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FFCP PHASE1:Mm9::chr7:52960700..52960719,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:52960700..52960719,+
|DHSsupport=NA
|short_description=p2@Dbp
|DPIdataset=NA
|description=CAGE_peak_2_at_Dbp_5end
|association_with_transcript=83bp_to_NM_016974,uc009gws.2_5end
|EntrezGene=13170
|EntrezGene=13170
|HGNC=
|HGNC=
|MCL_coexpression_id=3628
|TSSclassifier=NA
|UniProt=Q3USN7,Q60925
|UniProt=Q3USN7,Q60925
|association_with_transcript=83bp_to_NM_016974,uc009gws.2_5end
|cluster_id=chr7:52960700..52960719,+
|description=CAGE_peak_2_at_Dbp_5end
|id=chr7:52960700..52960719,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000333,8.39e-07,10;CL:0000095,8.39e-07,10;CL:0000243,8.39e-07,10;CL:0000123,8.39e-07,10;CL:0000125,8.39e-07,10;CL:0000030,8.39e-07,10;CL:0000339,8.39e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.40e-10!63;UBERON:0004121!1.33e-09!102;UBERON:0000924!1.33e-09!102;UBERON:0006601!1.33e-09!102;UBERON:0000955!4.29e-09!50;UBERON:0006238!4.29e-09!50;UBERON:0002616!1.02e-08!49;UBERON:0007023!1.18e-08!51;UBERON:0004111!1.63e-08!122;UBERON:0000073!4.36e-08!75;UBERON:0001016!4.36e-08!75;UBERON:0001049!1.23e-07!52;UBERON:0005068!1.23e-07!52;UBERON:0006241!1.23e-07!52;UBERON:0007135!1.23e-07!52;UBERON:0001017!1.26e-07!73;UBERON:0005743!1.26e-07!73;UBERON:0002021!1.37e-07!10;UBERON:0000411!1.37e-07!10;UBERON:0001950!1.37e-07!10;UBERON:0002346!4.15e-07!71;UBERON:0003075!4.15e-07!71;UBERON:0007284!4.15e-07!71;UBERON:0000025!8.55e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.28e-13,54;UBERON:0004121,7.78e-13,95;UBERON:0000924,7.78e-13,95;UBERON:0006601,7.78e-13,95;UBERON:0001016,9.40e-13,75;UBERON:0007023,1.93e-12,51;UBERON:0000955,2.35e-12,47;UBERON:0006238,2.35e-12,47;UBERON:0001017,5.55e-12,73;UBERON:0002616,9.33e-12,46;UBERON:0002021,1.39e-11,10;UBERON:0000411,1.39e-11,10;UBERON:0001950,1.39e-11,10;UBERON:0001049,2.87e-11,52;UBERON:0005068,2.87e-11,52;UBERON:0006241,2.87e-11,52;UBERON:0007135,2.87e-11,52;UBERON:0004111,1.03e-10,122;UBERON:0002619,1.49e-09,17;UBERON:0003528,1.89e-09,29;UBERON:0002791,1.89e-09,29;UBERON:0001893,1.89e-09,29;UBERON:0003080,2.50e-09,40;UBERON:0002346,5.96e-09,64;UBERON:0003075,5.96e-09,64;UBERON:0007284,5.96e-09,64;UBERON:0010371,8.96e-09,73;UBERON:0002780,1.06e-08,39;UBERON:0001890,1.06e-08,39;UBERON:0006240,1.06e-08,39;UBERON:0000025,2.24e-08,114;UBERON:0000956,2.59e-08,21;UBERON:0001869,2.59e-08,21;UBERON:0000203,2.59e-08,21;UBERON:0002020,4.25e-08,34;UBERON:0010314,6.38e-08,92;UBERON:0003056,7.15e-08,49
|phase1_expression=0.960893082628764,0.348975407639361,1.81999695755814,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0.473193248037357,0.274228867211478,0,3.82694805679814,0.297872853602656,0,0.319984845586813,0.22940928106717,1.72269589234506,0.430761996159075,0,0.950117097281869,1.51218077855958,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,4.65818226509636,3.54819259268301,0.183546752161682,0,3.48840250208714,3.29529274101708,5.8328969722285,1.39986421625363,4.31257693094915,0,0,0,0.771778308107841,0.85960031981627,0,0,0,0,0.338844532069132,0.889294796111139,3.1496490104849,0,2.1314403448383,13.1824048628098,32.2743376470106,0,0,0,1.99955689082663,0.883474163806454,0,0,0,9.91042928994498,9.95961237064464,11.981309593987,0.131886287730194,0.274462930807229,0,7.2587579740359,9.56696437053856,14.9742282821274,0.883885756421003,0.142371680799103,0,1.06016670666458,1.28471652181535,4.63783181922684,0.860423876981386,5.439770669662,1.61910957491345,0,12.9927797258227,12.6399978118577,1.53387290320252,1.03914401841148,0,1.97180787687353,1.28326477414318,0,0,0,0,0,5.25245846707676,0,10.5393918736026,0,0.304465478312141,0,0.452167921657868,2.3517741427141,3.51866455723091,0,18.2195189719089,0,0.161766849947409,0.883366073841574,0.484875253135222,1.86391761218122,3.80615036115011,3.35114730901528,1.53274233125155,0.239630249011841,0.599902730993408,0,4.49371918214468,15.5550204958333,0.125654352112864,7.82209440865244,5.37002460393694,3.32460871295296,2.92034273521964,0,0.497627882440372,1.76905930903572,1.47309299120532,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.562210347358373,6.72628763921441,0,0,0.175951124163949,0,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0.804820204198858,0.583826711835847,0.493679549740441,1.14917224855367,4.29664690593035,2.48539978623065,0.878200461164203,0.402619256281115,3.36463917702604,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.569128834118316,3.39503340353085,0,0.246794327843601,8.89357881261447,0,0,0,0,0,0,0,0.162135226775035,0,0,1.86070473834252,0.312037673114561,0.252578877947112,0,0.482443521363367,16.2582807346612,0.37898282354097,0,0,0,0.502518772325447,0.238043640886014,0.195133647857799,0.472905432318573,1.99318220683897,0.478364305972461,10.8149787712387,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0.491764273019036,2.20749397043786,2.88991061978026,1.75817529888305,0.163934945376675,2.7771801992481,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0,0,3.21321316421807,0.99358059645788,0.35613120733451,0,1.97964147567043,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0,0.258717367565509,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,1.522324745573,0,0.21183207086382,0,5.7710188529518,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,4.82105785227325,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0,0,0.279902904647316,0.276399947608848,2.86401185404534,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,0.523511883968059,0.259229946583586,4.34937519160848,0.56369293868419,0,0,0,0,0.168956125490778,0.58678619322877,0.651021924219751,1.15345278868282,0.241584120826006,0.576060012515731,0.316011120628178,0,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.487289403698762,0,0.116876902181569,14.0572837841431,0,0.0897138566094757,0,1.54551675225752,0,1.28206136987086,1.50057865355346,5.01572104035363,7.34177395402186,7.82552902062201,4.58316410751517,9.10821866421544,6.16574267793578,10.5755145634558,5.40018000185445,18.0128481289688,16.3131267234314,18.6393712230655,0.207574695168353,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.512201219238954,0.17230640686684,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0.619747364743864,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,1.76473135295612,1.15933917810211
|phase1_expression=0.960893082628764,0.348975407639361,1.81999695755814,0,0.500895729946347,0.16787927191189,0,0.129123323441576,0,0.234064526321993,0,0,0,0.174840804837995,0,0,0,0.473193248037357,0.274228867211478,0,3.82694805679814,0.297872853602656,0,0.319984845586813,0.22940928106717,1.72269589234506,0.430761996159075,0,0.950117097281869,1.51218077855958,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,0,0,0,0,0,0,4.65818226509636,3.54819259268301,0.183546752161682,0,3.48840250208714,3.29529274101708,5.8328969722285,1.39986421625363,4.31257693094915,0,0,0,0.771778308107841,0.85960031981627,0,0,0,0,0.338844532069132,0.889294796111139,3.1496490104849,0,2.1314403448383,13.1824048628098,32.2743376470106,0,0,0,1.99955689082663,0.883474163806454,0,0,0,9.91042928994498,9.95961237064464,11.981309593987,0.131886287730194,0.274462930807229,0,7.2587579740359,9.56696437053856,14.9742282821274,0.883885756421003,0.142371680799103,0,1.06016670666458,1.28471652181535,4.63783181922684,0.860423876981386,5.439770669662,1.61910957491345,0,12.9927797258227,12.6399978118577,1.53387290320252,1.03914401841148,0,1.97180787687353,1.28326477414318,0,0,0,0,0,5.25245846707676,0,10.5393918736026,0,0.304465478312141,0,0.452167921657868,2.3517741427141,3.51866455723091,0,18.2195189719089,0,0.161766849947409,0.883366073841574,0.484875253135222,1.86391761218122,3.80615036115011,3.35114730901528,1.53274233125155,0.239630249011841,0.599902730993408,0,4.49371918214468,15.5550204958333,0.125654352112864,7.82209440865244,5.37002460393694,3.32460871295296,2.92034273521964,0,0.497627882440372,1.76905930903572,1.47309299120532,0.260240885925407,0,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.562210347358373,6.72628763921441,0,0,0.175951124163949,0,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0.154267112887378,0.232533944750408,0.804820204198858,0.583826711835847,0.493679549740441,1.14917224855367,4.29664690593035,2.48539978623065,0.878200461164203,0.402619256281115,3.36463917702604,0.617427674275707,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.569128834118316,3.39503340353