FFCP PHASE1:Hg19::chr11:124939392..124939418,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:124939392..124939418,+ to FFCP PHASE1:Hg19::chr11:124939392..124939418,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:124939392..124939418,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr11:124939392..124939418,+ | |||
|id=chr11:124939392..124939418,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.15e-85!42;CL:0000860!3.67e-79!45;CL:0000839!4.58e-69!70;CL:0000557!5.12e-68!71;CL:0000766!3.48e-63!76;CL:0002194!6.15e-54!63;CL:0000576!6.15e-54!63;CL:0000040!6.15e-54!63;CL:0000559!6.15e-54!63;CL:0002009!3.98e-52!65;CL:0000763!6.45e-44!112;CL:0000049!6.45e-44!112;CL:0002031!1.94e-36!124;CL:0000738!1.45e-31!140;CL:0002032!8.80e-28!165;CL:0000837!8.80e-28!165;CL:0000037!2.18e-26!172;CL:0000566!2.18e-26!172;CL:0002087!4.98e-26!119;CL:0002274!9.32e-26!5;CL:0000457!9.32e-26!5;CL:0002191!9.32e-26!5;CL:0000097!9.32e-26!5;CL:0000831!9.32e-26!5;CL:0002028!9.32e-26!5;CL:0000988!1.40e-24!182;CL:0000163!3.12e-14!9;CL:0000134!4.38e-10!358;CL:0002320!9.28e-10!365;CL:0000219!1.31e-08!390;CL:0000048!3.10e-07!430;CL:0000723!4.87e-07!436;CL:0000034!8.70e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.87e-66;33!CL:0002057;1.87e-66;33!CL:0000473;2.48e-48;39!CL:0000234;2.48e-48;39!CL:0000576;1.24e-32;48!CL:0000766;1.58e-24;69!CL:0000097;1.85e-17;5!CL:0000163;5.89e-10;9!CL:0000763;1.11e-09;100!CL:0002087;6.65e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-55,42;CL:0002057,1.19e-55,42;CL:0000839,1.57e-48,66;CL:0000473,2.08e-48,48;CL:0000234,2.08e-48,48;CL:0000557,8.84e-48,67;CL:0000766,2.49e-44,72;CL:0002194,2.95e-38,59;CL:0000576,2.95e-38,59;CL:0000040,2.95e-38,59;CL:0000559,2.95e-38,59;CL:0002009,6.03e-37,61;CL:0000763,4.15e-32,108;CL:0000049,4.15e-32,108;CL:0002031,1.08e-25,120;CL:0000738,2.26e-22,136;CL:0002032,1.06e-20,161;CL:0000837,1.06e-20,161;CL:0000037,1.00e-19,168;CL:0002087,1.32e-18,115;CL:0000988,1.38e-18,177;CL:0000097,1.56e-17,5;CL:0002028,1.56e-17,5;CL:0000163,5.37e-10,9;CL:0000134,7.98e-08,354;CL:0002320,1.30e-07,361;CL:0000219,7.28e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.58e-44;42!UBERON:0005425;1.33e-10;1!CL:0000049;9.37e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.52e-60!80;UBERON:0001474!3.49e-55!86;UBERON:0002390!1.12e-48!102;UBERON:0003061!1.12e-48!102;UBERON:0004765!4.04e-46!101;UBERON:0001434!4.04e-46!101;UBERON:0002193!8.64e-44!112;UBERON:0002405!1.73e-42!115;UBERON:0002204!1.95e-25!167;UBERON:0003081!1.29e-19!216;UBERON:0002384!2.58e-09!375;UBERON:0000062!1.65e-07!511;UBERON:0000926!2.60e-07!448;UBERON:0004120!2.60e-07!448;UBERON:0006603!2.60e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.33e-10;1!UBERON:0001785;1.33e-10;1!UBERON:0002464;1.33e-10;1!UBERON:0004904;1.33e-10;1!UBERON:0001021;1.33e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.81e-42,76;UBERON:0001474,1.12e-38,82;UBERON:0004765,4.80e-35,90;UBERON:0002405,7.65e-34,93;UBERON:0002390,5.34e-32,98;UBERON:0003061,5.34e-32,98;UBERON:0001434,2.59e-31,100;UBERON:0002193,8.10e-29,108;UBERON:0002204,9.92e-18,167;UBERON:0003081,4.25e-14,203;UBERON:0000941,1.46e-10,1;UBERON:0001785,1.46e-10,1;UBERON:0002464,1.46e-10,1;UBERON:0004904,1.46e-10,1;UBERON:0001021,1.46e-10,1;UBERON:0003902,1.46e-10,1;UBERON:0005425,1.46e-10,1;UBERON:0000926,4.75e-08,315;UBERON:0004120,4.75e-08,315;UBERON:0006603,4.75e-08,315;UBERON:0002384,2.53e-07,371 | |||
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|short_description=p@chr11:124939392..124939418,+ | |||
}} | }} |
Latest revision as of 19:37, 23 July 2015
Short description: | p@chr11:124939392..124939418, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:124939392..124939418, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-55 | 42 |
myeloid lineage restricted progenitor cell | 1.57e-48 | 66 |
defensive cell | 2.08e-48 | 48 |
phagocyte | 2.08e-48 | 48 |
granulocyte monocyte progenitor cell | 8.84e-48 | 67 |
myeloid leukocyte | 2.49e-44 | 72 |
monopoietic cell | 2.95e-38 | 59 |
monocyte | 2.95e-38 | 59 |
monoblast | 2.95e-38 | 59 |
promonocyte | 2.95e-38 | 59 |
macrophage dendritic cell progenitor | 6.03e-37 | 61 |
myeloid cell | 4.15e-32 | 108 |
common myeloid progenitor | 4.15e-32 | 108 |
hematopoietic lineage restricted progenitor cell | 1.08e-25 | 120 |
leukocyte | 2.26e-22 | 136 |
hematopoietic oligopotent progenitor cell | 1.06e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-20 | 161 |
hematopoietic stem cell | 1.00e-19 | 168 |
nongranular leukocyte | 1.32e-18 | 115 |
hematopoietic cell | 1.38e-18 | 177 |
mast cell | 1.56e-17 | 5 |
basophil mast progenitor cell | 1.56e-17 | 5 |
endocrine cell | 5.37e-10 | 9 |
mesenchymal cell | 7.98e-08 | 354 |
connective tissue cell | 1.30e-07 | 361 |
motile cell | 7.28e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.81e-42 | 76 |
bone element | 1.12e-38 | 82 |
skeletal element | 4.80e-35 | 90 |
immune system | 7.65e-34 | 93 |
hematopoietic system | 5.34e-32 | 98 |
blood island | 5.34e-32 | 98 |
skeletal system | 2.59e-31 | 100 |
hemolymphoid system | 8.10e-29 | 108 |
musculoskeletal system | 9.92e-18 | 167 |
lateral plate mesoderm | 4.25e-14 | 203 |
cranial nerve II | 1.46e-10 | 1 |
cranial nerve | 1.46e-10 | 1 |
nerve trunk | 1.46e-10 | 1 |
nerve connecting eye with brain | 1.46e-10 | 1 |
nerve | 1.46e-10 | 1 |
retinal neural layer | 1.46e-10 | 1 |
presumptive neural retina | 1.46e-10 | 1 |
mesoderm | 4.75e-08 | 315 |
mesoderm-derived structure | 4.75e-08 | 315 |
presumptive mesoderm | 4.75e-08 | 315 |
connective tissue | 2.53e-07 | 371 |