FFCP PHASE1:Hg19::chr10:92672040..92672054,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:92672040..92672054,- to FFCP PHASE1:Hg19::chr10:92672040..92672054,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:92672040..92672054,- | |||
|coexpression_cluster_id=C1323 | |||
|description=CAGE_peak_at_chr10:92672040..92672054,- | |||
|id=chr10:92672040..92672054,- | |||
|ontology_enrichment_celltype=CL:0000222!1.58e-29!119;CL:0000213!4.27e-18!57;CL:0000215!4.27e-18!57;CL:0000220!2.08e-17!246;CL:0002321!2.96e-17!248;CL:0000055!7.64e-16!180;CL:0002139!1.58e-13!24;CL:0002078!2.57e-12!44;CL:0000066!8.73e-12!254;CL:0000115!9.09e-12!35;CL:0000680!3.10e-11!57;CL:0000056!3.10e-11!57;CL:0000355!3.10e-11!57;CL:0000183!5.44e-11!59;CL:0000187!7.28e-10!54;CL:0000071!7.77e-10!18;CL:0002546!7.77e-10!18;CL:0000393!5.83e-09!60;CL:0000211!5.83e-09!60;CL:0000077!5.38e-08!19;CL:0000076!7.59e-08!62;CL:0000359!1.33e-07!32;CL:0000057!7.11e-07!75;CL:0000192!9.14e-07!42;CL:0000514!9.14e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.59e-15;24!CL:0000115;3.27e-12;36!CL:0000213;4.57e-12;58!CL:0000215;4.57e-12;58!CL:0000071;7.96e-11;18!CL:0002078;4.61e-09;45!CL:0000077;8.49e-09;19!CL:0000359;1.82e-07;32!CL:1000413;5.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.55e-32,121;CL:0000213,3.76e-21,58;CL:0000215,3.76e-21,58;CL:0002321,5.13e-16,250;CL:0002139,4.96e-15,24;CL:0000115,2.40e-14,36;CL:0002078,4.33e-14,45;CL:0000680,1.75e-11,58;CL:0000056,1.75e-11,58;CL:0000355,1.75e-11,58;CL:0000066,1.89e-11,253;CL:0000071,7.10e-11,18;CL:0002546,7.10e-11,18;CL:0000187,5.37e-10,55;CL:0000076,6.06e-09,63;CL:0000077,8.35e-09,19;CL:0000393,9.75e-09,61;CL:0000211,9.75e-09,61;CL:0000359,7.46e-08,32;CL:1000413,5.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;7.96e-11;18!CL:0000222;2.90e-09;121!CL:0000355;7.88e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.19e-27!118;UBERON:0002049!5.25e-23!79;UBERON:0007798!5.25e-23!79;UBERON:0000490!1.02e-22!138;UBERON:0000055!8.63e-22!69;UBERON:0004872!6.63e-21!84;UBERON:0001009!4.38e-19!113;UBERON:0001981!6.18e-19!60;UBERON:0007500!6.18e-19!60;UBERON:0004537!6.18e-19!60;UBERON:0006965!6.18e-19!60;UBERON:0005256!6.15e-18!143;UBERON:0004535!1.32e-17!110;UBERON:0003104!5.92e-17!238;UBERON:0009142!5.92e-17!238;UBERON:0002100!2.20e-16!216;UBERON:0000119!5.73e-15!312;UBERON:0000483!1.41e-14!309;UBERON:0000468!4.15e-13!659;UBERON:0001134!5.09e-13!61;UBERON:0002036!5.09e-13!61;UBERON:0003082!5.09e-13!61;UBERON:0004290!1.10e-12!70;UBERON:0002385!4.20e-12!63;UBERON:0001015!4.20e-12!63;UBERON:0000383!4.20e-12!63;UBERON:0000926!6.65e-12!448;UBERON:0004120!6.65e-12!448;UBERON:0006603!6.65e-12!448;UBERON:0000481!1.95e-11!347;UBERON:0001637!3.36e-11!42;UBERON:0003509!3.36e-11!42;UBERON:0004572!3.36e-11!42;UBERON:0000486!5.66e-11!82;UBERON:0000914!7.65e-11!83;UBERON:0002329!7.65e-11!83;UBERON:0003077!7.65e-11!83;UBERON