FFCP PHASE1:Hg19::chr12:15125954..15125982,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5149 | |EntrezGene=5149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8790 | |HGNC=8790 | ||
|TSSclassifier=strong | |||
|UniProt=Q13956 | |UniProt=Q13956 | ||
|association_with_transcript=0bp_to_ENST00000266395,NM_006205,uc001rcr.2_5end | |||
|cluster_id=chr12:15125954..15125982,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_PDE6H_5end | |||
|id=chr12:15125954..15125982,+ | |||
|ontology_enrichment_celltype=CL:0002541!4.74e-21!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.15e-19;3!CL:0000047;2.87e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.15e-19,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.43e-20;3 | |||
|ontology_enrichment_disease=DOID:5409!1.18e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!4.74e-21!3;UBERON:0000920!4.74e-21!3;UBERON:0003124!1.49e-15!7;UBERON:0001905!2.80e-15!2;UBERON:0002757!2.80e-15!2;UBERON:0010134!2.80e-15!2;UBERON:0002784!2.80e-15!2;UBERON:0005408!2.80e-15!2;UBERON:0001899!2.80e-15!2;UBERON:0005631!8.14e-12!14;UBERON:0000158!8.14e-12!14;UBERON:0003075!1.19e-10!86;UBERON:0007284!1.19e-10!86;UBERON:0005743!1.51e-10!86;UBERON:0002346!4.50e-10!90;UBERON:0006331!5.24e-10!3;UBERON:0001017!2.25e-09!82;UBERON:0000073!2.43e-09!94;UBERON:0001016!2.43e-09!94;UBERON:0003056!3.31e-09!61;UBERON:0000970!1.81e-08!20;UBERON:0002038!4.11e-08!1;UBERON:0009661!4.11e-08!1;UBERON:0003296!4.56e-08!4;UBERON:0010133!4.56e-08!4;UBERON:0002104!4.70e-08!21;UBERON:0002336!7.59e-08!1;UBERON:0001018!7.59e-08!1;UBERON:0002473!7.59e-08!1;UBERON:0005340!7.59e-08!1;UBERON:0002316!7.59e-08!1;UBERON:0003544!7.59e-08!1;UBERON:0001020!7.59e-08!1;UBERON:0005970!7.59e-08!1;UBERON:0002437!7.59e-08!1;UBERON:0001882!1.14e-07!1;UBERON:0005403!1.14e-07!1;UBERON:0007023!2.43e-07!115;UBERON:0000153!2.43e-07!129;UBERON:0007811!2.43e-07!129;UBERON:0000020!2.49e-07!23;UBERON:0002370!2.51e-07!4;UBERON:0005058!2.51e-07!4;UBERON:0009113!2.51e-07!4;UBERON:0003295!2.51e-07!4;UBERON:0005562!2.51e-07!4;UBERON:0002308!3.58e-07!9;UBERON:0000125!3.58e-07!9;UBERON:0002420!4.34e-07!9;UBERON:0007245!4.34e-07!9;UBERON:0010009!4.34e-07!9;UBERON:0010011!4.34e-07!9;UBERON:0000454!4.34e-07!9;UBERON:0001032!5.15e-07!24;UBERON:0004456!5.15e-07!24;UBERON:0004121!6.51e-07!169;UBERON:0000478!8.43e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.49e-30;2!UBERON:0002757;4.49e-30;2!UBERON:0010134;4.49e-30;2!UBERON:0005408;4.49e-30;2!UBERON:0001899;4.49e-30;2!UBERON:0003124;1.15e-19;3!UBERON:0000920;1.15e-19;3!UBERON:0003296;1.44e-15;4!UBERON:0010133;1.44e-15;4!UBERON:0002784;1.44e-15;4!UBERON:0002038;3.17e-15;1!UBERON:0009661;3.17e-15;1!UBERON:0002950;3.17e-15;1!UBERON:0001891;3.17e-15;1!UBERON:0000966;1.89e-12;5!UBERON:0005388;1.89e-12;5!UBERON:0001802;1.89e-12;5!UBERON:0000970;9.29e-12;20!UBERON:0002104;3.27e-11;21!UBERON:0000020;2.93e-10;23!UBERON:0001032;7.66e-10;24!UBERON:0004456;7.66e-10;24!UBERON:0001894;2.69e-09;7!UBERON:0002360;2.00e-08;2!UBERON:0000094;2.00e-08;2!UBERON:0010743;2.00e-08;2!UBERON:0002148;2.87e-08;2!UBERON:0006331;2.87e-08;2!UBERON:0009662;2.87e-08;2!UBERON:0000019;2.37e-07;19!UBERON:0000047;2.37e-07;19!UBERON:0004088;2.37e-07;19!UBERON:0010230;2.37e-07;19!UBERON:0000125;4.15e-07;9!UBERON:0002308;4.15e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.49e-30,2;UBERON:0002757,4.49e-30,2;UBERON:0010134,4.49e-30,2;UBERON:0005408,4.49e-30,2;UBERON:0001899,4.49e-30,2;UBERON:0000920,1.15e-19,3;UBERON:0003296,1.44e-15,4;UBERON:0010133,1.44e-15,4;UBERON:0002784,1.44e-15,4;UBERON:0002038,3.66e-15,1;UBERON:0009661,3.66e-15,1;UBERON:0002950,3.66e-15,1;UBERON:0001891,3.66e-15,1;UBERON:0009616,3.66e-15,1;UBERON:0010286,3.66e-15,1;UBERON:0000970,3.27e-11,21;UBERON:0002104,3.27e-11,21;UBERON:0000966,1.57e-10,6;UBERON:0005388,1.57e-10,6;UBERON:0001802,1.57e-10,6;UBERON:0001017,3.04e-10,81;UBERON:0000020,7.66e-10,24;UBERON:0001032,7.66e-10,24;UBERON:0004456,7.66e-10,24;UBERON:0001894,2.69e-09,7;UBERON:0006222,2.69e-09,7;UBERON:0001016,3.61e-09,89;UBERON:0003124,5.59e-09,7;UBERON:0002360,2.00e-08,2;UBERON:0000094,2.00e-08,2;UBERON:0010743,2.00e-08,2;UBERON:0002148,2.87e-08,2;UBERON:0006331,2.87e-08,2;UBERON:0009662,2.87e-08,2;UBERON:0003056,4.97e-08,61;UBERON:0003075,6.74e-08,82;UBERON:0007284,6.74e-08,82;UBERON:0002346,1.65e-07,86;UBERON:0004121,4.21e-07,171;UBERON:0000924,4.21e-07,171;UBERON:0006601,4.21e-07,171;UBERON:0000125,4.28e-07,9;UBERON:0002308,4.28e-07,9;UBERON:0000955,4.76e-07,68;UBERON:0006238,4.76e-07,68;UBERON:0000019,5.23e-07,20;UBERON:0000047,5.23e-07,20;UBERON:0010312,5.23e-07,20;UBERON:0004088,5.23e-07,20;UBERON:0010230,5.23e-07,20;UBERON:0003072,5.23e-07,20;UBERON:0004128,5.23e-07,20;UBERON:0003071,5.23e-07,20 | |||
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|short_description=p1@PDE6H | |||
}} | }} |
Latest revision as of 14:35, 17 September 2015
Short description: | p1@PDE6H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE6H_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000266395, NM_006205, uc001rcr.2_5end |
EntrezGene: | PDE6H |
HGNC: | 8790 |
UniProt: | Q13956 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.15e-19 | 3 |