FFCP PHASE1:Hg19::chr1:196621002..196621021,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:196621002..196621021,+ to FFCP PHASE1:Hg19::chr1:196621002..196621021,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3075 | |EntrezGene=3075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4883 | |HGNC=4883 | ||
|TSSclassifier=strong | |||
|UniProt=P08603,C9JYL1,F8WDX4 | |UniProt=P08603,C9JYL1,F8WDX4 | ||
|association_with_transcript=0bp_to_ENST00000367429,ENST00000391986,ENST00000439155,NM_000186,NM_001014975,uc001gti.3,uc001gtj.3,uc009wyw.2,uc009wyx.2_5end | |||
|cluster_id=chr1:196621002..196621021,+ | |||
|coexpression_cluster_id=C2432 | |||
|description=CAGE_peak_2_at_CFH_5end | |||
|id=chr1:196621002..196621021,+ | |||
|ontology_enrichment_celltype=CL:0002494!6.96e-13!16;CL:0000359!1.48e-12!32;CL:0000192!2.82e-10!42;CL:0000514!2.82e-10!42;CL:0000680!4.12e-10!57;CL:0000056!4.12e-10!57;CL:0000355!4.12e-10!57;CL:0000187!1.08e-09!54;CL:0000183!2.67e-09!59;CL:0002539!2.84e-08!10;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.79e-17;32!CL:0002494;3.44e-14;16!CL:0002539;8.27e-14;10!CL:0000192;6.36e-10;43!CL:0000136;2.32e-07;13!CL:0002595;6.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,8.74e-18,32;CL:0002539,5.02e-14,10;CL:0002494,9.78e-14,16;CL:0000192,1.03e-11,43;CL:0000514,1.03e-11,43;CL:0000680,1.70e-11,58;CL:0000056,1.70e-11,58;CL:0000355,1.70e-11,58;CL:0000187,2.22e-11,55;CL:0000393,1.25e-09,61;CL:0000211,1.25e-09,61;CL:0002595,7.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;6.36e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.64e-26!115;UBERON:0000025!3.88e-23!194;UBERON:0000477!6.02e-22!286;UBERON:0004111!3.14e-21!241;UBERON:0007100!1.49e-18!27;UBERON:0000119!8.32e-18!312;UBERON:0004872!2.20e-17!84;UBERON:0000483!5.31e-17!309;UBERON:0000948!6.63e-17!24;UBERON:0005498!6.63e-17!24;UBERON:0004140!6.63e-17!24;UBERON:0009881!6.63e-17!24;UBERON:0004141!6.63e-17!24;UBERON:0003084!6.63e-17!24;UBERON:0007005!6.63e-17!24;UBERON:0004139!6.63e-17!24;UBERON:0004291!6.63e-17!24;UBERON:0000481!8.58e-16!347;UBERON:0001009!4.51e-14!113;UBERON:0002616!8.82e-14!59;UBERON:0003914!1.38e-13!118;UBERON:0004535!7.64e-13!110;UBERON:0001049!1.78e-12!57;UBERON:0005068!1.78e-12!57;UBERON:0006241!1.78e-12!57;UBERON:0007135!1.78e-12!57;UBERON:0000475!3.68e-12!365;UBERON:0003075!4.72e-12!86;UBERON:0007284!4.72e-12!86;UBERON:0001637!1.22e-11!42;UBERON:0003509!1.22e-11!42;UBERON:0004572!1.22e-11!42;UBERON:0002385!2.54e-11!63;UBERON:0001015!2.54e-11!63;UBERON:0000383!2.54e-11!63;UBERON:0004573!3.26e-11!33;UBERON:0004571!3.26e-11!33;UBERON:0002346!7.82e-11!90;UBERON:0005743!2.04e-10!86;UBERON:0001134!2.14e-10!61;UBERON:0002036!2.14e-10!61;UBERON:0003082!2.14e-10!61;UBERON:0000955!2.33e-10!69;UBERON:0006238!2.33e-10!69;UBERON:0001017!2.71e-10!82;UBERON:0000073!2.92e-10!94;UBERON:0001016!2.92e-10!94;UBERON:0000468!7.92e-10!659;UBERON:0002049!8.68e-10!79;UBERON:0007798!8.68e-10!79;UBERON:0003080!2.47e-09!42;UBERON:0001981!3.47e-09!60;UBERON:0007500!3.47e-09!60;UBERON:0004537!3.47e-09!60;UBERON:0006965!3.47e-09!60;UBERON:0000467!6.24e-09!625;UBERON:0000480!7.90e-09!626;UBERON:0002780!8.76e-09!41;UBERON:0001890!8.76e-09!41;UBERON:0006240!8.76e-09!41;UBERON:0003103!1.99e-08!69;UBERON:0004237!2.84e-08!10;UBERON:0004695!2.84e-08!10;UBERON:0002111!2.84e-08!10;UBERON:0004178!2.84e-08!10;UBERON:0000922!4.38e-08!612;UBERON:0000923!4.49e-08!604;UBERON:0005291!4.49e-08!604;UBERON:0006598!4.49e-08!604;UBERON:0002532!4.49e-08!604;UBERON:0002050!5.62e-08!605;UBERON:0005423!5.62e-08!605;UBERON:0000055!9.33e-08!69;UBERON:0001135!1.01e-07!15;UBERON:0004290!1.31e-07!70;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0002020!1.56e-07!34;UBERON:0003528!1.56e-07!34;UBERON:0000490!1.80e-07!138;UBERON:0001893!2.43e-07!34;UBERON:0002791!4.72e-07!33;UBERON:0000033!5.60e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.01e-17;22!UBERON:0007100;3.71e-17;25!UBERON:0004573;1.19e-15;33!UBERON:0004571;1.19e-15;33!UBERON:0004237;8.27e-14;10!UBERON:0004695;8.27e-14;10!UBERON:0002111;8.27e-14;10!UBERON:0004178;8.27e-14;10!UBERON:0001637;1.79e-12;42!UBERON:0003509;1.79e-12;42!UBERON:0004572;1.79e-12;42!UBERON:0001135;2.50e-10;15!UBERON:0000947;3.47e-10;21!UBERON:0010191;3.47e-10;21!UBERON:0005284;2.54e-08;5!UBERON:0003834;6.83e-07;5!UBERON:0001533;6.83e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.12e-19,83;UBERON:0000948,9.47e-18,24;UBERON:0005498,9.47e-18,24;UBERON:0004140,9.47e-18,24;UBERON:0009881,9.47e-18,24;UBERON:0004141,9.47e-18,24;UBERON:0003084,9.47e-18,24;UBERON:0007005,9.47e-18,24;UBERON:0004139,9.47e-18,24;UBERON:0004291,9.47e-18,24;UBERON:0004573,1.66e-17,33;UBERON:0004571,1.66e-17,33;UBERON:0007100,2.84e-17,27;UBERON:0001009,1.47e-16,112;UBERON:0004535,2.94e-16,109;UBERON:0001637,1.53e-15,42;UBERON:0003509,1.53e-15,42;UBERON:0004572,1.53e-15,42;UBERON:0003914,4.16e-15,117;UBERON:0000025,4.31e-15,192;UBERON:0004237,5.02e-14,10;UBERON:0004695,5.02e-14,10;UBERON:0002111,5.02e-14,10;UBERON:0004178,5.02e-14,10;UBERON:0002385,6.49e-13,64;UBERON:0001015,6.49e-13,64;UBERON:0000383,6.49e-13,64;UBERON:0001134,2.00e-12,62;UBERON:0002036,2.00e-12,62;UBERON:0003082,2.00e-12,62;UBERON:0004111,4.10e-12,240;UBERON:0007500,1.25e-11,59;UBERON:0001981,1.25e-11,59;UBERON:0004537,1.25e-11,59;UBERON:0006965,1.25e-11,59;UBERON:0002049,1.35e-11,78;UBERON:0007798,1.35e-11,78;UBERON:0010314,8.33e-11,132;UBERON:0007023,1.07e-10,114;UBERON:0003103,1.42e-10,68;UBERON:0001135,1.50e-10,15;UBERON:0000947,3.36e-10,21;UBERON:0010191,3.36e-10,21;UBERON:0002329,6.23e-10,71;UBERON:0003059,6.23e-10,71;UBERON:0007282,6.23e-10,71;UBERON:0004290,6.23e-10,71;UBERON:0009618,6.23e-10,71;UBERON:0003077,1.07e-09,72;UBERON:0007285,1.07e-09,72;UBERON:0007524,1.82e-09,73;UBERON:0005256,2.21e-09,122;UBERON:0000483,2.28e-09,306;UBERON:0000055,3.38e-09,68;UBERON:0000119,4.08e-09,309;UBERON:0005284,1.99e-08,5;UBERON:0007503,2.02e-08,78;UBERON:0002100,1.10e-07,199;UBERON:0000486,1.63e-07,83;UBERON:0003834,7.23e-07,5;UBERON:0001533,7.23e-07,5;UBERON:0004797,9.44e-07,7 | |||
|phase1_expression=3.27021082687002,1.07050261945492,4.65149533516705,2.00146596706261,0.893922188854576,5.23403114460221,0,0,0.261185628199839,0,0,0,0,0,0,2.6893005858071,3.61616716814386,5.11217063271161,2.43966399395253,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.1329612839546,1.34140171940727,6.13740296848946,0,0,0.724232594804119,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,1.01304409331664,4.76673050927588,8.03142538096678,0.354668382198357,0.560677600142307,1.06748995729705,0.49333509683432,4.35695449559673,8.62148301246004,3.10577615915572,1.96764655938411,3.45705554687999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,8.28054937068154,0,0,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.646584227275248,0,0,0,0.57978255948989,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0.404493924480493,0,0,0,0,0.4115740113314,0,5.07020139287323,0.982827216677626,1.18157981336281,0,0,0.514703430895577,0,0,0,0,0,0,0,0,1.05667824812239,0.433099343283221,0,0.570762456703795,0,0,0,0,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.387815147273333,0,0,0,0,0,0,0,1.42977993658148,0,0,0,1.42156779497018,0,1.50719688529793,1.74306691720059,1.09970290300263,0,0,0,0.479249710983165,0,0,0.289562613335158,0,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,2.4538298343828,0,0,0,0.178428988797162,0,0.35142424497814,0,0,0,0,0.184369168541703,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0,0,0,1.24053903909388,1.2276957863045,0,2.69092213436972,0,0.482561763430822,2.96836132889982,0.154209693802656,0.355123450626254,