FFCP PHASE1:Hg19::chr14:76447439..76447452,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7043 | |EntrezGene=7043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11769 | |HGNC=11769 | ||
|TSSclassifier=strong | |||
|UniProt=P10600 | |UniProt=P10600 | ||
|association_with_transcript=81bp_to_ENST00000238682_5end | |||
|cluster_id=chr14:76447439..76447452,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_18_at_TGFB3_5end | |||
|id=chr14:76447439..76447452,- | |||
|ontology_enrichment_celltype=CL:0002253!4.70e-07!2;CL:0002570!9.36e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002327;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.56e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.37e-99;1!UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;5.56e-26;4!DOID:1612;5.56e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-12!115;UBERON:0000341!2.52e-07!2;UBERON:0005162!2.94e-07!2;UBERON:0000122!2.94e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0001911;5.56e-26;4!UBERON:0000010;2.45e-12;8!UBERON:0000310;2.73e-11;10!UBERON:0001443;2.16e-10;11!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0005085,5.04e-14,31;UBERON:0000076,9.39e-14,8;UBERON:0000010,2.45e-12,8;UBERON:0000310,2.73e-11,10;UBERON:0001443,2.16e-10,11;UBERON:0004732,5.70e-09,13 | |||
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| ||
|short_description=p18@TGFB3 | |||
}} | }} |
Latest revision as of 04:17, 16 September 2015
Short description: | p18@TGFB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_TGFB3_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 81bp_to_ENST00000238682_5end |
EntrezGene: | TGFB3 |
HGNC: | 11769 |
UniProt: | P10600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
ectodermal placode | 5.04e-14 | 31 |
external ectoderm | 9.39e-14 | 8 |
peripheral nervous system | 2.45e-12 | 8 |
breast | 2.73e-11 | 10 |
chest | 2.16e-10 | 11 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |