FFCP PHASE1:Hg19::chr1:154474247..154474267,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:154474247..154474267,- to FFCP PHASE1:Hg19::chr1:154474247..154474267,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=126669 | |EntrezGene=126669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27004 | |HGNC=27004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=321bp_to_uc001ffc.2_5end | |||
|cluster_id=chr1:154474247..154474267,- | |||
|description=CAGE_peak_2_at_SHE_5end | |||
|id=chr1:154474247..154474267,- | |||
|ontology_enrichment_celltype=CL:0000115!2.14e-25!35;CL:0002139!5.33e-24!24;CL:0002078!7.07e-19!44;CL:0000071!9.36e-18!18;CL:0002546!9.36e-18!18;CL:0000213!5.58e-12!57;CL:0000215!5.58e-12!57;CL:1000413!2.82e-10!9;CL:0005020!8.05e-08!6;CL:0002138!8.05e-08!6;CL:0005022!8.05e-08!6;CL:0002544!3.19e-07!6;CL:0002543!6.86e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;5.39e-30;36!CL:0002139;4.35e-28;24!CL:0000071;3.33e-18;18!CL:0002078;6.29e-18;45!CL:1000413;4.66e-13;9!CL:0002138;5.38e-12;6!CL:0000213;1.70e-10;58!CL:0000215;1.70e-10;58!CL:0002544;3.87e-08;6!CL:0002543;7.51e-08;6!CL:0002618;5.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.54e-35,36;CL:0002139,3.41e-28,24;CL:0002078,4.92e-26,45;CL:0000071,2.69e-18,18;CL:0002546,2.69e-18,18;CL:0000213,2.93e-18,58;CL:0000215,2.93e-18,58;CL:1000413,2.92e-13,9;CL:0005020,5.31e-12,6;CL:0002138,5.31e-12,6;CL:0005022,5.31e-12,6;CL:0002544,2.77e-08,6;CL:0002543,9.41e-08,6;CL:0002618,5.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.33e-18;18!CL:0005022;5.38e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.45e-64!115;UBERON:0000477!2.33e-23!286;UBERON:0004111!2.85e-22!241;UBERON:0000025!2.00e-18!194;UBERON:0001986!9.36e-18!18;UBERON:0004638!9.36e-18!18;UBERON:0004852!9.36e-18!18;UBERON:0001049!2.63e-17!57;UBERON:0005068!2.63e-17!57;UBERON:0006241!2.63e-17!57;UBERON:0007135!2.63e-17!57;UBERON:0002616!2.97e-14!59;UBERON:0003080!3.05e-14!42;UBERON:0002780!2.44e-13!41;UBERON:0001890!2.44e-13!41;UBERON:0006240!2.44e-13!41;UBERON:0000487!2.53e-13!22;UBERON:0000467!5.49e-13!625;UBERON:0000480!6.98e-13!626;UBERON:0003075!7.00e-13!86;UBERON:0007284!7.00e-13!86;UBERON:0000468!9.24e-13!659;UBERON:0006914!4.01e-12!25;UBERON:0000955!5.68e-12!69;UBERON:0006238!5.68e-12!69;UBERON:0002020!9.35e-12!34;UBERON:0003528!9.35e-12!34;UBERON:0002346!1.07e-11!90;UBERON:0001893!1.63e-11!34;UBERON:0001017!3.04e-11!82;UBERON:0002791!4.48e-11!33;UBERON:0005743!6.79e-11!86;UBERON:0001869!2.12e-10!32;UBERON:0003915!2.82e-10!9;UBERON:0004700!2.82e-10!9;UBERON:0001917!2.82e-10!9;UBERON:0000073!1.89e-09!94;UBERON:0001016!1.89e-09!94;UBERON:0001009!2.56e-09!113;UBERON:0000483!3.77e-09!309;UBERON:0000922!3.87e-09!612;UBERON:0002050!6.12e-09!605;UBERON:0005423!6.12e-09!605;UBERON:0000119!8.13e-09!312;UBERON:0000923!1.14e-08!604;UBERON:0005291!1.14e-08!604;UBERON:0006598!1.14e-08!604;UBERON:0002532!1.14e-08!604;UBERON:0000062!2.58e-08!511;UBERON:0004872!3.96e-08!84;UBERON:0000055!4.28e-08!69;UBERON:0002619!6.97e-08!22;UBERON:0002420!7.13e-08!9;UBERON:0007245!7.13e-08!9;UBERON:0010009!7.13e-08!9;UBERON:0010011!7.13e-08!9;UBERON:0000454!7.13e-08!9;UBERON:0002308!7.27e-08!9;UBERON:0000125!7.27e-08!9;UBERON:0004535!7.73e-08!110;UBERON:0003056!8.46e-08!61;UBERON:0002298!1.07e-07!8;UBERON:0000153!1.11e-07!129;UBERON:0007811!1.11e-07!129;UBERON:0002465!4.03e-07!10;UBERON:0003103!6.73e-07!69;UBERON:0001950!7.22e-07!20;UBERON:0000064!7.36e-07!219;UBERON:0000033!9.36e-07!123;UBERON:0007100!9.42e