FFCP PHASE1:Hg19::chr14:69726601..69726621,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:69726601..69726621,+ to FFCP PHASE1:Hg19::chr14:69726601..69726621,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57452 | |EntrezGene=57452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23233 | |HGNC=23233 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N428,Q68VJ8 | |UniProt=Q8N428,Q68VJ8 | ||
|association_with_transcript=-59bp_to_ENST00000337827,NM_001168368,NM_020692_5end | |||
|cluster_id=chr14:69726601..69726621,+ | |||
|description=CAGE_peak_6_at_GALNTL1_5end | |||
|id=chr14:69726601..69726621,+ | |||
|ontology_enrichment_celltype=CL:0000128!5.11e-07!7;CL:0000126!5.11e-07!7;CL:0000127!5.11e-07!7;CL:0002453!5.11e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002605;9.92e-13;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.41e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.16e-10;1!UBERON:0010226;5.78e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.78e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.00e-41!82;UBERON:0001049!3.11e-40!57;UBERON:0005068!3.11e-40!57;UBERON:0006241!3.11e-40!57;UBERON:0007135!3.11e-40!57;UBERON:0005743!2.30e-39!86;UBERON:0007023!2.87e-39!115;UBERON:0000073!5.56e-38!94;UBERON:0001016!5.56e-38!94;UBERON:0002616!1.98e-36!59;UBERON:0000955!4.86e-35!69;UBERON:0006238!4.86e-35!69;UBERON:0003075!6.55e-35!86;UBERON:0007284!6.55e-35!86;UBERON:0002346!5.71e-34!90;UBERON:0003080!2.02e-28!42;UBERON:0002780!3.94e-27!41;UBERON:0001890!3.94e-27!41;UBERON:0006240!3.94e-27!41;UBERON:0002020!1.80e-24!34;UBERON:0003528!1.80e-24!34;UBERON:0001869!3.55e-24!32;UBERON:0001893!4.73e-24!34;UBERON:0000033!2.69e-23!123;UBERON:0004121!4.79e-23!169;UBERON:0002791!5.54e-23!33;UBERON:0000924!6.75e-23!173;UBERON:0006601!6.75e-23!173;UBERON:0000153!3.01e-22!129;UBERON:0007811!3.01e-22!129;UBERON:0003056!3.52e-22!61;UBERON:0000956!1.27e-18!25;UBERON:0000203!1.27e-18!25;UBERON:0002619!2.67e-15!22;UBERON:0000025!5.60e-15!194;UBERON:0001950!2.00e-13!20;UBERON:0003076!9.38e-13!15;UBERON:0003057!9.38e-13!15;UBERON:0004111!1.48e-12!241;UBERON:0004733!9.39e-12!12;UBERON:0002028!9.39e-12!12;UBERON:0007277!9.39e-12!12;UBERON:0000477!1.43e-11!286;UBERON:0004732!1.31e-10!13;UBERON:0000483!2.74e-09!309;UBERON:0000475!3.08e-09!365;UBERON:0000119!5.42e-09!312;UBERON:0002680!1.10e-08!9;UBERON:0001895!1.10e-08!9;UBERON:0010092!1.10e-08!9;UBERON:0000200!1.38e-08!6;UBERON:0002298!2.06e-08!8;UBERON:0000064!8.48e-08!219;UBERON:0000481!8.65e-08!347;UBERON:0002308!2.77e-07!9;UBERON:0000125!2.77e-07!9;UBERON:0000062!5.16e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;5.78e-10;1!UBERON:0002135;5.78e-10;1!UBERON:0002082;5.78e-10;1!UBERON:0000956;3.16e-08;25!UBERON:0000203;3.16e-08;25!UBERON:0003528;3.49e-08;34!UBERON:0002020;3.49e-08;34!UBERON:0000955;1.10e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,7.55e-10,1;UBERON:0002082,7.55e-10,1;UBERON:0010226,7.55e-10,1;UBERON:0002135,8.99e-10,1;UBERON:0007023,6.84e-09,114;UBERON:0001017,7.22e-09,81;UBERON:0003075,7.72e-09,82;UBERON:0007284,7.72e-09,82;UBERON:0000955,1.02e-08,68;UBERON:0006238,1.02e-08,68;UBERON:0001049,1.27e-08,56;UBERON:0005068,1.27e-08,56;UBERON:0006241,1.27e-08,56;UBERON:0007135,1.27e-08,56;UBERON:0003528,2.21e-08,34;UBERON:0002020,2.21e-08,34;UBERON:0002346,2.31e-08,86;UBERON:0000956,4.26e-08,25;UBERON:0000203,4.26e-08,25;UBERON:0001016,7.50e-08,89;UBERON:0010314,2.49e-07,132;UBERON:0000073,4.70e-07,53;UBERON:0002616,4.70e-07,53;UBERON:0002780,6.67e-07,41;UBERON:0001890,6.67e-07,41;UBERON:0003080,6.67e-07,41;UBERON:0006240,6.67e-07,41 | |||
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| ||
|short_description=p6@GALNTL1 | |||
}} | }} |
Latest revision as of 17:55, 15 September 2015
Short description: | p6@GALNTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GALNTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000337827, NM_001168368, NM_020692_5end |
EntrezGene: | GALNTL1 |
HGNC: | 23233 |
UniProt: | Q8N428Q68VJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.41e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 7.55e-10 | 1 |
cardiac ventricle | 7.55e-10 | 1 |
future cardiac ventricle | 7.55e-10 | 1 |
mitral valve | 8.99e-10 | 1 |
adult organism | 6.84e-09 | 114 |
central nervous system | 7.22e-09 | 81 |
neural plate | 7.72e-09 | 82 |
presumptive neural plate | 7.72e-09 | 82 |
brain | 1.02e-08 | 68 |
future brain | 1.02e-08 | 68 |
neural tube | 1.27e-08 | 56 |
neural rod | 1.27e-08 | 56 |
future spinal cord | 1.27e-08 | 56 |
neural keel | 1.27e-08 | 56 |
brain grey matter | 2.21e-08 | 34 |
gray matter | 2.21e-08 | 34 |
neurectoderm | 2.31e-08 | 86 |
cerebral cortex | 4.26e-08 | 25 |
pallium | 4.26e-08 | 25 |
nervous system | 7.50e-08 | 89 |
structure with developmental contribution from neural crest | 2.49e-07 | 132 |
regional part of nervous system | 4.70e-07 | 53 |
regional part of brain | 4.70e-07 | 53 |
regional part of forebrain | 6.67e-07 | 41 |
forebrain | 6.67e-07 | 41 |
anterior neural tube | 6.67e-07 | 41 |
future forebrain | 6.67e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.33e-10 | 1 |