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,2.06082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,2.83331112147576,3.485186350803,4.31247012246524,1.59691809095107,2.60979897622522,3.52116016297448,1.71749864090389,2.60510858551767,1.2655176988749,1.14378116354295,0.255897791311334,0,0,0,0,0,0.117812402345686,1.01091240786658,4.75530963519025,0.842516912477962,0,6.82397770967596,3.16950440270266,0,0.141405431953713,0,0,7.96126770289464,4.38450885253763,0,0,0.405820753925408,0,0,0,0.0982490410131212,0.7133421029625,0.354761064070598,0.211107635297664,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0.844016498463076,0.779160935160341,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,3.05794557474494,0,0,0,1.11321717794222,0,0,0,1.44999915086959,0,0,0,0,0,0,0,1.20596438625408,0,0.884634079449797,0,1.31631238292384,0,0,0.384751292518985,0.797594390929008,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,1.22206028986725,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,2.52746318513952,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,1.20390222730132,1.35458863804719,1.60796497589608,2.21711734043665,1.84279131327997,0,2.71176888936639,0,0,0.253243183823515,0,0.0801588202515337,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,2.46429682005587,0,0.429765441419957,0,3.90995361781156,0.458320848023367,10.7680953686522,0.599037001496973,0.429226048136571,2.4548860318606,1.07493555978762,0.360299883542404,0,0,0,0,0.0984274815147488,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.157363764404994,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,0.879313402068495,1.32506888912221,0.258565912723101,1.19009341568421,0,0,0.854299300541557,2.67247318669432,0.414239055347196,1.9846640872478,0,0,0,1.08803560673895,1.2534494701135,1.22538230705385,0.327872630709804,0,0.886068179966986,0,1.1267183763585,1.14681839138014,1.44207766997908,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,2.51724075236616,0.151230923763239,1.08806040407946,3.10495814978231,2.23015474029183,1.34940933649081,1.39736661188633,0.414706207840855,0,0,0.901545653983311,3.04644169735036,2.03435366602331,1.27294061441792,0.429642228169954,0.928067519756987,0.796191777397232,0.400027764663154,0,0,0,0,4.07439023612359,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0.303859956177382,1.7973596699725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,1.11743701340006,0.41023272848151,0.252071696221718,0.0691572524642179,0.161475645631851,5.71077681036618,0,0,0,0,0,0,0,3.98614740251063,0,0,0,0,0,0.270150338473579,0,1.2401207790071,0.253663240775627,0.546974809018219,0,3.96968942711435,0,0,0,3.36283722218824,3.64179362541979,0.227662191351298,0.0887023701626388,0,0.1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| ||
|short_description=p2@CFH | |||
}} | }} |
Latest revision as of 12:24, 19 September 2015
Short description: | p2@CFH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CFH_5end |
Coexpression cluster: | C2432_Cardiac_Hepatocyte_Fibroblast_lung_heart_adipose_liver |
Association with transcript: | 0bp_to_ENST00000367429, ENST00000391986, ENST00000439155, NM_000186, NM_001014975, uc001gti.3, uc001gtj.3, uc009wyw.2, uc009wyx.2_5end |
EntrezGene: | CFH |
HGNC: | 4883 |
UniProt: | P08603C9JYL1F8WDX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 8.74e-18 | 32 |
aortic smooth muscle cell | 5.02e-14 | 10 |
cardiocyte | 9.78e-14 | 16 |
smooth muscle cell | 1.03e-11 | 43 |
smooth muscle myoblast | 1.03e-11 | 43 |
muscle precursor cell | 1.70e-11 | 58 |
myoblast | 1.70e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.70e-11 | 58 |
muscle cell | 2.22e-11 | 55 |
electrically responsive cell | 1.25e-09 | 61 |
electrically active cell | 1.25e-09 | 61 |
smooth muscle cell of the subclavian artery | 7.23e-07 | 5 |