8.62609239164127,5.58211421502755,4.99260276983297,1.76805214562978,1.61457672169721,2.41221760681684,7.02062122633098,3.41084541186873,3.91115943460862,4.92260748748046,5.16318546234705,5.52770649557992,6.42717830392237,5.46374214001837,6.9359463406724,8.19419351700467,5.58091690301205,3.4411296090305,5.00786447411097,3.61622646453779,0,2.17562273527484,4.42587845717133,5.51873492609465,12.8440471990234,10.7834751664827,0,3.7870639080656,11.042787679569,15.2271110275689,13.3562506594335,4.06246956519338,6.01556420022464,10.7569081699756,8.09621403349789,9.9366991689846,12.6492088942888,12.2102100240287,7.38088443082997,4.80777129901589,7.98146100832523,14.0224604526655,2.65490276679926,3.39892890616974,3.93020624054176,3.58349651536206,5.61073596473468,7.68587869859819,3.87642439752332,6.90714086007261,5.34746067577082,3.16036757935816,4.21674434299995,3.09406629744561,41.8740715077159,6.48219938512717,5.17434735131018,9.00215547132688,17.0246624296583,10.8804978737263,12.6702745863633,7.30715877875038,12.9069439435041,17.1583977399694,3.08739757276947,3.95727007059552,12.1098320021929,8.86599996443891,5.37175548014114,4.92422699235184,3.78925087618806,10.198391610578,2.56306321196779,3.714963623338,4.62986318424279,1.69531611304222,1.91371918809435,0.457556346413045,1.18984900995699,0.979660166265606,1.65839968565309,4.77335309007557,2.21435195506795,5.69294507955176,7.45236851670429,7.94535524854981,9.17122767733946,9.44050424693745,8.34799902825893,4.18809507174447,2.33306951925227,1.24267862617385,78.3533184771025,2.24274819065968,3.47462829959905,9.52810822885833,9.29950729039664,13.5164900392623,18.7771581833206,22.5253585780034,22.0204623293993,31.8891039490328,33.9875407384281,1.89606672376907,5.0681303822541,5.03283690107653,2.46849563657811,3.40150721768215,3.3775830312815,2.76449533895928,3.39685912501528,3.33189284828887,1.752756553065,3.02478555410522,3.31356794515158,2.11666051608725,1.40252282617883,1.36038230169127,3.55177525398503,0.897138566094757,4.36500002546604,8.69353173144857,30.7799259739938,23.8097111547445,6.85978813053011,8.02515366456581,52.5219213633872,48.3341498332536,47.5503276154699,45.1973869563898,21.9226406326606,27.9495742034189,27.675922509504,24.3173449741079,30.3605414019417,27.4412965228465,3.00983307994112,10.3746467084268,11.6098851912811,11.1829089851415,13.4152424081909,12.501358574601,10.6678429344775,11.9500333198559,13.4786068028562,11.8767689528985,13.6878821940729,14.5242282867279,10.3005658216871,10.3720746895888,12.2911903565012,11.9073422820768,12.7472758539341,14.2752823143142,12.3625770240992,10.3039244094078,12.6861623382604,11.8908790126756,12.1602456873134,11.7730597472186,10.3520318456864,12.8614203995348,12.8049581010941,13.9426947062057,9.09887562767274,15.1508413347589,9.72807148618228,11.1310065084387,9.41231399290286,12.0850736125053,10.9956768259251,16.2376875659665,13.8019648982791,9.66919743217342,14.5379132372321,5.07360263974886,7.88350641109433 | ||
|short_description=p1@Jazf1 | |||
}} | }} |
Latest revision as of 13:28, 1 October 2015
Short description: | p1@Jazf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Jazf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:733 |
Association with transcript: | 0bp_to_ENSMUST00000074541, NM_173406, uc009bzb.2_5end |
EntrezGene: | Jazf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.55e-10 | 33 |
neuronal stem cell | 3.55e-10 | 33 |
neuroblast | 3.55e-10 | 33 |
electrically signaling cell | 3.55e-10 | 33 |
CNS neuron (sensu Vertebrata) | 4.62e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.62e-10 | 23 |
neural cell | 2.32e-09 | 43 |
ectodermal cell | 3.69e-09 | 44 |
neurectodermal cell | 3.69e-09 | 44 |
electrically responsive cell | 3.63e-08 | 39 |
electrically active cell | 3.63e-08 | 39 |