FFCP PHASE1:Hg19::chr12:10281475..10281477,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:10281475..10281477,+ to FFCP PHASE1:Hg19::chr12:10281475..10281477,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:10281475..10281477,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr12:10281475..10281477,+ | |||
|id=chr12:10281475..10281477,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.10e-62!42;CL:0000860!4.87e-58!45;CL:0000766!2.75e-45!76;CL:0002194!9.74e-39!63;CL:0000576!9.74e-39!63;CL:0000040!9.74e-39!63;CL:0000559!9.74e-39!63;CL:0002009!2.36e-37!65;CL:0000839!3.11e-34!70;CL:0000557!1.16e-33!71;CL:0000738!1.73e-31!140;CL:0000763!2.59e-28!112;CL:0000049!2.59e-28!112;CL:0002087!1.15e-27!119;CL:0000037!5.29e-24!172;CL:0000566!5.29e-24!172;CL:0000988!3.35e-22!182;CL:0002031!4.40e-21!124;CL:0002032!7.49e-21!165;CL:0000837!7.49e-21!165;CL:0000767!1.68e-12!3;CL:0000094!3.01e-12!8;CL:0000842!1.53e-11!3;CL:0002393!7.06e-11!9;CL:0002397!7.06e-11!9;CL:0000081!8.13e-09!11;CL:0000224!8.97e-09!4;CL:0000134!4.79e-07!358;CL:0002320!9.42e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-38;33!CL:0002057;2.06e-38;33!CL:0000473;2.27e-24;39!CL:0000234;2.27e-24;39!CL:0000576;6.12e-21;48!CL:0000766;1.37e-12;69!CL:0000771;1.51e-09;2!CL:0002087;3.68e-08;104!CL:0000763;3.11e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-38,42;CL:0002057,1.68e-38,42;CL:0000473,1.28e-33,48;CL:0000234,1.28e-33,48;CL:0002194,8.98e-27,59;CL:0000576,8.98e-27,59;CL:0000040,8.98e-27,59;CL:0000559,8.98e-27,59;CL:0000766,1.56e-26,72;CL:0002009,6.88e-26,61;CL:0000839,6.58e-24,66;CL:0000557,1.51e-23,67;CL:0000763,1.60e-17,108;CL:0000049,1.60e-17,108;CL:0000738,9.06e-14,136;CL:0002087,1.69e-13,115;CL:0002031,6.60e-13,120;CL:0002032,1.66e-11,161;CL:0000837,1.66e-11,161;CL:0000037,5.44e-11,168;CL:0000988,2.18e-10,177;CL:0000771,1.57e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.61e-23;42!UBERON:0005425;9.48e-18;1!UBERON:0003056;8.86e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.66e-34!102;UBERON:0003061!7.66e-34!102;UBERON:0002193!3.98e-30!112;UBERON:0002371!3.74e-29!80;UBERON:0001474!1.14e-26!86;UBERON:0004765!9.66e-22!101;UBERON:0001434!9.66e-22!101;UBERON:0002405!2.66e-18!115;UBERON:0003081!7.17e-12!216;UBERON:0002204!1.32e-10!167;UBERON:0005162!1.12e-08!2;UBERON:0000122!1.12e-08!2;UBERON:0000178!1.47e-08!15;UBERON:0000179!1.47e-08!15;UBERON:0000463!1.47e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.48e-18;1!UBERON:0001785;9.48e-18;1!UBERON:0002464;9.48e-18;1!UBERON:0004904;9.48e-18;1!UBERON:0001021;9.48e-18;1!UBERON:0003714;1.51e-09;2!UBERON:0005162;1.51e-09;2!UBERON:0000122;1.51e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-20,76;UBERON:0001474,3.63e-19,82;UBERON:0000941,7.37e-18,1;UBERON:0001785,7.37e-18,1;UBERON:0002464,7.37e-18,1;UBERON:0004904,7.37e-18,1;UBERON:0001021,7.37e-18,1;UBERON:0003902,7.37e-18,1;UBERON:0005425,7.37e-18,1;UBERON:0004765,2.03e-17,90;UBERON:0002405,7.73e-17,93;UBERON:0002390,5.98e-16,98;UBERON:0003061,5.98e-16,98;UBERON:0001434,1.28e-15,100;UBERON:0002193,2.05e-14,108;UBERON:0003714,1.33e-