FFCP PHASE1:Hg19::chr17:19619886..19619902,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=146802 | |EntrezGene=146802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26439 | |HGNC=26439 | ||
|TSSclassifier=strong | |||
|UniProt=C9JAE6,G3V1A2 | |UniProt=C9JAE6,G3V1A2 | ||
|association_with_transcript=-7bp_to_ENST00000433844,ENST00000467609_5end | |||
|cluster_id=chr17:19619886..19619902,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_SLC47A2_5end | |||
|id=chr17:19619886..19619902,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.72e-13;1!CL:0000159;2.18e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.42e-13,1;CL:0000159,1.99e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.10e-13;1!UBERON:0007297;1.28e-07;2!UBERON:0010122;1.45e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;1.10e-13;1!DOID:3149;1.10e-13;1!DOID:3030;1.72e-13;1!DOID:3451;1.75e-07;2!DOID:4159;1.75e-07;2!DOID:0060122;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.25e-13,1;DOID:3149,1.25e-13,1;DOID:3030,1.42e-13,1;DOID:3451,1.87e-07,2;DOID:4159,1.87e-07,2;DOID:0060122,1.87e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.04e-35!86;UBERON:0001017!5.78e-35!82;UBERON:0001049!5.15e-32!57;UBERON:0005068!5.15e-32!57;UBERON:0006241!5.15e-32!57;UBERON:0007135!5.15e-32!57;UBERON:0000073!6.15e-31!94;UBERON:0001016!6.15e-31!94;UBERON:0000955!9.76e-31!69;UBERON:0006238!9.76e-31!69;UBERON:0003075!1.73e-27!86;UBERON:0007284!1.73e-27!86;UBERON:0002616!6.33e-26!59;UBERON:0002346!6.89e-26!90;UBERON:0000033!8.36e-22!123;UBERON:0007023!1.74e-20!115;UBERON:0000153!2.30e-20!129;UBERON:0007811!2.30e-20!129;UBERON:0004121!5.81e-20!169;UBERON:0002780!7.16e-20!41;UBERON:0001890!7.16e-20!41;UBERON:0006240!7.16e-20!41;UBERON:0003080!2.71e-19!42;UBERON:0000924!2.92e-19!173;UBERON:0006601!2.92e-19!173;UBERON:0003056!2.42e-18!61;UBERON:0002298!3.58e-18!8;UBERON:0002020!7.65e-17!34;UBERON:0003528!7.65e-17!34;UBERON:0002308!7.91e-16!9;UBERON:0000125!7.91e-16!9;UBERON:0002791!3.84e-15!33;UBERON:0003076!1.12e-14!15;UBERON:0003057!1.12e-14!15;UBERON:0001893!1.32e-14!34;UBERON:0002420!1.14e-11!9;UBERON:0007245!1.14e-11!9;UBERON:0010009!1.14e-11!9;UBERON:0010011!1.14e-11!9;UBERON:0000454!1.14e-11!9;UBERON:0004733!1.78e-11!12;UBERON:0002028!1.78e-11!12;UBERON:0007277!1.78e-11!12;UBERON:0001869!2.44e-11!32;UBERON:0009663!1.06e-10!7;UBERON:0001896!1.33e-10!3;UBERON:0005290!1.33e-10!3;UBERON:0010096!1.33e-10!3;UBERON:0004732!1.66e-10!13;UBERON:0006331!6.28e-10!3;UBERON:0000988!2.10e-09!3;UBERON:0002619!6.79e-08!22;UBERON:0000025!6.87e-08!194;UBERON:0000475!7.90e-08!365;UBERON:0000369!1.26e-07!4;UBERON:0002435!1.26e-07!4;UBERON:0000204!1.26e-07!4;UBERON:0010082!1.26e-07!4;UBERON:0001873!2.18e-07!2;UBERON:0010122!2.18e-07!2;UBERON:0001897!2.87e-07!2;UBERON:0002148!3.05e-07!2;UBERON:0009662!3.05e-07!2;UBERON:0001894!3.40e-07!7;UBERON:0006222!3.40e-07!7;