FFCP PHASE1:Hg19::chr12:51632600..51632620,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:51632600..51632620,+ to FFCP PHASE1:Hg19::chr12:51632600..51632620,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9802 | |EntrezGene=9802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2684 | |HGNC=2684 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDT5,C9JA96,F8VU62 | |UniProt=B4DDT5,C9JA96,F8VU62 | ||
|association_with_transcript=0bp_to_ENST00000425012,ENST00000439799,ENST00000549041,ENST00000549555,ENST00000551919,ENST00000552173_5end | |||
|cluster_id=chr12:51632600..51632620,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_DAZAP2_5end | |||
|id=chr12:51632600..51632620,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.15e-41!140;CL:0000766!3.14e-36!76;CL:0000037!1.06e-33!172;CL:0000566!1.06e-33!172;CL:0002031!1.78e-33!124;CL:0002032!2.66e-31!165;CL:0000837!2.66e-31!165;CL:0000839!4.01e-31!70;CL:0000988!1.17e-30!182;CL:0000557!2.14e-30!71;CL:0002087!5.09e-30!119;CL:0002009!3.17e-29!65;CL:0002194!3.74e-28!63;CL:0000576!3.74e-28!63;CL:0000040!3.74e-28!63;CL:0000559!3.74e-28!63;CL:0000763!9.04e-28!112;CL:0000049!9.04e-28!112;CL:0002057!8.98e-27!42;CL:0000860!3.23e-26!45;CL:0000791!1.55e-07!18;CL:0000789!1.55e-07!18;CL:0002420!1.55e-07!18;CL:0002419!1.55e-07!18;CL:0000790!1.55e-07!18;CL:0000094!9.16e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.31e-20;33!CL:0002057;5.31e-20;33!CL:0000576;2.32e-18;48!CL:0000473;1.05e-17;39!CL:0000234;1.05e-17;39!CL:0000766;2.48e-16;69!CL:0000738;1.06e-09;136!CL:0002087;1.47e-09;104!CL:0000763;9.59e-08;100!CL:0000791;1.55e-07;18!CL:0000789;1.55e-07;18!CL:0002419;1.55e-07;18!CL:0000094;9.16e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.03e-41,136;CL:0000766,8.62e-37,72;CL:0000037,1.62e-33,168;CL:0002031,1.75e-33,120;CL:0000839,1.28e-31,66;CL:0002032,4.03e-31,161;CL:0000837,4.03e-31,161;CL:0000557,7.53e-31,67;CL:0000988,1.05e-30,177;CL:0002087,5.27e-30,115;CL:0002009,9.55e-30,61;CL:0002194,1.14e-28,59;CL:0000576,1.14e-28,59;CL:0000040,1.14e-28,59;CL:0000559,1.14e-28,59;CL:0000473,7.23e-28,48;CL:0000234,7.23e-28,48;CL:0000763,9.26e-28,108;CL:0000049,9.26e-28,108;CL:0000860,8.98e-27,42;CL:0002057,8.98e-27,42;CL:0000791,1.55e-07,18;CL:0000789,1.55e-07,18;CL:0002420,1.55e-07,18;CL:0002419,1.55e-07,18;CL:0000790,1.55e-07,18;CL:0000094,9.16e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.05e-19;42!CL:0000049;3.93e-08;108!CL:0000790;1.55e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.35e-29!102;UBERON:0003061!7.35e-29!102;UBERON:0002193!4.57e-27!112;UBERON:0002371!1.30e-24!80;UBERON:0002405!1.10e-20!115;UBERON:0001474!1.50e-20!86;UBERON:0007023!1.03e-17!115;UBERON:0004765!8.89e-16!101;UBERON:0001434!8.89e-16!101;UBERON:0001049!1.50e-07!57;UBERON:0005068!1.50e-07!57;UBERON:0006241!1.50e-07!57;UBERON:0007135!1.50e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.25e-29,98;UBERON:0003061,6.25e-29,98;UBERON:0002193,4.80e-27,108;UBERON:0002371,9.02e-25,76;UBERON:0002405,3.07e-23,93;UBERON:0001474,1.46e-20,82;UBERON:0004765,4.56e-18,90;UBERON:0007023,1.55e-17,114;UBERON:0001434,6.36e-15,100;UBERON:0001049,1.20e-07,56;UBERON:0005068,1.20e-07,56;UBERON:0006241,1.20e-07,56;UBERON:0007135,1.20e-07,56;UBERON:0000073,5.90e-07,53;UBERON:0002616,5.90e-07,53 | |||
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| ||
|short_description=p1@DAZAP2 | |||
}} | }} |
Latest revision as of 19:43, 18 September 2015
Short description: | p1@DAZAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DAZAP2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000425012, ENST00000439799, ENST00000549041, ENST00000549555, ENST00000551919, ENST00000552173_5end |
EntrezGene: | DAZAP2 |
HGNC: | 2684 |
UniProt: | B4DDT5C9JA96F8VU62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.03e-41 | 136 |
myeloid leukocyte | 8.62e-37 | 72 |
hematopoietic stem cell | 1.62e-33 | 168 |
hematopoietic lineage restricted progenitor cell | 1.75e-33 | 120 |
myeloid lineage restricted progenitor cell | 1.28e-31 | 66 |
hematopoietic oligopotent progenitor cell | 4.03e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.03e-31 | 161 |
granulocyte monocyte progenitor cell | 7.53e-31 | 67 |
hematopoietic cell | 1.05e-30 | 177 |
nongranular leukocyte | 5.27e-30 | 115 |
macrophage dendritic cell progenitor | 9.55e-30 | 61 |
monopoietic cell | 1.14e-28 | 59 |
monocyte | 1.14e-28 | 59 |
monoblast | 1.14e-28 | 59 |
promonocyte | 1.14e-28 | 59 |
defensive cell | 7.23e-28 | 48 |
phagocyte | 7.23e-28 | 48 |
myeloid cell | 9.26e-28 | 108 |
common myeloid progenitor | 9.26e-28 | 108 |
classical monocyte | 8.98e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.98e-27 | 42 |
mature alpha-beta T cell | 1.55e-07 | 18 |
alpha-beta T cell | 1.55e-07 | 18 |
immature T cell | 1.55e-07 | 18 |
mature T cell | 1.55e-07 | 18 |
immature alpha-beta T cell | 1.55e-07 | 18 |
granulocyte | 9.16e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.25e-29 | 98 |
blood island | 6.25e-29 | 98 |
hemolymphoid system | 4.80e-27 | 108 |
bone marrow | 9.02e-25 | 76 |
immune system | 3.07e-23 | 93 |
bone element | 1.46e-20 | 82 |
skeletal element | 4.56e-18 | 90 |
adult organism | 1.55e-17 | 114 |
skeletal system | 6.36e-15 | 100 |
neural tube | 1.20e-07 | 56 |
neural rod | 1.20e-07 | 56 |
future spinal cord | 1.20e-07 | 56 |
neural keel | 1.20e-07 | 56 |
regional part of nervous system | 5.90e-07 | 53 |
regional part of brain | 5.90e-07 | 53 |