:0003059!7.65e-11!83;UBERON:0007282!7.65e-11!83;UBERON:0009618!7.65e-11!83;UBERON:0007285!7.65e-11!83;UBERON:0003103!1.31e-10!69;UBERON:0000477!1.43e-10!286;UBERON:0004111!4.03e-10!241;UBERON:0000487!4.40e-10!22;UBERON:0001986!7.77e-10!18;UBERON:0004638!7.77e-10!18;UBERON:0004852!7.77e-10!18;UBERON:0006914!1.44e-09!25;UBERON:0000467!1.92e-09!625;UBERON:0000480!3.06e-09!626;UBERON:0007100!4.84e-09!27;UBERON:0000475!9.46e-09!365;UBERON:0000025!1.33e-08!194;UBERON:0002417!1.00e-07!61;UBERON:0000916!1.00e-07!61;UBERON:0004573!1.18e-07!33;UBERON:0004571!1.18e-07!33;UBERON:0000948!1.92e-07!24;UBERON:0005498!1.92e-07!24;UBERON:0004140!1.92e-07!24;UBERON:0009881!1.92e-07!24;UBERON:0004141!1.92e-07!24;UBERON:0003084!1.92e-07!24;UBERON:0007005!1.92e-07!24;UBERON:0004139!1.92e-07!24;UBERON:0004291!1.92e-07!24;UBERON:0009569!3.63e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;2.56e-11;22!UBERON:0004638;7.96e-11;18!UBERON:0001986;7.96e-11;18!UBERON:0004852;7.96e-11;18!UBERON:0000055;1.08e-10;65!UBERON:0007500;1.80e-10;56!UBERON:0001981;1.80e-10;56!UBERON:0004537;1.80e-10;56!UBERON:0006914;2.31e-10;25!UBERON:0002049;2.81e-10;75!UBERON:0007798;2.81e-10;75!UBERON:0003914;4.09e-10;74!UBERON:0000490;1.53e-09;33!UBERON:0001637;1.74e-09;42!UBERON:0003509;1.74e-09;42!UBERON:0004572;1.74e-09;42!UBERON:0001134;6.41e-09;16!UBERON:0002036;6.41e-09;16!UBERON:0007100;7.61e-09;25!UBERON:0002385;2.68e-08;31!UBERON:0001015;2.68e-08;31!UBERON:0000383;2.68e-08;31!UBERON:0001009;1.19e-07;112!UBERON:0004573;3.20e-07;33!UBERON:0004571;3.20e-07;33!UBERON:0000948;4.37e-07;22!UBERON:0003915;5.10e-07;9!UBERON:0004700;5.10e-07;9!UBERON:0001917;5.10e-07;9 | |||
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| ||
|short_description=p@chr10:92672040..92672054,- | |||
}} | }} |
Latest revision as of 16:42, 23 July 2015
Short description: | p@chr10:92672040..92672054, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:92672040..92672054, - |
Coexpression cluster: | C1323_heart_Lymphatic_left_mesenchymal_skeletal_bone_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.55e-32 | 121 |
lining cell | 3.76e-21 | 58 |
barrier cell | 3.76e-21 | 58 |
embryonic cell | 5.13e-16 | 250 |
endothelial cell of vascular tree | 4.96e-15 | 24 |
endothelial cell | 2.40e-14 | 36 |
meso-epithelial cell | 4.33e-14 | 45 |
muscle precursor cell | 1.75e-11 | 58 |
myoblast | 1.75e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.75e-11 | 58 |
epithelial cell | 1.89e-11 | 253 |
blood vessel endothelial cell | 7.10e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.10e-11 | 18 |
muscle cell | 5.37e-10 | 55 |
squamous epithelial cell | 6.06e-09 | 63 |
mesothelial cell | 8.35e-09 | 19 |
electrically responsive cell | 9.75e-09 | 61 |
electrically active cell | 9.75e-09 | 61 |
vascular associated smooth muscle cell | 7.46e-08 | 32 |
endothelial cell of artery | 5.14e-07 | 9 |