FFCP PHASE1:Hg19::chr16:30007387..30007420,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30007387..30007420,- to FFCP PHASE1:Hg19::chr16:30007387..30007420,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8479 | |EntrezGene=8479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4917 | |HGNC=4917 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BW71 | |UniProt=Q9BW71 | ||
|association_with_transcript=0bp_to_ENST00000279392,ENST00000352552,NM_001197323,NM_003609,uc002dve.2,uc002dvf.2_5end | |||
|cluster_id=chr16:30007387..30007420,- | |||
|description=CAGE_peak_2_at_HIRIP3_5end | |||
|id=chr16:30007387..30007420,- | |||
|ontology_enrichment_celltype=CL:0002319!1.84e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.65e-08;25!CL:0000095;7.64e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.81e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.14e-18!239;DOID:162!1.62e-17!235;DOID:0050686!1.91e-09!137;DOID:2531!3.55e-08!51;DOID:0060083!3.55e-08!51;DOID:0050687!5.87e-08!143;DOID:305!8.17e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.01e-18,239;DOID:162,1.58e-17,235;DOID:0050686,2.17e-09,137;DOID:2531,3.50e-08,51;DOID:0060083,3.50e-08,51;DOID:0050687,5.16e-08,143;DOID:305,8.07e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.32e-16!94;UBERON:0001016!1.32e-16!94;UBERON:0001017!1.89e-16!82;UBERON:0005743!8.05e-16!86;UBERON:0001049!3.18e-15!57;UBERON:0005068!3.18e-15!57;UBERON:0006241!3.18e-15!57;UBERON:0007135!3.18e-15!57;UBERON:0000955!1.19e-14!69;UBERON:0006238!1.19e-14!69;UBERON:0002780!8.36e-13!41;UBERON:0001890!8.36e-13!41;UBERON:0006240!8.36e-13!41;UBERON:0003080!1.26e-12!42;UBERON:0004121!1.85e-12!169;UBERON:0000924!2.32e-12!173;UBERON:0006601!2.32e-12!173;UBERON:0001893!1.03e-11!34;UBERON:0002791!1.65e-11!33;UBERON:0002020!2.19e-11!34;UBERON:0003528!2.19e-11!34;UBERON:0002616!3.85e-11!59;UBERON:0003075!4.92e-11!86;UBERON:0007284!4.92e-11!86;UBERON:0001869!7.46e-11!32;UBERON:0002346!8.97e-11!90;UBERON:0003056!4.14e-10!61;UBERON:0000153!2.11e-09!129;UBERON:0007811!2.11e-09!129;UBERON:0000956!3.80e-09!25;UBERON:0000203!3.80e-09!25;UBERON:0007023!6.29e-09!115;UBERON:0000033!8.83e-09!123;UBERON:0002619!1.45e-08!22;UBERON:0001950!2.28e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;2.49e-10;32!UBERON:0001893;2.74e-10;34!UBERON:0001869;4.33e-10;32!UBERON:0003528;5.02e-10;34!UBERON:0002020;5.02e-10;34!UBERON:0002780;7.43e-10;41!UBERON:0001890;7.43e-10;41!UBERON:0000956;3.16e-09;25!UBERON:0000203;3.16e-09;25!UBERON:0000073;3.99e-09;53!UBERON:0002616;3.99e-09;53!UBERON:0002619;1.32e-08;22!UBERON:0001950;2.53e-08;20!UBERON:0001016;2.47e-07;83!UBERON:0000955;2.68e-07;68!UBERON:0001017;8.25e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.69e-17,89;UBERON:0001017,1.48e-16,81;UBERON:0001049,2.15e-15,56;UBERON:0005068,2.15e-15,56;UBERON:0006241,2.15e-15,56;UBERON:0007135,2.15e-15,56;UBERON:0000955,9.13e-15,68;UBERON:0006238,9.13e-15,68;UBERON:0000073,1.25e-14,53;UBERON:0002616,1.25e-14,53;UBERON:0011216,1.32e-14,223;UBERON:0002780,8.14e-13,41;UBERON:0001890,8.14e-13,41;UBERON:0003080,8.14e-13,41;UBERON:0006240,8.14e-13,41;UBERON:0004121,3.16e-12,171;UBERON:0000924,3.16e-12,171;UBERON:0006601,3.16e-12,171;UBERON:0001893,1.01e-11,34;UBERON:0003075,1.31e-11,82;UBERON:0007284,1.31e-11,82;UBERON:0003528,2.14e-11,34;UBERON:0002020,2.14e-11,34;UBERON:0002346,2.59e-11,86;UBERON:0002791,3.16e-11,32;UBERON:0001869,7.29e-11,32;UBERON:0010371,2.82e-10,104;UBERON:0003056,1.18e-09,61;UBERON:0000956,3.73e-09,25;UBERON:0000203,3.73e-09,25;UBERON:0007023,1.07e-08,114;UBERON:0002619,1.42e-08,22;UBERON:0001950,2.24e-08,20 | |||
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| ||
|short_description=p2@HIRIP3 | |||
}} | }} |
Latest revision as of 05:23, 16 September 2015
Short description: | p2@HIRIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HIRIP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000279392, ENST00000352552, NM_001197323, NM_003609, uc002dve.2, uc002dvf.2_5end |
EntrezGene: | HIRIP3 |
HGNC: | 4917 |
UniProt: | Q9BW71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.81e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.69e-17 | 89 |
central nervous system | 1.48e-16 | 81 |
neural tube | 2.15e-15 | 56 |
neural rod | 2.15e-15 | 56 |
future spinal cord | 2.15e-15 | 56 |
neural keel | 2.15e-15 | 56 |
brain | 9.13e-15 | 68 |
future brain | 9.13e-15 | 68 |
regional part of nervous system | 1.25e-14 | 53 |
regional part of brain | 1.25e-14 | 53 |
organ system subdivision | 1.32e-14 | 223 |
regional part of forebrain | 8.14e-13 | 41 |
forebrain | 8.14e-13 | 41 |
anterior neural tube | 8.14e-13 | 41 |
future forebrain | 8.14e-13 | 41 |
ectoderm-derived structure | 3.16e-12 | 171 |
ectoderm | 3.16e-12 | 171 |
presumptive ectoderm | 3.16e-12 | 171 |
telencephalon | 1.01e-11 | 34 |
neural plate | 1.31e-11 | 82 |
presumptive neural plate | 1.31e-11 | 82 |
brain grey matter | 2.14e-11 | 34 |
gray matter | 2.14e-11 | 34 |
neurectoderm | 2.59e-11 | 86 |
regional part of telencephalon | 3.16e-11 | 32 |
cerebral hemisphere | 7.29e-11 | 32 |
ecto-epithelium | 2.82e-10 | 104 |
pre-chordal neural plate | 1.18e-09 | 61 |
cerebral cortex | 3.73e-09 | 25 |
pallium | 3.73e-09 | 25 |
adult organism | 1.07e-08 | 114 |
regional part of cerebral cortex | 1.42e-08 | 22 |
neocortex | 2.24e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.01e-18 | 239 |
cancer | 1.58e-17 | 235 |
organ system cancer | 2.17e-09 | 137 |
hematologic cancer | 3.50e-08 | 51 |
immune system cancer | 3.50e-08 | 51 |
cell type cancer | 5.16e-08 | 143 |
carcinoma | 8.07e-07 | 106 |