FFCP PHASE1:Hg19::chr1:113161778..113161820,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:113161778..113161820,+ to FFCP PHASE1:Hg19::chr1:113161778..113161820,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=829 | |EntrezGene=829 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1488 | |HGNC=1488 | ||
|TSSclassifier=strong | |||
|UniProt=P52907 | |UniProt=P52907 | ||
|association_with_transcript=0bp_to_ENST00000263168_5end | |||
|cluster_id=chr1:113161778..113161820,+ | |||
|description=CAGE_peak_3_at_CAPZA1_5end | |||
|id=chr1:113161778..113161820,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.42e-14!180;CL:0000057!2.92e-11!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.11e-18!365;UBERON:0000468!2.41e-14!659;UBERON:0000467!2.89e-11!625;UBERON:0000480!5.37e-11!626;UBERON:0004121!7.09e-10!169;UBERON:0000924!8.88e-10!173;UBERON:0006601!8.88e-10!173;UBERON:0004111!1.30e-09!241;UBERON:0000477!1.80e-09!286;UBERON:0000119!2.33e-09!312;UBERON:0000481!2.70e-09!347;UBERON:0000033!3.61e-09!123;UBERON:0000483!6.50e-09!309;UBERON:0000073!1.05e-08!94;UBERON:0001016!1.05e-08!94;UBERON:0000153!2.11e-08!129;UBERON:0007811!2.11e-08!129;UBERON:0005743!3.52e-08!86;UBERON:0002050!6.94e-08!605;UBERON:0005423!6.94e-08!605;UBERON:0000923!7.97e-08!604;UBERON:0005291!7.97e-08!604;UBERON:0006598!7.97e-08!604;UBERON:0002532!7.97e-08!604;UBERON:0000922!8.12e-08!612;UBERON:0001017!8.73e-08!82;UBERON:0000955!1.34e-07!69;UBERON:0006238!1.34e-07!69;UBERON:0000062!1.73e-07!511;UBERON:0000025!2.31e-07!194;UBERON:0001049!2.44e-07!57;UBERON:0005068!2.44e-07!57;UBERON:0006241!2.44e-07!57;UBERON:0007135!2.44e-07!57;UBERON:0003075!2.73e-07!86;UBERON:0007284!2.73e-07!86;UBERON:0002346!4.08e-07!90;UBERON:0002616!7.73e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.25e-10,132;UBERON:0004121,5.00e-10,171;UBERON:0000924,5.00e-10,171;UBERON:0006601,5.00e-10,171;UBERON:0004111,5.09e-09,240;UBERON:0000119,1.88e-08,309;UBERON:0010371,4.64e-08,104;UBERON:0000483,5.05e-08,306;UBERON:0001016,7.03e-08,89;UBERON:0001017,1.76e-07,81;UBERON:0000955,2.16e-07,68;UBERON:0006238,2.16e-07,68;UBERON:0003075,2.58e-07,82;UBERON:0007284,2.58e-07,82;UBERON:0001049,3.16e-07,56;UBERON:0005068,3.16e-07,56;UBERON:0006241,3.16e-07,56;UBERON:0007135,3.16e-07,56;UBERON:0000073,3.45e-07,53;UBERON:0002616,3.45e-07,53;UBERON:0002346,4.45e-07,86;UBERON:0003102,8.71e-07,99 | |||
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| ||
|short_description=p3@CAPZA1 | |||
}} | }} |
Latest revision as of 04:40, 16 September 2015
Short description: | p3@CAPZA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAPZA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000263168_5end |
EntrezGene: | CAPZA1 |
HGNC: | 1488 |
UniProt: | P52907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.25e-10 | 132 |
ectoderm-derived structure | 5.00e-10 | 171 |
ectoderm | 5.00e-10 | 171 |
presumptive ectoderm | 5.00e-10 | 171 |
anatomical conduit | 5.09e-09 | 240 |
cell layer | 1.88e-08 | 309 |
ecto-epithelium | 4.64e-08 | 104 |
epithelium | 5.05e-08 | 306 |
nervous system | 7.03e-08 | 89 |
central nervous system | 1.76e-07 | 81 |
brain | 2.16e-07 | 68 |
future brain | 2.16e-07 | 68 |
neural plate | 2.58e-07 | 82 |
presumptive neural plate | 2.58e-07 | 82 |
neural tube | 3.16e-07 | 56 |
neural rod | 3.16e-07 | 56 |
future spinal cord | 3.16e-07 | 56 |
neural keel | 3.16e-07 | 56 |
regional part of nervous system | 3.45e-07 | 53 |
regional part of brain | 3.45e-07 | 53 |
neurectoderm | 4.45e-07 | 86 |
surface structure | 8.71e-07 | 99 |