09,2;UBERON:0005162,1.33e-09,2;UBERON:0000122,1.33e-09,2;UBERON:0002204,4.70e-09,167;UBERON:0003081,2.73e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0,0,2.76997704265939,0.200544447470142,0.651032612147555,0,0,0,0.436194716338694,0,0,0,0,0.619412741790207,0.28769239232215,0.768482119587302,2.12834006899727,0.344745680736619,0.645484683583826,0,0,0.272906150057846,1.34834090667051,1.53041946185451,2.56743221660875,1.27867425159808,0,0.199463657621632,1.27867425159808,0.870627715885752,0,0,0.75374599577023,0,4.56096573880745,0.605399502633369,0.368277635987565,1.89877432464531,0,0.637812899895131,0.838634582033504,1.12328631146495,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.309632246632152,0,0,0,0,0,0,2.76997704265939,0.200544447470142,0.651032612147555,0,0,0,0.436194716338694,0,0,0,0,0.619412741790207,0.28769239232215,0.768482119587302,2.12834006899727,0.344745680736619,0.645484683583826,0,0,0.272906150057846,1.34834090667051,1.53041946185451,2.56743221660875,1.27867425159808,0,0.199463657621632,1.27867425159808,0.870627715885752,0,0,0.75374599577023,0,4.56096573880745,0.605399502633369,0.368277635987565,1.89877432464531,0,0.637812899895131,0.838634582033504,1.12328631146495,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:10281475..10281477,+ | |||
}} | }} |
Latest revision as of 04:07, 24 July 2015
Short description: | p@chr12:10281475..10281477, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:10281475..10281477, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-38 | 42 |
defensive cell | 1.28e-33 | 48 |
phagocyte | 1.28e-33 | 48 |
monopoietic cell | 8.98e-27 | 59 |
monocyte | 8.98e-27 | 59 |
monoblast | 8.98e-27 | 59 |
promonocyte | 8.98e-27 | 59 |
myeloid leukocyte | 1.56e-26 | 72 |
macrophage dendritic cell progenitor | 6.88e-26 | 61 |
myeloid lineage restricted progenitor cell | 6.58e-24 | 66 |
granulocyte monocyte progenitor cell | 1.51e-23 | 67 |
myeloid cell | 1.60e-17 | 108 |
common myeloid progenitor | 1.60e-17 | 108 |
leukocyte | 9.06e-14 | 136 |
nongranular leukocyte | 1.69e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.60e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.66e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-11 | 161 |
hematopoietic stem cell | 5.44e-11 | 168 |
hematopoietic cell | 2.18e-10 | 177 |
eosinophil | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-20 | 76 |
bone element | 3.63e-19 | 82 |
cranial nerve II | 7.37e-18 | 1 |
cranial nerve | 7.37e-18 | 1 |
nerve trunk | 7.37e-18 | 1 |
nerve connecting eye with brain | 7.37e-18 | 1 |
nerve | 7.37e-18 | 1 |
retinal neural layer | 7.37e-18 | 1 |
presumptive neural retina | 7.37e-18 | 1 |
skeletal element | 2.03e-17 | 90 |
immune system | 7.73e-17 | 93 |
hematopoietic system | 5.98e-16 | 98 |
blood island | 5.98e-16 | 98 |
skeletal system | 1.28e-15 | 100 |
hemolymphoid system | 2.05e-14 | 108 |
neural tissue | 1.33e-09 | 2 |
multi cell component structure | 1.33e-09 | 2 |
neuron projection bundle | 1.33e-09 | 2 |
musculoskeletal system | 4.70e-09 | 167 |
lateral plate mesoderm | 2.73e-07 | 203 |