FFCP PHASE1:Mm9::chr7:20282943..20282956,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:20282943..20282956,-
|short_description=p@chr7:20282943..20282956,-
|description=CAGE_peak_at_chr7:20282943..20282956,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=200 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:20282943..20282956,- | |||
|description=CAGE_peak_at_chr7:20282943..20282956,- | |||
|id=chr7:20282943..20282956,- | |||
|ontology_enrichment_celltype=CL:0000221!2.28e-07!44;CL:0000133!2.28e-07!44;CL:0000055!2.56e-07!50;CL:0002319!3.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.04e-07,43;CL:0002321,1.53e-07,70;CL:0000221,1.94e-07,44;CL:0000133,1.94e-07,44;CL:0002453,5.62e-07,8;CL:0002092,7.37e-07,3;CL:0002540,7.37e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.98e-12!114;UBERON:0002107!2.87e-11!22;UBERON:0007499!2.87e-11!22;UBERON:0006925!2.87e-11!22;UBERON:0009497!2.87e-11!22;UBERON:0000015!2.87e-11!22;UBERON:0002423!2.87e-11!22;UBERON:0006235!2.87e-11!22;UBERON:0008835!2.87e-11!22;UBERON:0003894!2.87e-11!22;UBERON:0004161!2.87e-11!22;UBERON:0008836!2.87e-11!22;UBERON:0004111!4.82e-11!122;UBERON:0002365!7.78e-11!25;UBERON:0002330!7.78e-11!25;UBERON:0001017!9.81e-11!73;UBERON:0005743!9.81e-11!73;UBERON:0004121!1.65e-10!102;UBERON:0000924!1.65e-10!102;UBERON:0006601!1.65e-10!102;UBERON:0000073!1.82e-10!75;UBERON:0001016!1.82e-10!75;UBERON:0009854!2.74e-10!23;UBERON:0009856!2.74e-10!23;UBERON:0005256!9.72e-08!47;UBERON:0003914!2.20e-07!47;UBERON:0000477!4.82e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.49e-18,22;UBERON:0007499,3.49e-18,22;UBERON:0006925,3.49e-18,22;UBERON:0009497,3.49e-18,22;UBERON:0000015,3.49e-18,22;UBERON:0002423,3.49e-18,22;UBERON:0006235,3.49e-18,22;UBERON:0008835,3.49e-18,22;UBERON:0003894,3.49e-18,22;UBERON:0004161,3.49e-18,22;UBERON:0008836,3.49e-18,22;UBERON:0009854,3.45e-17,23;UBERON:0009856,3.45e-17,23;UBERON:0002365,1.93e-15,25;UBERON:0002330,1.93e-15,25;UBERON:0000025,1.04e-13,114;UBERON:0004111,3.84e-12,122;UBERON:0001017,1.33e-10,73;UBERON:0001016,3.96e-10,75;UBERON:0000073,2.14e-09,54;UBERON:0002021,1.30e-08,10;UBERON:0000411,1.30e-08,10;UBERON:0001950,1.30e-08,10;UBERON:0005256,1.34e-08,45;UBERON:0002020,3.37e-08,34;UBERON:0003914,4.94e-08,47;UBERON:0001049,6.68e-08,52;UBERON:0005068,6.68e-08,52;UBERON:0006241,6.68e-08,52;UBERON:0007135,6.68e-08,52;UBERON:0011216,2.51e-07,194;UBERON:0004121,3.54e-07,95;UBERON:0000924,3.54e-07,95;UBERON:0006601,3.54e-07,95 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0,0,0.425216450755349,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,1.52617609466313,0.878744730937887,4.6663175777828,0.979904951377538,1.43752564364972,0.335565212115473,0,0,0.257259436035947,1.71920063963254,2.57836046138721,0.202316460859598,0,0,0,0,58.4934816232909,76.142709917657,61.8117700003107,18.8748069626595,34.1954291736184,0,0.135005938331691,0,5.42736870367227,3.53389665522582,0,0.0958454710182364,0,3.30347642998166,2.42605942361857,1.53606533256243,0,0.0914876436024097,0,2.79182999001381,5.06486349028512,5.95913166329559,2.06240009831567,4.41352210477219,0.186399445825301,0.075726193333184,0.0755715601067855,0.869593466105033,29.2544118173671,14.2793980078628,60.4467574634355,50.0327841434705,34.0500434193975,2.80888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,5.02409070763864,0,0.742210695324124,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0.494389935468748,0.86759614151947,0.884610551949874,0,0,0,0,0,0.628340120440365,0,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.695297280769106,0.255715457330331,1.0389402227978,0.162241263067758,0.203678727700633,0.248813941220186,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0.268412837520744,0.841159794256509,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.156998727841375,0,9.19003143970162,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0,2.5462585178142,3.16465751195892,6.48540907100142,11.2570179407113,166.771119571731,7.81495990103857,12.4815069245824,9.85057623993736,8.07288360848605,17.3679667690812,0,0,0.162964976442026,0,0,0.167506257441816,0.476087281772027,1.17080188714679,0,0,0.159454768657487,0.163863314715738,0,0.723245292907558,7.53956419696361,0,0.491764273019036,0.551873492609465,0.481651769963376,0.820481806145422,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0.955875191810208,1.78238939265915,0.283076530788832,1.61924280669958,0.876767573733936,0.790575555893047,0,0,0.35613120733451,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0,0,0,0,0.18006109403131,0,0,0,0,0,1.2178597964584,0,0,0,1.15420377059036,0,0.361877549568935,0.477489376012546,0.492422699235184,0.291480836629851,1.48340241608408,0,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.15241361331,0,0.292373642219257,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0,0,0,1.6942555278512,0.460325236507177,4.01026859407578,2.23409137046794,4.7955776383945,3.7769694869485,2.02506750069542,0.45032120322422,1.35942722695261,2.07104