FFCP PHASE1:Hg19::chr1:117452491..117452579,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:117452491..117452579,+ to FFCP PHASE1:Hg19::chr1:117452491..117452579,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5738 | |EntrezGene=5738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9601 | |HGNC=9601 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2B2 | |UniProt=Q9P2B2 | ||
|association_with_transcript=-99bp_to_ENST00000393203_5end | |||
|cluster_id=chr1:117452491..117452579,+ | |||
|description=CAGE_peak_1_at_PTGFRN_5end | |||
|id=chr1:117452491..117452579,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.52e-25!254;CL:0000220!8.74e-20!246;CL:0002321!1.41e-19!248;CL:0002076!2.05e-07!43;CL:0000076!3.13e-07!62;CL:0000223!5.16e-07!59;CL:0000222!5.82e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.26e-25,253;CL:0002321,5.28e-19,250;CL:0002076,8.54e-08,42;CL:0000223,2.60e-07,58;CL:0000076,7.91e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.07e-16!659;UBERON:0000467!9.26e-15!625;UBERON:0003914!1.90e-14!118;UBERON:0000481!2.00e-14!347;UBERON:0000480!2.02e-14!626;UBERON:0003103!3.70e-14!69;UBERON:0000922!5.55e-14!612;UBERON:0002050!1.07e-13!605;UBERON:0005423!1.07e-13!605;UBERON:0000923!2.53e-13!604;UBERON:0005291!2.53e-13!604;UBERON:0006598!2.53e-13!604;UBERON:0002532!2.53e-13!604;UBERON:0000483!2.11e-12!309;UBERON:0000119!3.00e-12!312;UBERON:0000477!6.88e-12!286;UBERON:0001048!2.41e-11!168;UBERON:0007100!3.72e-11!27;UBERON:0004111!5.29e-11!241;UBERON:0004872!7.33e-11!84;UBERON:0003104!8.41e-10!238;UBERON:0009142!8.41e-10!238;UBERON:0000948!9.46e-10!24;UBERON:0005498!9.46e-10!24;UBERON:0004140!9.46e-10!24;UBERON:0009881!9.46e-10!24;UBERON:0004141!9.46e-10!24;UBERON:0003084!9.46e-10!24;UBERON:0007005!9.46e-10!24;UBERON:0004139!9.46e-10!24;UBERON:0004291!9.46e-10!24;UBERON:0000475!4.84e-09!365;UBERON:0004119!1.12e-08!169;UBERON:0000925!1.12e-08!169;UBERON:0006595!1.12e-08!169;UBERON:0000025!1.67e-08!194;UBERON:0000466!3.52e-07!126;UBERON:0002100!4.33e-07!216;UBERON:0000064!6.95e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.16e-10;25!UBERON:0000948;2.94e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.90e-15,117;UBERON:0003103,7.58e-15,68;UBERON:0001048,5.63e-12,160;UBERON:0000483,9.84e-12,306;UBERON:0000119,1.39e-11,309;UBERON:0005423,3.01e-11,581;UBERON:0007100,3.07e-11,27;UBERON:0000922,8.74e-11,592;UBERON:0004111,9.15e-11,240;UBERON:0004872,1.51e-10,83;UBERON:0000948,8.03e-10,24;UBERON:0005498,8.03e-10,24;UBERON:0004140,8.03e-10,24;UBERON:0009881,8.03e-10,24;UBERON:0004141,8.03e-10,24;UBERON:0003084,8.03e-10,24;UBERON:0007005,8.03e-10,24;UBERON:0004139,8.03e-10,24;UBERON:0004291,8.03e-10,24;UBERON:0004119,2.47e-09,160;UBERON:0000925,2.47e-09,160;UBERON:0006595,2.47e-09,160;UBERON:0002050,5.12e-09,564;UBERON:0000025,1.43e-08,192;UBERON:0000923,6.79e-08,560;UBERON:0010316,6.79e-08,560;UBERON:0005291,6.79e-08,560;UBERON:0006598,6.79e-08,560;UBERON:0010317,6.79e-08,560;UBERON:0002532,6.79e-08,560;UBERON:0003104,1.98e-07,160;UBERON:0009142,1.98e-07,160;UBERON:0001007,3.70e-07,145;UBERON:0001555,3.70e-07,145;UBERON:0007026,3.70e-07,145 | |||
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| ||
|short_description=p1@PTGFRN | |||
}} | }} |
Latest revision as of 09:47, 16 September 2015
Short description: | p1@PTGFRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGFRN_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000393203_5end |
EntrezGene: | PTGFRN |
HGNC: | 9601 |
UniProt: | Q9P2B2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.26e-25 | 253 |
embryonic cell | 5.28e-19 | 250 |
endo-epithelial cell | 8.54e-08 | 42 |
endodermal cell | 2.60e-07 | 58 |
squamous epithelial cell | 7.91e-07 | 63 |