FFCP PHASE1:Hg19::chr11:46403574..46403593,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:46403574..46403593,+ to FFCP PHASE1:Hg19::chr11:46403574..46403593,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4192 | |EntrezGene=4192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |HGNC=6972 | ||
|TSSclassifier=strong | |||
|UniProt=P21741 | |UniProt=P21741 | ||
|association_with_transcript=271bp_to_ENST00000407067,uc001ncs.2_5end | |||
|cluster_id=chr11:46403574..46403593,+ | |||
|description=CAGE_peak_5_at_MDK_5end | |||
|id=chr11:46403574..46403593,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.94e-23!248;CL:0000220!4.67e-22!246;CL:0000222!1.14e-20!119;CL:0000066!1.19e-17!254;CL:0000183!1.94e-13!59;CL:0000055!6.54e-13!180;CL:0000393!1.38e-12!60;CL:0000211!1.38e-12!60;CL:0002078!2.39e-11!44;CL:0000187!2.75e-11!54;CL:0000115!3.09e-11!35;CL:0002139!1.52e-10!24;CL:0000213!1.54e-10!57;CL:0000215!1.54e-10!57;CL:0000680!2.35e-10!57;CL:0000056!2.35e-10!57;CL:0000355!2.35e-10!57;CL:0000192!2.04e-09!42;CL:0000514!2.04e-09!42;CL:1000449!9.10e-08!16;CL:0000071!1.04e-07!18;CL:0002546!1.04e-07!18;CL:1000497!1.27e-07!18;CL:0002518!1.27e-07!18;CL:0000359!5.77e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.60e-11;24!CL:0000115;1.56e-10;36!CL:0002078;8.44e-09;45!CL:0000071;3.99e-08;18!CL:1000449;6.02e-08;15!CL:0000213;1.25e-07;58!CL:0000215;1.25e-07;58!CL:0000192;1.38e-07;43!CL:1000497;1.59e-07;17!CL:0002518;1.59e-07;17!CL:0000393;2.44e-07;61!CL:0000211;2.44e-07;61!CL:0000359;5.26e-07;32!CL:0000187;6.61e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.50e-23,250;CL:0000222,9.85e-23,121;CL:0000066,4.22e-17,253;CL:0000393,1.15e-13,61;CL:0000211,1.15e-13,61;CL:0000115,1.00e-12,36;CL:0002078,1.02e-12,45;CL:0000213,1.94e-12,58;CL:0000215,1.94e-12,58;CL:0000187,2.86e-12,55;CL:0002139,3.58e-11,24;CL:0000680,1.41e-10,58;CL:0000056,1.41e-10,58;CL:0000355,1.41e-10,58;CL:0000192,2.88e-10,43;CL:0000514,2.88e-10,43;CL:0000071,3.86e-08,18;CL:0002546,3.86e-08,18;CL:1000449,6.52e-08,15;CL:1000497,1.72e-07,17;CL:0002518,1.72e-07,17;CL:0000359,2.40e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;3.99e-08;18!CL:0000222;1.11e-07;121!CL:0000514;1.38e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.07e-18!118;UBERON:0000490!2.23e-18!138;UBERON:0000119!7.24e-18!312;UBERON:0000483!1.76e-17!309;UBERON:0002049!2.35e-17!79;UBERON:0007798!2.35e-17!79;UBERON:0005256!4.05e-15!143;UBERON:0000481!1.08e-13!347;UBERON:0000055!1.59e-13!69;UBERON:0000477!2.95e-12!286;UBERON:0004111!4.13e-12!241;UBERON:0004872!9.36e-12!84;UBERON:0001981!1.43e-11!60;UBERON:0007500!1.43e-11!60;UBERON:0004537!1.43e-11!60;UBERON:0006965!1.43e-11!60;UBERON:0004535!4.39e-11!110;UBERON:0000468!7.17e-11!659;UBERON:0003104!8.93e-11!238;UBERON:0009142!8.93e-11!238;UBERON:0001009!3.46e-10!113;UBERON:0002100!4.96e-10!216;UBERON:0000025!7.63e-10!194;UBERON:0002385!1.45e-09!63;UBERON:0001015!1.45e-09!63;UBERON:0000383!1.45e-09!63;UBERON:0001134!1.56e-09!61;UBERON:0002036!1.56e-09!61;UBERON:0003082!1.56e-09!61;UBERON:0000475!1.96e-09!365;UBERON:0000922!3.34e-09!612;UBERON:0000486!1.82e-08!82;UBERON:0001637!3.08e-08!42;UBERON:0003509!3.08e-08!42;UBERON:0004572!3.08e-08!42;UBERON:0000467!6.69e-08!625;UBERON:0000480!7.01e-08!626;UBERON:0006554!7.66e-08!44;UBERON:0004290!7.95e-08!70;UBERON:0000914!7.99e-08!83;UBERON:0002329!7.99e-08!83;UBERON:0003077!7.99e-08!83;UBERON:0003059!7.99e-08!83;UBERON:0007282!7.99e-08!83;UBERON:0009618!7.99e-08!83;UBERON:0007285!7.99e-08!83;UBERON:0004211!9.10e-08!16;UBERON:0001285!9.10e-08!16;UBERON:0007684!9.10e-08!16;UBERON:0003220!9.10e-08!16;UBERON:0004208!9.10e-08!16;UBERON:0001986!1.04e-07!18;UBERON:0004638!1.04e-07!18;UBERON:0004852!1.04e-07!18;UBERON:0007625!1.37e-07!11;UBERON:0001008!1.43e-07!45;UBERON:0006555!1.54e-07!17;UBERON:0005103!1.54e-07!17;UBERON:0000083!1.54e-07!17;UBERON:0009201!1.54e-07!17;UBERON:0004819!1.54e-07!17;UBERON:0006553!1.54e-07!17;UBERON:0003074!1.54e-07!17;UBERON:0003060!1.54e-07!17;UBERON:0000080!1.60e-07!18;UBERON:0002120!1.60e-07!18;UBERON:0004875!1.60e-07!18;UBERON:0005721!1.60e-07!18;UBERON:0005754!1.60e-07!18;UBERON:0007297!1.60e-07!18;UBERON:0002050!1.87e-07!605;UBERON:0005423!1.87e-07!605;UBERON:0000923!3.11e-07!604;UBERON:0005291!3.11e-07!604;UBERON:0006598!3.11e-07!604;UBERON:0002532!3.11e-07!604;UBERON:0006914!3.32e-07!25;UBERON:0001456!4.42e-07!21;UBERON:0004573!6.44e-07!33;UBERON:0004571!6.44e-07!33;UBERON:0000466!8.92e-07!126;UBERON:0005156!9.06e-07!59;UBERON:0000990!9.06e-07!59;UBERON:0000970!9.96e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.63e-09;74!UBERON:0002049;9.80e-09;75!UBERON:0007798;9.80e-09;75!UBERON:0004638;3.99e-08;18!UBERON:0001986;3.99e-08;18!UBERON:0004852;3.99e-08;18!UBERON:0000055;4.30e-08;65!UBERON:0007500;4.86e-08;56!UBERON:0001981;4.86e-08;56!UBERON:0004537;4.86e-08;56!UBERON:0007625;5.56e-08;11!UBERON:0006555;6.02e-08;15!UBERON:0004819;6.02e-08;15!UBERON:0001285;6.02e-08;15!UBERON:0007684;6.02e-08;15!UBERON:0006914;6.80e-08;25!UBERON:0001456;9.33e-08;21!UBERON:0000970;2.28e-07;20!UBERON:0000487;2.37e-07;22!UBERON:0000019;3.91e-07;19!UBERON:0000047;3.91e-07;19!UBERON:0004088;3.91e-07;19!UBERON:0010230;3.91e-07;19!UBERON:0000490;5.29e-07;33!UBERON:0001637;9.08e-07;42!UBERON:0003509;9.08e-07;42!UBERON:0004572;9.08e-07;42!UBERON:0004573;9.76e-07;33!UBERON:0004571;9.76e-07;33 | |||
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| ||
|short_description=p5@MDK | |||
}} | }} |
Latest revision as of 03:00, 18 September 2015
Short description: | p5@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 271bp_to_ENST00000407067, uc001ncs.2_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | P21741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.50e-23 | 250 |
mesodermal cell | 9.85e-23 | 121 |
epithelial cell | 4.22e-17 | 253 |
electrically responsive cell | 1.15e-13 | 61 |
electrically active cell | 1.15e-13 | 61 |
endothelial cell | 1.00e-12 | 36 |
meso-epithelial cell | 1.02e-12 | 45 |
lining cell | 1.94e-12 | 58 |
barrier cell | 1.94e-12 | 58 |
muscle cell | 2.86e-12 | 55 |
endothelial cell of vascular tree | 3.58e-11 | 24 |
muscle precursor cell | 1.41e-10 | 58 |
myoblast | 1.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-10 | 58 |
smooth muscle cell | 2.88e-10 | 43 |
smooth muscle myoblast | 2.88e-10 | 43 |
blood vessel endothelial cell | 3.86e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.86e-08 | 18 |
epithelial cell of nephron | 6.52e-08 | 15 |
kidney cell | 1.72e-07 | 17 |
kidney epithelial cell | 1.72e-07 | 17 |
vascular associated smooth muscle cell | 2.40e-07 | 32 |