085,0,0.246794327843601,8.89357881261447,0,0,0,0,0,0,0,0.162135226775035,0,0,1.86070473834252,0.312037673114561,0.252578877947112,0,0.482443521363367,16.2582807346612,0.37898282354097,0,0,0,0.502518772325447,0.238043640886014,0.195133647857799,0.472905432318573,1.99318220683897,0.478364305972461,10.8149787712387,0.172684981865896,0.289298117163023,3.01582567878545,1.08781136763742,0.491764273019036,2.20749397043786,2.88991061978026,1.75817529888305,0.163934945376675,2.7771801992481,0.315508219416257,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0,0,3.21321316421807,0.99358059645788,0.35613120733451,0,1.97964147567043,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,1.03135543248187,1.36175842301515,0,0.258717367565509,0.214337035031592,0.709360934569094,0.178368817602071,0.329098041204242,1.522324745573,0,0.21183207086382,0,5.7710188529518,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,0,4.82105785227325,0.170870880797853,0,0,0.188368457004691,0.27338845544205,0,0,0.279902904647316,0.276399947608848,2.86401185404534,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,0.523511883968059,0.259229946583586,4.34937519160848,0.56369293868419,0,0,0,0,0.168956125490778,0.58678619322877,0.651021924219751,1.15345278868282,0.241584120826006,0.576060012515731,0.316011120628178,0,0.308132871494482,0,0,0,0.120195449519969,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.487289403698762,0,0.116876902181569,14.0572837841431,0,0.0897138566094757,0,1.54551675225752,0,1.28206136987086,1.50057865355346,5.01572104035363,7.34177395402186,7.82552902062201,4.58316410751517,9.10821866421544,6.16574267793578,10.5755145634558,5.40018000185445,18.0128481289688,16.3131267234314,18.6393712230655,0.207574695168353,0,0.170733605754134,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.512201219238954,0.17230640686684,0.952587382566147,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0,0.188218760830661,0.338458431566706,0.182927972872773,0.526139422875686,0,1.12228454331548,0.118635018124174,0.0985044823755635,0.409231043169689,0.619747364743864,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,1.76473135295612,1.15933917810211
|short_description=p2@Dbp
}}
}}

Latest revision as of 21:41, 26 September 2015

Short description:p2@Dbp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dbp_5end
Coexpression cluster:MCL_coexpression_mm9:3628
Association with transcript: 83bp_to_NM_016974, uc009gws.2_5end
EntrezGene:Dbp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Dbp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.66
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C813.18
Mouse Microglia, donor2.CNhs12634.11736-123E832.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D710.54
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.52
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H118.22
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G14.30
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B116.26
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A410.81
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B414.06
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.28e-1354
ectoderm-derived structure7.78e-1395
ectoderm7.78e-1395
presumptive ectoderm7.78e-1395
nervous system9.40e-1375
adult organism1.93e-1251
brain2.35e-1247
future brain2.35e-1247
central nervous system5.55e-1273
regional part of brain9.33e-1246
occipital lobe1.39e-1110
visual cortex1.39e-1110
neocortex1.39e-1110
neural tube2.87e-1152
neural rod2.87e-1152
future spinal cord2.87e-1152
neural keel2.87e-1152
anatomical conduit1.03e-10122
regional part of cerebral cortex1.49e-0917
brain grey matter1.89e-0929
regional part of telencephalon1.89e-0929
telencephalon1.89e-0929
anterior neural tube2.50e-0940
neurectoderm5.96e-0964
neural plate5.96e-0964
presumptive neural plate5.96e-0964
ecto-epithelium8.96e-0973
regional part of forebrain1.06e-0839
forebrain1.06e-0839
future forebrain1.06e-0839
tube2.24e-08114
cerebral cortex2.59e-0821
cerebral hemisphere2.59e-0821
pallium2.59e-0821
gray matter4.25e-0834
structure with developmental contribution from neural crest6.38e-0892
pre-chordal neural plate7.15e-0849
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