FFCP PHASE1:Hg19::chr12:109592440..109592459,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:109592440..109592459,+ to FFCP PHASE1:Hg19::chr12:109592440..109592459,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=32 | |EntrezGene=32 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=85 | |HGNC=85 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000544726_5end | |||
|cluster_id=chr12:109592440..109592459,+ | |||
|description=CAGE_peak_5_at_ACACB_5end | |||
|id=chr12:109592440..109592459,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.68e-08!53;CL:0000051!8.68e-08!53;CL:0000838!1.66e-07!52;CL:0000791!3.44e-07!18;CL:0000789!3.44e-07!18;CL:0002420!3.44e-07!18;CL:0002419!3.44e-07!18;CL:0000790!3.44e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.37e-09;18!CL:0000789;3.37e-09;18!CL:0002419;3.37e-09;18!CL:0000236;8.76e-08;13!CL:0000625;2.50e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.29e-09,18;CL:0000789,1.29e-09,18;CL:0002420,1.29e-09,18;CL:0002419,1.29e-09,18;CL:0000790,1.29e-09,18;CL:0000838,5.61e-08,52;CL:0000542,1.01e-07,53;CL:0000051,1.01e-07,53;CL:0000625,2.21e-07,11;CL:0000236,3.51e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;3.37e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.88e-27!115;UBERON:0001049!8.75e-16!57;UBERON:0005068!8.75e-16!57;UBERON:0006241!8.75e-16!57;UBERON:0007135!8.75e-16!57;UBERON:0005743!1.56e-14!86;UBERON:0001017!1.03e-13!82;UBERON:0002346!1.40e-13!90;UBERON:0003075!2.05e-13!86;UBERON:0007284!2.05e-13!86;UBERON:0000073!1.13e-12!94;UBERON:0001016!1.13e-12!94;UBERON:0002616!2.26e-12!59;UBERON:0000955!2.64e-12!69;UBERON:0006238!2.64e-12!69;UBERON:0003080!4.61e-12!42;UBERON:0002780!8.03e-12!41;UBERON:0001890!8.03e-12!41;UBERON:0006240!8.03e-12!41;UBERON:0001893!1.07e-09!34;UBERON:0003056!1.09e-09!61;UBERON:0002791!2.28e-09!33;UBERON:0002020!2.61e-09!34;UBERON:0003528!2.61e-09!34;UBERON:0000153!3.53e-09!129;UBERON:0007811!3.53e-09!129;UBERON:0001869!8.14e-09!32;UBERON:0000033!8.08e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.29e-07;53!UBERON:0002616;2.29e-07;53!UBERON:0002780;5.37e-07;41!UBERON:0001890;5.37e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.15e-23,114;UBERON:0001049,2.75e-10,56;UBERON:0005068,2.75e-10,56;UBERON:0006241,2.75e-10,56;UBERON:0007135,2.75e-10,56;UBERON:0000073,2.87e-10,53;UBERON:0002616,2.87e-10,53;UBERON:0002346,3.91e-09,86;UBERON:0003075,4.07e-09,82;UBERON:0007284,4.07e-09,82;UBERON:0002780,7.77e-09,41;UBERON:0001890,7.77e-09,41;UBERON:0003080,7.77e-09,41;UBERON:0006240,7.77e-09,41;UBERON:0001017,1.24e-08,81;UBERON:0000955,3.37e-08,68;UBERON:0006238,3.37e-08,68;UBERON:0001016,4.92e-07,89;UBERON:0003296,6.50e-07,4;UBERON:0010133,6.50e-07,4 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.563817616383885,1.0007329835313,0.446961094427288,0,0,0,1.56711376919903,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.572471974262113,1.09499540058307,0.251085279189606,0,0,0,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0.568676929949686,1.17440175733939,1.10799081706375,0.802177789880567,0.651032612147555,0,0.647787332037959,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0,0,0.512321413058201,0,0,0,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0.426224750532694,0,1.13477044938228,0,0,0,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,0.64290234678832,0,0.39783335439818,0.547992461293902,3.51992488922645,1.63841583378639,0.889509253863555,1.28019066769952,2.00197993518006,0.574752439954483,0,1.90810750907073,0.569212969109448,1.76171156811282,1.14681968437569,0,0.560508562981536,1.31692042387539,1.7703879310245,1.57204305099666,0.616804496998528,0.167186495390678,2.28145586643513,0.946895611469467,1.94826728407911,0.445641827540694,0.589211814949674,0.886135578334485,1.62482318259009,0.128091319725675,0.390178042679635,0.493313713811028,0,0.289803085735052,2.52087157375503,3.74557159325598,2.09071047609954,0.339928028092699,1.91610246800961,1.37450978193052,1.01207876807801,1.59282707162048,3.25541726928209,1.90090408889675,0.903450714466637,1.4078527226986,1.24930726552346,0.473554504088034,1.64225599384209,1.00803