FFCP PHASE1:Hg19::chr12:45638567..45638571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:45638567..45638571,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:45638567..45638571,+ | |||
|id=chr12:45638567..45638571,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.03e-66!42;CL:0000860!2.05e-61!45;CL:0002194!3.04e-42!63;CL:0000576!3.04e-42!63;CL:0000040!3.04e-42!63;CL:0000559!3.04e-42!63;CL:0002009!7.25e-41!65;CL:0000839!9.22e-38!70;CL:0000557!3.42e-37!71;CL:0000766!1.44e-34!76;CL:0000763!1.65e-22!112;CL:0000049!1.65e-22!112;CL:0002087!5.30e-21!119;CL:0002031!4.99e-20!124;CL:0000738!2.25e-17!140;CL:0002032!3.00e-14!165;CL:0000837!3.00e-14!165;CL:0000037!1.55e-13!172;CL:0000566!1.55e-13!172;CL:0000988!1.31e-12!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-54;33!CL:0002057;2.98e-54;33!CL:0000473;1.61e-41;39!CL:0000234;1.61e-41;39!CL:0000576;2.73e-25;48!CL:0000766;2.84e-14;69!CL:0002087;1.42e-10;104!CL:0000763;6.34e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.15e-46,42;CL:0002057,1.15e-46,42;CL:0000473,9.28e-41,48;CL:0000234,9.28e-41,48;CL:0002194,1.75e-32,59;CL:0000576,1.75e-32,59;CL:0000040,1.75e-32,59;CL:0000559,1.75e-32,59;CL:0002009,2.05e-31,61;CL:0000839,5.09e-29,66;CL:0000557,1.39e-28,67;CL:0000766,1.41e-26,72;CL:0000763,1.50e-17,108;CL:0000049,1.50e-17,108;CL:0002087,1.92e-16,115;CL:0002031,9.94e-16,120;CL:0000738,8.59e-14,136;CL:0002032,1.59e-11,161;CL:0000837,1.59e-11,161;CL:0000037,5.20e-11,168;CL:0000988,2.09e-10,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.55e-32;42!UBERON:0005425;1.33e-17;1!CL:0000049;6.17e-07;108!UBERON:0003056;9.91e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.06e-32!80;UBERON:0001474!3.21e-30!86;UBERON:0004765!2.71e-25!101;UBERON:0001434!2.71e-25!101;UBERON:0002390!5.13e-25!102;UBERON:0003061!5.13e-25!102;UBERON:0002193!1.65e-22!112;UBERON:0002405!7.68e-22!115;UBERON:0002204!4.87e-14!167;UBERON:0003081!4.27e-10!216;UBERON:0000941!1.84e-09!1;UBERON:0004904!1.84e-09!1;UBERON:0002464!1.84e-09!1;UBERON:0001021!1.84e-09!1;UBERON:0001785!1.84e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.33e-17;1!UBERON:0001785;1.33e-17;1!UBERON:0002464;1.33e-17;1!UBERON:0004904;1.33e-17;1!UBERON:0001021;1.33e-17;1!UBERON:0003714;1.78e-09;2!UBERON:0005162;1.78e-09;2!UBERON:0000122;1.78e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-25,76;UBERON:0001474,2.73e-23,82;UBERON:0004765,3.55e-21,90;UBERON:0002405,1.78e-20,93;UBERON:0002390,2.10e-19,98;UBERON:0003061,2.10e-19,98;UBERON:0001434,5.28e-19,100;UBERON:0000941,1.44e-17,1;UBERON:0001785,1.44e-17,1;UBERON:0002464,1.44e-17,1;UBERON:0004904,1.44e-17,1;UBERON:0001021,1.44e-17,1;UBERON:0003902,1.44e-17,1;UBERON:0005425,1.44e-17,1;UBERON:0002193,1.50e-17,108;UBERON:0002204,4.42e-11,167;UBERON:0003714,1.86e-09,2;UBERON:0005162,1.86e-09,2;UBERON:0000122,1.86e-09,2;UBERON:0003081,5.90e-09,203 | |||
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|short_description=p@chr12:45638567..45638571,+ | |||
}} | }} |
Latest revision as of 08:35, 24 July 2015
Short description: | p@chr12:45638567..45638571, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:45638567..45638571, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.15e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.15e-46 | 42 |
defensive cell | 9.28e-41 | 48 |
phagocyte | 9.28e-41 | 48 |
monopoietic cell | 1.75e-32 | 59 |
monocyte | 1.75e-32 | 59 |
monoblast | 1.75e-32 | 59 |
promonocyte | 1.75e-32 | 59 |
macrophage dendritic cell progenitor | 2.05e-31 | 61 |
myeloid lineage restricted progenitor cell | 5.09e-29 | 66 |
granulocyte monocyte progenitor cell | 1.39e-28 | 67 |
myeloid leukocyte | 1.41e-26 | 72 |
myeloid cell | 1.50e-17 | 108 |
common myeloid progenitor | 1.50e-17 | 108 |
nongranular leukocyte | 1.92e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.94e-16 | 120 |
leukocyte | 8.59e-14 | 136 |
hematopoietic oligopotent progenitor cell | 1.59e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-11 | 161 |
hematopoietic stem cell | 5.20e-11 | 168 |
hematopoietic cell | 2.09e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.68e-25 | 76 |
bone element | 2.73e-23 | 82 |
skeletal element | 3.55e-21 | 90 |
immune system | 1.78e-20 | 93 |
hematopoietic system | 2.10e-19 | 98 |
blood island | 2.10e-19 | 98 |
skeletal system | 5.28e-19 | 100 |
cranial nerve II | 1.44e-17 | 1 |
cranial nerve | 1.44e-17 | 1 |
nerve trunk | 1.44e-17 | 1 |
nerve connecting eye with brain | 1.44e-17 | 1 |
nerve | 1.44e-17 | 1 |
retinal neural layer | 1.44e-17 | 1 |
presumptive neural retina | 1.44e-17 | 1 |
hemolymphoid system | 1.50e-17 | 108 |
musculoskeletal system | 4.42e-11 | 167 |
neural tissue | 1.86e-09 | 2 |
multi cell component structure | 1.86e-09 | 2 |
neuron projection bundle | 1.86e-09 | 2 |
lateral plate mesoderm | 5.90e-09 | 203 |