FFCP PHASE1:Hg19::chr12:7055767..7055804,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:7055767..7055804,+ to FFCP PHASE1:Hg19::chr12:7055767..7055804,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5777 | |EntrezGene=5777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9658 | |HGNC=9658 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000447931,ENST00000534900_5end | |||
|cluster_id=chr12:7055767..7055804,+ | |||
|description=CAGE_peak_3_at_PTPN6_5end | |||
|id=chr12:7055767..7055804,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.58e-38!254;CL:0000223!4.25e-13!59;CL:0002076!6.86e-12!43;CL:1000497!3.35e-08!18;CL:0002518!3.35e-08!18;CL:0002251!8.40e-08!21;CL:1000449!1.24e-07!16;CL:0000039!9.45e-07!7;CL:0000586!9.45e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.21e-13;42!CL:0002251;6.37e-11;20!CL:1000497;7.24e-11;17!CL:0002518;7.24e-11;17!CL:1000449;3.74e-10;15!CL:1000507;5.07e-10;10!CL:1000494;5.07e-10;10!CL:0000039;3.47e-08;7!CL:0000586;3.47e-08;7!CL:0002681;8.22e-08;12!CL:0002584;8.22e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.75e-49,253;CL:0000223,5.00e-19,58;CL:0002076,1.07e-16,42;CL:0002251,8.19e-11,20;CL:1000497,1.05e-10,17;CL:0002518,1.05e-10,17;CL:1000507,4.41e-10,10;CL:1000494,4.41e-10,10;CL:1000449,5.29e-10,15;CL:0000039,3.49e-08,7;CL:0000586,3.49e-08,7;CL:0002681,1.13e-07,12;CL:0002584,1.13e-07,12;CL:0000082,8.97e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.07e-10;58!UBERON:0008947;6.35e-09;29!UBERON:0001041;3.30e-07;30!UBERON:0006595;9.40e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.87e-27!106;DOID:0050687!1.45e-17!143;DOID:299!6.33e-08!25;DOID:162!1.04e-07!235;DOID:14566!7.82e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:305;9.51e-11;106!DOID:299;1.59e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.78e-33,106;DOID:0050687,5.73e-24,143;DOID:299,1.52e-10,25;DOID:162,1.93e-09,235;DOID:14566,1.09e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.32e-18!169;UBERON:0000925!8.32e-18!169;UBERON:0006595!8.32e-18!169;UBERON:0001007!1.21e-14!155;UBERON:0001555!1.21e-14!155;UBERON:0007026!1.21e-14!155;UBERON:0004921!1.39e-14!129;UBERON:0004185!1.39e-14!129;UBERON:0000077!2.23e-13!130;UBERON:0000466!4.27e-13!126;UBERON:0005177!2.10e-12!107;UBERON:0001041!3.19e-12!98;UBERON:0000464!3.27e-12!104;UBERON:0001004!7.22e-11!72;UBERON:0006554!8.93e-11!44;UBERON:0001008!3.48e-10!45;UBERON:0005911!5.10e-10!82;UBERON:0002113!7.66e-10!27;UBERON:0003918!7.66e-10!27;UBERON:0005095!7.66e-10!27;UBERON:0007687!7.66e-10!27;UBERON:0008947!1.70e-09!38;UBERON:0003258!1.70e-09!38;UBERON:0000065!2.22e-09!53;UBERON:0005172!6.58e-09!55;UBERON:0005173!6.58e-09!55;UBERON:0000080!8.21e-09!18;UBERON:0002120!8.21e-09!18;UBERON:0004875!8.21e-09!18;UBERON:0005721!8.21e-09!18;UBERON:0005754!8.21e-09!18;UBERON:0007297!8.21e-09!18;UBERON:0003887!1.14e-08!21;UBERON:0009569!1.65e-08!113;UBERON:0000058!2.47e-08!26;UBERON:0006555!3.29e-08!17;UBERON:0005103!3.29e-08!17;UBERON:0000083!3.29e-08!17;UBERON:0009201!3.29e-08!17;UBERON:0004819!3.29e-08!17;UBERON:0006553!3.29e-08!17;UBERON:0003074!3.29e-08!17;UBERON:0003060!3.29e-08!17;UBERON:0004876!4.04e-08!20;UBERON:0000489!5.28e-08!32;UBERON:0000072!8.75e-08!46;UBERON:0004211!1.24e-07!16;UBERON:0001285!1.24e-07!16;UBERON:0007684!1.24e-07!16;UBERON:0003220!1.24e-07!16;UBERON:0004208!1.24e-07!16;UBERON:0005153!1.83e-07!37;UBERON:0002553!2.65e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;8.08e-14;30!UBERON:0001008;8.08e-14;30!UBERON:0002113;1.04e-11;24!UBERON:0011143;1.04e-11;24!UBERON:0006555;3.74e-10;15!UBERON:0004819;3.74e-10;15!UBERON:0001285;3.74e-10;15!UBERON:0007684;3.74e-10;15!UBERON:0004211;5.07e-10;10!UBERON:0009773;5.07e-10;10!UBERON:0001231;5.07e-10;10!UBERON:0004810;5.07e-10;10!UBERON:0000489;2.78e-09;29!UBERON:0000065;8.43e-09;44!UBERON:0004921;2.11e-08;33!UBERON:0000072;4.07e-08;37!UBERON:0004807;4.20e-08;22!UBERON:0001225;8.22e-08;12!UBERON:0008987;8.22e-08;12!UBERON:0005911;1.21e-07;36!UBERON:0001004;2.25e-07;65!UBERON:0002048;2.81e-07;22!UBERON:0000117;2.81e-07;22!UBERON:0000171;2.81e-07;22!UBERON:0000170;2.81e-07;22!UBERON:0005177;6.16e-07;99!UBERON:0005178;7.93e-07;34!UBERON:0002224;7.93e-07;34!UBERON:0005172;8.52e-07;52!UBERON:0005173;8.52e-07;52 | |||
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| ||
|short_description=p3@PTPN6 | |||
}} | }} |
Latest revision as of 08:03, 20 September 2015
Short description: | p3@PTPN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPN6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447931, ENST00000534900_5end |
EntrezGene: | PTPN6 |
HGNC: | 9658 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.75e-49 | 253 |
endodermal cell | 5.00e-19 | 58 |
endo-epithelial cell | 1.07e-16 | 42 |
epithelial cell of alimentary canal | 8.19e-11 | 20 |
kidney cell | 1.05e-10 | 17 |
kidney epithelial cell | 1.05e-10 | 17 |
kidney tubule cell | 4.41e-10 | 10 |
nephron tubule epithelial cell | 4.41e-10 | 10 |
epithelial cell of nephron | 5.29e-10 | 15 |
germ line cell | 3.49e-08 | 7 |
germ cell | 3.49e-08 | 7 |
kidney cortical cell | 1.13e-07 | 12 |
renal cortical epithelial cell | 1.13e-07 | 12 |
epithelial cell of lung | 8.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.78e-33 | 106 |
cell type cancer | 5.73e-24 | 143 |
adenocarcinoma | 1.52e-10 | 25 |
cancer | 1.93e-09 | 235 |
disease of cellular proliferation | 1.09e-08 | 239 |