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.33e-18;18!UBERON:0001986;3.33e-18;18!UBERON:0004852;3.33e-18;18!UBERON:0000487;3.56e-14;22!UBERON:0003915;4.66e-13;9!UBERON:0004700;4.66e-13;9!UBERON:0001917;4.66e-13;9!UBERON:0006914;5.17e-12;25!UBERON:0007023;2.08e-09;114!UBERON:0002465;3.10e-09;10!UBERON:0001473;9.51e-09;8!UBERON:0004536;9.51e-09;8!UBERON:0006558;9.51e-09;8!UBERON:0007100;1.83e-08;25!UBERON:0002420;4.61e-08;9!UBERON:0000125;4.61e-08;9!UBERON:0007245;4.61e-08;9!UBERON:0002308;4.61e-08;9!UBERON:0010009;4.61e-08;9!UBERON:0010011;4.61e-08;9!UBERON:0000454;4.61e-08;9!UBERON:0009663;6.15e-08;7!UBERON:0000490;1.84e-07;33!UBERON:0004151;2.58e-07;3!UBERON:0001638;4.17e-07;9!UBERON:0003920;4.17e-07;9!UBERON:0004582;4.17e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-38,114;UBERON:0004638,2.69e-18,18;UBERON:0001986,2.69e-18,18;UBERON:0004852,2.69e-18,18;UBERON:0004111,8.73e-15,240;UBERON:0001009,2.17e-14,112;UBERON:0000487,3.01e-14,22;UBERON:0003915,2.92e-13,9;UBERON:0004700,2.92e-13,9;UBERON:0001917,2.92e-13,9;UBERON:0000025,1.26e-12,192;UBERON:0000055,3.91e-12,68;UBERON:0006914,4.47e-12,25;UBERON:0004535,6.24e-12,109;UBERON:0004872,3.34e-10,83;UBERON:0003914,4.81e-10,117;UBERON:0002049,1.16e-09,78;UBERON:0007798,1.16e-09,78;UBERON:0002465,3.07e-09,10;UBERON:0001473,9.41e-09,8;UBERON:0004536,9.41e-09,8;UBERON:0006558,9.41e-09,8;UBERON:0003887,1.60e-08,12;UBERON:0003103,3.54e-08,68;UBERON:0000125,5.46e-08,9;UBERON:0002308,5.46e-08,9;UBERON:0002420,6.81e-08,9;UBERON:0007245,6.81e-08,9;UBERON:0010009,6.81e-08,9;UBERON:0010011,6.81e-08,9;UBERON:0000454,6.81e-08,9;UBERON:0009663,7.23e-08,7;UBERON:0007500,8.80e-08,59;UBERON:0001981,8.80e-08,59;UBERON:0004537,8.80e-08,59;UBERON:0006965,8.80e-08,59;UBERON:0007100,1.13e-07,27;UBERON:0004151,2.50e-07,3;UBERON:0004876,2.83e-07,11;UBERON:0001638,4.43e-07,9;UBERON:0003920,4.43e-07,9;UBERON:0004582,4.43e-07,9;UBERON:0000483,4.71e-07,306;UBERON:0000119,7.49e-07,309;UBERON:0000080,9.77e-07,9;UBERON:0002120,9.77e-07,9;UBERON:0004875,9.77e-07,9;UBERON:0005721,9.77e-07,9;UBERON:0005754,9.77e-07,9;UBERON:0007297,9.77e-07,9 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68698569087909,1.29557466407592,5.6666624879521,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0,1.76821751921912,0,0,0.324547393654683,0,0.132957960518865,0,0,0,3.18019851786728,2.58070378531837,1.73570250803797,3.95715559346807,3.35599548967925,3.85165258716094,2.50793959844173,1.8089173141853,2.13459757612026,3.01248551488203,0.805658634218294,0.760272105718513,4.63717909341522,7.35326160691737,0.81014194788176,3.03619076165871,4.4905874525234,4.72968218029953,1.53316637465883,0.949265659568129,1.09921046358244,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,1.21239604862719,1.9615428373615,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591534000199219,0.505754070234305,0.723033089650446,0.441175890929576,0.217879444092406,0,0.269662616320329,0.588664395376038,0,1.4763109092493,0,0,0,2.53510069643662,2.94848165003288,3.54473944008842,0,0,0,0,0,0,0,0,0,0,0,0,9.09508620894765,5.09284063834272,10.8444866773721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,3.40187410553031,1.51141141271498,1.54227252690289,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0,0,0,4.10222901961303,0,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0,0,2.39097585901284,0.828851746593443,0,0,0,0,0,0,0,2.66337195219721,0,0,1.93866549219044,1.20598527610407,0,0,0,12.3249927823915,0,0,0.236387681767936