UBERON:0001950!7.34e-07!20;UBERON:0000956!8.32e-07!25;UBERON:0000203!8.32e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;2.87e-38;3!UBERON:0005290;2.87e-38;3!UBERON:0002298;1.88e-33;6!UBERON:0004733;6.42e-17;12!UBERON:0002028;6.42e-17;12!UBERON:0004732;1.22e-15;13!UBERON:0002336;5.85e-14;1!UBERON:0001301;5.85e-14;1!UBERON:0011215;5.85e-14;1!UBERON:0001018;5.85e-14;1!UBERON:0002473;5.85e-14;1!UBERON:0005340;5.85e-14;1!UBERON:0003544;5.85e-14;1!UBERON:0005970;5.85e-14;1!UBERON:0002316;5.85e-14;1!UBERON:0001020;5.85e-14;1!UBERON:0002437;5.85e-14;1!UBERON:0000073;1.61e-09;53!UBERON:0002616;1.61e-09;53!UBERON:0001894;6.18e-08;7!UBERON:0005162;1.28e-07;2!UBERON:0000122;1.28e-07;2!UBERON:0001873;1.45e-07;2!UBERON:0001897;2.18e-07;2!UBERON:0002148;2.18e-07;2!UBERON:0006331;2.18e-07;2!UBERON:0009662;2.18e-07;2!UBERON:0010225;2.18e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,2.38e-38,3;UBERON:0005290,2.38e-38,3;UBERON:0010096,2.38e-38,3;UBERON:0002298,1.59e-33,6;UBERON:0004733,5.91e-17,12;UBERON:0002028,5.91e-17,12;UBERON:0007277,5.91e-17,12;UBERON:0004732,1.13e-15,13;UBERON:0002336,5.85e-14,1;UBERON:0011215,5.85e-14,1;UBERON:0001018,5.85e-14,1;UBERON:0002473,5.85e-14,1;UBERON:0005340,5.85e-14,1;UBERON:0003544,5.85e-14,1;UBERON:0005970,5.85e-14,1;UBERON:0002316,5.85e-14,1;UBERON:0001020,5.85e-14,1;UBERON:0002437,5.85e-14,1;UBERON:0000073,6.08e-14,53;UBERON:0002616,6.08e-14,53;UBERON:0001301,6.65e-14,1;UBERON:0003076,1.27e-13,15;UBERON:0003057,1.27e-13,15;UBERON:0001049,3.63e-13,56;UBERON:0005068,3.63e-13,56;UBERON:0006241,3.63e-13,56;UBERON:0007135,3.63e-13,56;UBERON:0000955,1.43e-10,68;UBERON:0006238,1.43e-10,68;UBERON:0007023,9.49e-10,114;UBERON:0001017,8.74e-09,81;UBERON:0003075,8.74e-09,82;UBERON:0007284,8.74e-09,82;UBERON:0002346,2.42e-08,86;UBERON:0001894,6.08e-08,7;UBERON:0006222,6.08e-08,7;UBERON:0001016,7.66e-08,89;UBERON:0005162,1.28e-07,2;UBERON:0000122,1.28e-07,2;UBERON:0001873,1.45e-07,2;UBERON:0010122,1.45e-07,2;UBERON:0002148,2.12e-07,2;UBERON:0006331,2.12e-07,2;UBERON:0009662,2.12e-07,2;UBERON:0001897,2.25e-07,2;UBERON:0010225,2.25e-07,2;UBERON:0010371,9.18e-07,104 | |||
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| ||
|short_description=p1@SLC47A2 | |||
}} | }} |
Latest revision as of 00:34, 19 September 2015
Short description: | p1@SLC47A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC47A2_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -7bp_to_ENST00000433844, ENST00000467609_5end |
EntrezGene: | SLC47A2 |
HGNC: | 26439 |
UniProt: | C9JAE6G3V1A2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.42e-13 | 1 |
seromucus secreting cell | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.25e-13 | 1 |
keratoacanthoma | 1.25e-13 | 1 |
mucinous adenocarcinoma | 1.42e-13 | 1 |
skin carcinoma | 1.87e-07 | 2 |
skin cancer | 1.87e-07 | 2 |
integumentary system cancer | 1.87e-07 | 2 |