124700728,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,1.39912375625629,0.157731082679119,0,0,0.425216450755349,0,0,0.47997726838022,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,1.52617609466313,0.878744730937887,4.6663175777828,0.979904951377538,1.43752564364972,0.335565212115473,0,0,0.257259436035947,1.71920063963254,2.57836046138721,0.202316460859598,0,0,0,0,58.4934816232909,76.142709917657,61.8117700003107,18.8748069626595,34.1954291736184,0,0.135005938331691,0,5.42736870367227,3.53389665522582,0,0.0958454710182364,0,3.30347642998166,2.42605942361857,1.53606533256243,0,0.0914876436024097,0,2.79182999001381,5.06486349028512,5.95913166329559,2.06240009831567,4.41352210477219,0.186399445825301,0.075726193333184,0.0755715601067855,0.869593466105033,29.2544118173671,14.2793980078628,60.4467574634355,50.0327841434705,34.0500434193975,2.80888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,5.02409070763864,0,0.742210695324124,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.23517741427141,0.125666591329675,0.494389935468748,0.86759614151947,0.884610551949874,0,0,0,0,0,0.628340120440365,0,0.11981512450592,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.695297280769106,0.255715457330331,1.0389402227978,0.162241263067758,0.203678727700633,0.248813941220186,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0.257347907114715,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0.219550115291051,0.268412837520744,0.841159794256509,0.205809224758569,0,0,0,0.232236671860439,0,0,0,0.380451252225118,0.474529061544512,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0.432276099749388,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.156998727841375,0,9.19003143970162,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0,2.5462585178142,3.16465751195892,6.48540907100142,11.2570179407113,166.771119571731,7.81495990103857,12.4815069245824,9.85057623993736,8.07288360848605,17.3679667690812,0,0,0.162964976442026,0,0,0.167506257441816,0.476087281772027,1.17080188714679,0,0,0.159454768657487,0.163863314715738,0,0.723245292907558,7.53956419696361,0,0.491764273019036,0.551873492609465,0.481651769963376,0.820481806145422,0,0,0.631016438832513,0.390438744296638,0.861693590931196,0.955875191810208,1.78238939265915,0.283076530788832,1.61924280669958,0.876767573733936,0.790575555893047,0,0,0.35613120733451,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0.363533729477506,1.06949213515416,0,0,0,0,0.18006109403131,0,0,0,0,0,1.2178597964584,0,0,0,1.15420377059036,0,0.361877549568935,0.477489376012546,0.492422699235184,0.291480836629851,1.48340241608408,0,0,0,0.188368457004691,0.27338845544205,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.360586348559907,0.147689527174577,0.100966449948148,0.15241361331,0,0.292373642219257,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0.375364950902364,0,0,0,1.6942555278512,0.460325236507177,4.01026859407578,2.23409137046794,4.7955776383945,3.7769694869485,2.02506750069542,0.45032120322422,1.35942722695261,2.07104124700728,0,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0,0,0,0.192906610981141,0.249810577937946,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr7:20282943..20282956,- | |||
}} | }} |
Latest revision as of 18:29, 4 August 2015
Short description: | p@chr7:20282943..20282956, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:20282943..20282956, - |
Coexpression cluster: | MCL_coexpression_mm9:200 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.04e-07 | 43 |
embryonic cell | 1.53e-07 | 70 |
ectodermal cell | 1.94e-07 | 44 |
neurectodermal cell | 1.94e-07 | 44 |
oligodendrocyte precursor cell | 5.62e-07 | 8 |
bone marrow cell | 7.37e-07 | 3 |
mesenchymal stem cell of the bone marrow | 7.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.49e-18 | 22 |
epithelial sac | 3.49e-18 | 22 |
digestive gland | 3.49e-18 | 22 |
epithelium of foregut-midgut junction | 3.49e-18 | 22 |
anatomical boundary | 3.49e-18 | 22 |
hepatobiliary system | 3.49e-18 | 22 |
foregut-midgut junction | 3.49e-18 | 22 |
hepatic diverticulum | 3.49e-18 | 22 |
liver primordium | 3.49e-18 | 22 |
septum transversum | 3.49e-18 | 22 |
liver bud | 3.49e-18 | 22 |
digestive tract diverticulum | 3.45e-17 | 23 |
sac | 3.45e-17 | 23 |
exocrine gland | 1.93e-15 | 25 |
exocrine system | 1.93e-15 | 25 |
tube | 1.04e-13 | 114 |
anatomical conduit | 3.84e-12 | 122 |
central nervous system | 1.33e-10 | 73 |
nervous system | 3.96e-10 | 75 |
regional part of nervous system | 2.14e-09 | 54 |
occipital lobe | 1.30e-08 | 10 |
visual cortex | 1.30e-08 | 10 |
neocortex | 1.30e-08 | 10 |
trunk mesenchyme | 1.34e-08 | 45 |
gray matter | 3.37e-08 | 34 |
epithelial tube | 4.94e-08 | 47 |
neural tube | 6.68e-08 | 52 |
neural rod | 6.68e-08 | 52 |
future spinal cord | 6.68e-08 | 52 |
neural keel | 6.68e-08 | 52 |
organ system subdivision | 2.51e-07 | 194 |
ectoderm-derived structure | 3.54e-07 | 95 |
ectoderm | 3.54e-07 | 95 |
presumptive ectoderm | 3.54e-07 | 95 |