FFCP PHASE1:Hg19::chr11:73019885..73019951,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:73019885..73019951,+ to FFCP PHASE1:Hg19::chr11:73019885..73019951,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9828 | |EntrezGene=9828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21726 | |HGNC=21726 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PE2 | |UniProt=Q96PE2 | ||
|association_with_transcript=216bp_to_AF378754_5end | |||
|cluster_id=chr11:73019885..73019951,+ | |||
|description=CAGE_peak_2_at_ARHGEF17_5end | |||
|id=chr11:73019885..73019951,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-32!180;CL:0000057!1.19e-20!75;CL:0000680!4.64e-13!57;CL:0000056!4.64e-13!57;CL:0000355!4.64e-13!57;CL:0000183!1.73e-12!59;CL:0000187!2.21e-12!54;CL:0000192!8.41e-10!42;CL:0000514!8.41e-10!42;CL:0000393!1.36e-09!60;CL:0000211!1.36e-09!60;CL:0000222!1.43e-09!119;CL:0002620!1.78e-08!23;CL:0000136!1.03e-07!15;CL:0000359!4.63e-07!32;CL:0002334!8.18e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000057;6.63e-09;73!CL:0002620;1.04e-08;23!CL:0000192;3.77e-08;43!CL:0000187;8.18e-08;55!CL:0002334;4.73e-07;12!CL:0000359;5.81e-07;32!CL:0000136;7.86e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.31e-22,76;CL:0000680,5.99e-14,58;CL:0000056,5.99e-14,58;CL:0000355,5.99e-14,58;CL:0000187,3.02e-13,55;CL:0000393,1.40e-10,61;CL:0000211,1.40e-10,61;CL:0000192,1.44e-10,43;CL:0000514,1.44e-10,43;CL:0000222,1.37e-09,121;CL:0002620,1.04e-08,23;CL:0000136,6.37e-08,15;CL:0000359,3.01e-07,32;CL:0002334,5.41e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.77e-08;43!CL:0000355;7.41e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.21e-21!365;UBERON:0000481!1.50e-16!347;UBERON:0000914!1.98e-15!83;UBERON:0002329!1.98e-15!83;UBERON:0003077!1.98e-15!83;UBERON:0003059!1.98e-15!83;UBERON:0007282!1.98e-15!83;UBERON:0009618!1.98e-15!83;UBERON:0007285!1.98e-15!83;UBERON:0000468!5.25e-15!659;UBERON:0004290!2.28e-14!70;UBERON:0002385!5.09e-14!63;UBERON:0001015!5.09e-14!63;UBERON:0000383!5.09e-14!63;UBERON:0001134!1.44e-13!61;UBERON:0002036!1.44e-13!61;UBERON:0003082!1.44e-13!61;UBERON:0002100!3.51e-13!216;UBERON:0005256!1.20e-12!143;UBERON:0000477!2.90e-12!286;UBERON:0000467!3.22e-12!625;UBERON:0000486!3.69e-12!82;UBERON:0000480!6.19e-12!626;UBERON:0000483!6.81e-12!309;UBERON:0000119!1.34e-11!312;UBERON:0004872!2.51e-11!84;UBERON:0003104!2.04e-10!238;UBERON:0009142!2.04e-10!238;UBERON:0004111!5.97e-10!241;UBERON:0003102!7.35e-10!95;UBERON:0007100!1.05e-08!27;UBERON:0002049!2.56e-08!79;UBERON:0007798!2.56e-08!79;UBERON:0003914!6.35e-08!118;UBERON:0004573!7.54e-08!33;UBERON:0004571!7.54e-08!33;UBERON:0002199!7.96e-08!45;UBERON:0002416!7.96e-08!45;UBERON:0001981!8.72e-08!60;UBERON:0007500!8.72e-08!60;UBERON:0004537!8.72e-08!60;UBERON:0006965!8.72e-08!60;UBERON:0000948!9.18e-08!24;UBERON:0005498!9.18e-08!24;UBERON:0004140!9.18e-08!24;UBERON:0009881!9.18e-08!24;UBERON:0004141!9.18e-08!24;UBERON:0003084!9.18e-08!24;UBERON:0007005!9.18e-08!24;UBERON:0004139!9.18e-08!24;UBERON:0004291!9.18e-08!24;UBERON:0002050!9.40e-08!605;UBERON:0005423!9.40e-08!605;UBERON:0000025!1.02e-07!194;UBERON:0001637!1.12e-07!42;UBERON:0003509!1.12e-07!42;UBERON:0004572!1.12e-07!42;UBERON:0000923!1.58e-07!604;UBERON:0005291!1.58e-07!604;UBERON:0006598!1.58e-07!604;UBERON:0002532!1.58e-07!604;UBERON:0001009!1.94e-07!113;UBERON:0000055!2.70e-07!69;UBERON:0000922!4.65e-07!612;UBERON:0000490!8.59e-07!138;UBERON:0004535!8.77e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.83e-09;25!UBERON:0000948;7.13e-08;22!UBERON:0004573;3.67e-07;33!UBERON:0004571;3.67e-07;33!UBERON:0002385;4.04e-07;31!UBERON:0001015;4.04e-07;31!UBERON:0000383;4.04e-07;31!UBERON:0002384;4.54e-07;198 | |||
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| ||
|short_description=p2@ARHGEF17 | |||
}} | }} |
Latest revision as of 02:51, 20 September 2015
Short description: | p2@ARHGEF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF17_5end |
Coexpression cluster: | NA |
Association with transcript: | 216bp_to_AF378754_5end |
EntrezGene: | ARHGEF17 |
HGNC: | 21726 |
UniProt: | Q96PE2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.31e-22 | 76 |
muscle precursor cell | 5.99e-14 | 58 |
myoblast | 5.99e-14 | 58 |
multi-potent skeletal muscle stem cell | 5.99e-14 | 58 |
muscle cell | 3.02e-13 | 55 |
electrically responsive cell | 1.40e-10 | 61 |
electrically active cell | 1.40e-10 | 61 |
smooth muscle cell | 1.44e-10 | 43 |
smooth muscle myoblast | 1.44e-10 | 43 |
mesodermal cell | 1.37e-09 | 121 |
skin fibroblast | 1.04e-08 | 23 |
fat cell | 6.37e-08 | 15 |
vascular associated smooth muscle cell | 3.01e-07 | 32 |
preadipocyte | 5.41e-07 | 12 |