,1.03423011972439,0,0,1.77148277162768,1.4471572635049,0,0.221158519862449,0.295547618953547,0.87754158861589,0,0.557694977114413,2.00070672109872,0,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.0345239835768,0,3.55825354416746,5.56037725259263,6.7874267178546,0.67401132980677,2.40773294189637,0.468528891450678,0,0,0,0.789168805698781,0,0,8.84612114798832,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.27144668714639,0,0,0,0,1.64881328030313,0,1.12990370390266,0,0,0.316553979779393,0,0,0.85381197895741,0.599428828746391,0,0,0,0,0.372757606696298,0.471388069233591,0,0,0,0,1.20084057741958,1.36905378891993,0,0,0,4.18923601908381,1.14580212005842,18.6646986389972,2.79550600698588,5.15071257763885,5.57928643604681,1.5452198671947,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0.2249738915515,0.77380195455795,0.850493793212345,0,1.89133697518076,1.25891011523995,0,0,0,4.2881719582402,5.95882773328889,0,0,0,0,0,0,0,0,1.90517903781507,0,0.775697738169303,1.3223260174269,0,0,7.47511887973863,2.20086027139532,7.04206394090232,4.46549419630756,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.610131324509816,0.876336514945499,1.14681839138014,1.77486482458964,1.30402446176905,0,0,0,0,0,1.87333962322753,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0.265729680626726,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,1.11743701340006,0.41023272848151,0,0.484100767249525,0.807378228159255,2.85538840518309,0,0,0,0.115525666150338,0,0,0,2.40673050717623,0,0.781514011233092,0,0,0,0.405225507710368,0.781078098613847,0.413373593002368,0.507326481551255,0,0.548257766857182,2.48105589194647,0,0,0.535701835878287,2.01770233331294,0,1.13831095675649,0.620916591138472,0,0,0.883606528698812,0.263091094251396,0,0,2.35479278551542,1.57115589916002,0,1.82631744101899,0,0,1.28657779517981,0,0,0,0,0.207216164163037,0.51215543128185,0.691259661814092,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,3.23714418593947,2.25858175083743,0,0.971421986118279,0,0.198950775161368,0,0,0,0,1.15761237161917,1.31135736302374,0,0.490296643507811,0,0.785233868459781,0.891139200981258,0,0,5.2630994068718,1.28915775947154,0,0,0,0,1.46067277649303,0,1.00337708206016,0,0.203974470572744,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0.250707539292375,1.81868875723775,0.267964130156178,0,1.13776295448085,2.13233981900981,0.714193294391221,0.322944549180031,0.620747142958579,0,10.3108396410627,1.41482032270754,1.30630048738177,0.342233301085281,0.875576689189638,1.50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| ||
|short_description=p2@SHE | |||
}} | }} |
Latest revision as of 09:27, 17 September 2015
Short description: | p2@SHE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHE_5end |
Coexpression cluster: | NA |
Association with transcript: | 321bp_to_uc001ffc.2_5end |
EntrezGene: | SHE |
HGNC: | 27004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.54e-35 | 36 |
endothelial cell of vascular tree | 3.41e-28 | 24 |
meso-epithelial cell | 4.92e-26 | 45 |
blood vessel endothelial cell | 2.69e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.69e-18 | 18 |
lining cell | 2.93e-18 | 58 |
barrier cell | 2.93e-18 | 58 |
endothelial cell of artery | 2.92e-13 | 9 |
lymphangioblast | 5.31e-12 | 6 |
endothelial cell of lymphatic vessel | 5.31e-12 | 6 |
vascular lymphangioblast | 5.31e-12 | 6 |
aortic endothelial cell | 2.77e-08 | 6 |
vein endothelial cell | 9.41e-08 | 6 |
endothelial cell of umbilical vein | 5.43e-07 | 3 |