FFCP PHASE1:Hg19::chr12:75874561..75874574,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:75874561..75874574,+ to FFCP PHASE1:Hg19::chr12:75874561..75874574,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11010 | |EntrezGene=11010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17001 | |HGNC=17001 | ||
|TSSclassifier=strong | |||
|UniProt=B4E3S5 | |UniProt=B4E3S5 | ||
|association_with_transcript=28bp_to_ENST00000536703_5end | |||
|cluster_id=chr12:75874561..75874574,+ | |||
|coexpression_cluster_id=C3332 | |||
|description=CAGE_peak_3_at_GLIPR1_5end | |||
|id=chr12:75874561..75874574,+ | |||
|ontology_enrichment_celltype=CL:0000048!4.98e-34!430;CL:0000723!3.69e-32!436;CL:0002371!6.49e-31!591;CL:0000034!6.97e-30!444;CL:0000144!4.27e-28!625;CL:0002320!2.66e-20!365;CL:0000134!9.31e-20!358;CL:0000055!2.15e-18!180;CL:0002009!7.31e-18!65;CL:0002194!1.24e-17!63;CL:0000576!1.24e-17!63;CL:0000040!1.24e-17!63;CL:0000559!1.24e-17!63;CL:0002057!5.75e-17!42;CL:0000766!2.80e-16!76;CL:0000680!4.29e-16!57;CL:0000056!4.29e-16!57;CL:0000355!4.29e-16!57;CL:0000003!5.77e-16!722;CL:0000187!5.98e-15!54;CL:0000192!7.01e-15!42;CL:0000514!7.01e-15!42;CL:0000359!1.08e-14!32;CL:0000219!1.56e-14!390;CL:0000548!1.86e-14!679;CL:0000004!1.86e-14!679;CL:0000255!1.86e-14!679;CL:0000012!2.54e-14!682;CL:0000860!7.50e-14!45;CL:0000557!1.11e-13!71;CL:0000183!4.93e-13!59;CL:0000839!1.51e-12!70;CL:0000057!1.16e-11!75;CL:0000393!1.43e-11!60;CL:0000211!1.43e-11!60;CL:0000222!2.88e-09!119;CL:0000738!1.22e-08!140;CL:0002087!3.33e-08!119;CL:0002620!1.64e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.92e-14;39!CL:0000234;4.92e-14;39!CL:0000860;5.79e-14;33!CL:0002057;5.79e-14;33!CL:0000359;6.72e-14;32!CL:0000576;8.29e-11;48!CL:0000192;9.06e-11;43!CL:0000187;2.04e-08;55!CL:0000766;4.81e-08;69!CL:0002620;1.43e-07;23!CL:0000134;3.02e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.06e-36,427;CL:0000723,4.09e-34,433;CL:0000034,1.35e-31,441;CL:0002320,1.05e-21,361;CL:0000134,3.78e-21,354;CL:0002009,1.90e-20,61;CL:0002194,2.97e-20,59;CL:0000576,2.97e-20,59;CL:0000040,2.97e-20,59;CL:0000559,2.97e-20,59;CL:0000473,7.37e-20,48;CL:0000234,7.37e-20,48;CL:0000766,4.87e-18,72;CL:0000860,4.53e-17,42;CL:0002057,4.53e-17,42;CL:0000680,4.86e-16,58;CL:0000056,4.86e-16,58;CL:0000355,4.86e-16,58;CL:0000219,6.61e-16,386;CL:0000557,2.74e-15,67;CL:0000187,6.83e-15,55;CL:0000359,8.82e-15,32;CL:0000192,9.13e-15,43;CL:0000514,9.13e-15,43;CL:0000839,4.38e-14,66;CL:0000057,3.19e-12,76;CL:0000393,1.21e-11,61;CL:0000211,1.21e-11,61;CL:0000738,4.78e-09,136;CL:0002087,8.16e-09,115;CL:0000222,1.08e-08,121;CL:0002620,1.50e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-12;42!CL:0000514;9.06e-11;43!CL:0000355;2.16e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.34e-28!167;UBERON:0003081!1.99e-22!216;UBERON:0002384!2.75e-20!375;UBERON:0000914!2.44e-16!83;UBERON:0002329!2.44e-16!83;UBERON:0003077!2.44e-16!83;UBERON:0003059!2.44e-16!83;UBERON:0007282!2.44e-16!83;UBERON:0009618!2.44e-16!83;UBERON:0007285!2.44e-16!83;UBERON:0002371!2.63e-15!80;UBERON:0002390!1.10e-14!102;UBERON:0003061!1.10e-14!102;UBERON:0001637!1.28e-14!42;UBERON:0003509!1.28e-14!42;UBERON:0004572!1.28e-14!42;UBERON:0004765!1.69e-14!101;UBERON:0001434!1.69e-14!101;UBERON:0004290!2.58e-14!70;UBERON:0000486!2.10e-13!82;UBERON:0001474!3.49e-13!86;UBERON:0001134!3.61e-13!61;UBERON:0002036!3.61e-13!61;UBERON:0003082!3.61e-13!61;UBERON:0002193!1.19e-12!112;UBERON:0004535!2.22e-12!110;UBERON:0004573!2.35e-12!33;UBERON:0004571!2.35e-12!33;UBERON:0002385!2.50e-12!63;UBERON:0001015!2.50e-12!63;UBERON:0000383!2.50e-12!63;UBERON:0001009!2.69e-11!113;UBERON:0004872!2.06e-10!84;UBERON:0001981!2.83e-10!60;UBERON:0007500!2.83e-10!60;UBERON:0004537!2.83e-10!60;UBERON:0006965!2.83e-10!60;UBERON:0002049!4.38e-10!79;UBERON:0007798!4.38e-10!79;UBERON:0000926!3.58e-09!448;UBERON:0004120!3.58e-09!448;UBERON:0006603!3.58e-09!448;UBERON:0000055!4.91e-08!69;UBERON:0002405!7.25e-08!115;UBERON:0005256!4.28e-07!143;UBERON:0000947!6.63e-07!21;UBERON:0010191!6.63e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.98e-11;33!UBERON:0004571;2.98e-11;33!UBERON:0001637;9.10e-11;42!UBERON:0003509;9.10e-11;42!UBERON:0004572;9.10e-11;42!UBERON:0000947;5.92e-07;21!UBERON:0010191;5.92e-07;21 | |||
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| ||
|short_description=p3@GLIPR1 | |||
}} | }} |
Latest revision as of 19:46, 24 September 2015
Short description: | p3@GLIPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GLIPR1_5end |
Coexpression cluster: | C3332_leiomyoma_Fibroblast_Mallassezderived_Smooth_CD14_Osteoblast_mesenchymal |
Association with transcript: | 28bp_to_ENST00000536703_5end |
EntrezGene: | GLIPR1 |
HGNC: | 17001 |
UniProt: | B4E3S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.06e-36 | 427 |
somatic stem cell | 4.09e-34 | 433 |
stem cell | 1.35e-31 | 441 |
connective tissue cell | 1.05e-21 | 361 |
mesenchymal cell | 3.78e-21 | 354 |
macrophage dendritic cell progenitor | 1.90e-20 | 61 |
monopoietic cell | 2.97e-20 | 59 |
monocyte | 2.97e-20 | 59 |
monoblast | 2.97e-20 | 59 |
promonocyte | 2.97e-20 | 59 |
defensive cell | 7.37e-20 | 48 |
phagocyte | 7.37e-20 | 48 |
myeloid leukocyte | 4.87e-18 | 72 |
classical monocyte | 4.53e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.53e-17 | 42 |
muscle precursor cell | 4.86e-16 | 58 |
myoblast | 4.86e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.86e-16 | 58 |
motile cell | 6.61e-16 | 386 |
granulocyte monocyte progenitor cell | 2.74e-15 | 67 |
muscle cell | 6.83e-15 | 55 |
vascular associated smooth muscle cell | 8.82e-15 | 32 |
smooth muscle cell | 9.13e-15 | 43 |
smooth muscle myoblast | 9.13e-15 | 43 |
myeloid lineage restricted progenitor cell | 4.38e-14 | 66 |
fibroblast | 3.19e-12 | 76 |
electrically responsive cell | 1.21e-11 | 61 |
electrically active cell | 1.21e-11 | 61 |
leukocyte | 4.78e-09 | 136 |
nongranular leukocyte | 8.16e-09 | 115 |
mesodermal cell | 1.08e-08 | 121 |
skin fibroblast | 1.50e-07 | 23 |