371612366,0,1.15859523106239,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0.087834785693126,1.30979075497713,0.728590576585084,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0.417989933073621,0.775250277507987,0,0,0.402829317109147,0,0.24406205754817,0,0,0.625098097988558,0.44905874525234,0.225222960966644,0,0,0.183201743930407,3.9534125230819,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0.326923806226917,0.302714855289863,0,0,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.280901613404497,0.204154171254893,0.491337269247072,0.309977343527296,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.717558542755448,0,0.211931901159562,0,0.103052529238439,0,0,1.0126579934476,0.0974370051611986,0.252433774244115,0,0.323292113637624,0,0,0.169560592310488,0,0.272746120590835,0.286804595389004,1.21973706129595,1.59035721985782,1.16193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0,0.354920400119532,0.674338760312407,0.241011029883482,0.441175890929576,0.435758888184812,0.474541238222193,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0.882926198829301,0.737930631258681,0,0,0,0.100528972411631,0.462942225792648,0,0,0,0.34779121492523,0,0.577465791044295,0,0,0.790204397959275,0.858486162094873,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0.283550194484773,0,0,0.383382679165211,0,0.176096868026452,1.24396869324463,1.8735593944205,2.39860623510122,0.888970520090367,0.763976851116555,0,0,0.616964956219941,0.300343057843917,0,0.112131084345361,0.87192013766656,0.22001485746285,0,3.57656445851882,0.845302752556,0,0,1.02882949704857,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.224170287987055,0.591092280605782,1.07813787429759,0.898401253958239,0.76228387266739,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.24060815673732,1.94142780736755,0.640365346820666,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.616838775210622,0.177561725313127,0.164254312027618,0.519254429183621,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0.769350375349168,0.328014645699706,0.325378394664303,0.309123034943167,0.27470839445503,0.660075999364704,0,0,0,0.096670718292122,0.308097234229289,0.15350367472613,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,1.52234282769651,0,1.13929437434833,1.19115887728894,1.23408681925858,0.648473311192717,0.540031437238115,0,0.213648142254946,0.962479855263359,2.45040215981032,0.929015875628594,1.15415370381156,0.924843963529383,0.797131363644112,0,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0.614481528616916,1.3420566473545,0.500547425135725,0,0,0,1.352278392379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|short_description=p5@ACACB | |||
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Latest revision as of 06:27, 16 September 2015
Short description: | p5@ACACB |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ACACB_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000544726_5end |
EntrezGene: | ACACB |
HGNC: | 85 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.29e-09 | 18 |
alpha-beta T cell | 1.29e-09 | 18 |
immature T cell | 1.29e-09 | 18 |
mature T cell | 1.29e-09 | 18 |
immature alpha-beta T cell | 1.29e-09 | 18 |
lymphoid lineage restricted progenitor cell | 5.61e-08 | 52 |
lymphocyte | 1.01e-07 | 53 |
common lymphoid progenitor | 1.01e-07 | 53 |
CD8-positive, alpha-beta T cell | 2.21e-07 | 11 |
B cell | 3.51e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.15e-23 | 114 |
neural tube | 2.75e-10 | 56 |
neural rod | 2.75e-10 | 56 |
future spinal cord | 2.75e-10 | 56 |
neural keel | 2.75e-10 | 56 |
regional part of nervous system | 2.87e-10 | 53 |
regional part of brain | 2.87e-10 | 53 |
neurectoderm | 3.91e-09 | 86 |
neural plate | 4.07e-09 | 82 |
presumptive neural plate | 4.07e-09 | 82 |
regional part of forebrain | 7.77e-09 | 41 |
forebrain | 7.77e-09 | 41 |
anterior neural tube | 7.77e-09 | 41 |
future forebrain | 7.77e-09 | 41 |
central nervous system | 1.24e-08 | 81 |
brain | 3.37e-08 | 68 |
future brain | 3.37e-08 | 68 |
nervous system | 4.92e-07 | 89 |
gland of diencephalon | 6.50e-07 | 4 |
neuroendocrine gland | 6.50e-07 | 4 |