FFCP PHASE1:Hg19::chr1:6086424..6086442,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:6086424..6086442,+ to FFCP PHASE1:Hg19::chr1:6086424..6086442,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8514 | |EntrezGene=8514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6229 | |HGNC=6229 | ||
|TSSclassifier=strong | |||
|UniProt=Q13303,E7ESI4,Q2YD85,B0AZR7 | |UniProt=Q13303,E7ESI4,Q2YD85,B0AZR7 | ||
|association_with_transcript=44bp_to_ENST00000341524,ENST00000352527,ENST00000378087,uc001alu.2,uc001alv.1,uc001alw.1_5end | |||
|cluster_id=chr1:6086424..6086442,+ | |||
|coexpression_cluster_id=C2595 | |||
|description=CAGE_peak_3_at_KCNAB2_5end | |||
|id=chr1:6086424..6086442,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.57e-72!172;CL:0000566!4.57e-72!172;CL:0000988!3.70e-68!182;CL:0002032!7.69e-68!165;CL:0000837!7.69e-68!165;CL:0000738!2.06e-67!140;CL:0002031!2.26e-58!124;CL:0002087!2.53e-57!119;CL:0000763!8.86e-44!112;CL:0000049!8.86e-44!112;CL:0000766!5.91e-41!76;CL:0000557!8.63e-38!71;CL:0000839!1.53e-36!70;CL:0002009!1.94e-34!65;CL:0002194!3.82e-34!63;CL:0000576!3.82e-34!63;CL:0000040!3.82e-34!63;CL:0000559!3.82e-34!63;CL:0000860!2.14e-26!45;CL:0002057!2.73e-26!42;CL:0000542!3.50e-20!53;CL:0000051!3.50e-20!53;CL:0000838!9.22e-20!52;CL:0000084!8.37e-13!25;CL:0000827!8.37e-13!25;CL:0000791!2.15e-10!18;CL:0000789!2.15e-10!18;CL:0002420!2.15e-10!18;CL:0002419!2.15e-10!18;CL:0000790!2.15e-10!18;CL:0000134!5.30e-10!358;CL:0000219!3.58e-09!390;CL:0002320!6.36e-09!365;CL:0000625!2.08e-07!11;CL:0000945!4.46e-07!24;CL:0000826!4.46e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.12e-24;39!CL:0000234;1.12e-24;39!CL:0000860;1.24e-24;33!CL:0002057;1.24e-24;33!CL:0000576;2.35e-22;48!CL:0000766;2.50e-20;69!CL:0002087;5.64e-18;104!CL:0000738;8.56e-17;136!CL:0000763;9.14e-16;100!CL:0000084;8.20e-15;25!CL:0000988;1.13e-13;177!CL:0000542;1.55e-13;53!CL:0000791;5.36e-12;18!CL:0000789;5.36e-12;18!CL:0002419;5.36e-12;18!CL:0000625;1.83e-08;11!CL:0000945;5.57e-08;24!CL:0000219;8.24e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.39e-87,168;CL:0000988,1.08e-82,177;CL:0002032,7.76e-82,161;CL:0000837,7.76e-82,161;CL:0000738,1.82e-80,136;CL:0002031,8.91e-70,120;CL:0002087,1.38e-68,115;CL:0000763,2.32e-53,108;CL:0000049,2.32e-53,108;CL:0000766,1.59e-49,72;CL:0000557,9.08e-46,67;CL:0000839,2.97e-44,66;CL:0002009,8.29e-42,61;CL:0002194,1.65e-41,59;CL:0000576,1.65e-41,59;CL:0000040,1.65e-41,59;CL:0000559,1.65e-41,59;CL:0000473,9.24e-36,48;CL:0000234,9.24e-36,48;CL:0000860,7.96e-31,42;CL:0002057,7.96e-31,42;CL:0000542,1.36e-23,53;CL:0000051,1.36e-23,53;CL:0000838,4.30e-23,52;CL:0000134,2.87e-15,354;CL:0000084,7.41e-15,25;CL:0000827,7.41e-15,25;CL:0002320,5.43e-14,361;CL:0000219,6.66e-14,386;CL:0000791,5.24e-12,18;CL:0000789,5.24e-12,18;CL:0002420,5.24e-12,18;CL:0002419,5.24e-12,18;CL:0000790,5.24e-12,18;CL:0000625,1.76e-08,11;CL:0000945,4.33e-08,24;CL:0000826,4.33e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-22;42!CL:0000049;1.03e-14;108!CL:0000051;1.55e-13;53!CL:0000790;5.36e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!2.22e-10!51;DOID:0060083!2.22e-10!51;DOID:1240!5.52e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;4.13e-08;51!DOID:0060083;4.13e-08;51!DOID:1240;5.67e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.79e-13,51;DOID:0060083,7.79e-13,51;DOID:1240,7.49e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.22e-41!102;UBERON:0003061!1.22e-41!102;UBERON:0002193!5.33e-36!112;UBERON:0002371!3.34e-32!80;UBERON:0001474!3.57e-27!86;UBERON:0002405!2.28e-24!115;UBERON:0004765!1.24e-18!101;UBERON:0001434!1.24e-18!101;UBERON:0002384!3.24e-08!375;UBERON:0000178!4.31e-07!15;UBERON:0000179!4.31e-07!15;UBERON:0000463!4.31e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.37e-08;15!UBERON:0000179;4.37e-08;15!UBERON:0000463;4.37e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.64e-50,98;UBERON:0003061,1.64e-50,98;UBERON:0002193,2.60e-44,108;UBERON:0002371,2.36e-39,76;UBERON:0002405,1.11e-36,93;UBERON:0001474,3.93e-34,82;UBERON:0004765,2.40e-28,90;UBERON:0001434,1.47e-22,100;UBERON:0002384,1.96e-13,371;UBERON:0003081,9.45e-11,203;UBERON:0000178,4.16e-08,15;UBERON:0000179,4.16e-08,15;UBERON:0000463,4.16e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09982100928283,8.37426012389447,7.39881344348585,29.5023207636678,59.493556705068,45.3611241316103,0,0,0,10.4580720783407,11.2313693665063,38.7552579921998,32.6857291033808,22.8620670115962,26.6923370980498,83.5204718914918,100.407036465884,79.8484259665978,74.0077035387984,72.5521811882514,60.4034312357662,69.263852997894,70.720876739754,58.8442104700697,73.6492524344705,78.6413369044339,66.2150243688039,82.0494720153152,67.7758917763017,69.0675081631143,82.4501447196609,75.0491912659076,66.7428748801901,76.5209730927256,95.6368500686759,69.0484095862965,74.5463938421978,83.3758088858421,64.3599373304368,60.9439401120026,45.3908179752912,33.632401445761,76.6308429033067,76.1365060893494,79.0567394726625,42.3779651843358,79.1796917373264,58.2290792891227,18.3792099091389,23.1738686961897,16.9823502861784,27.9698291554773,33.4894471036559,22.8230333109854,9.12040779971995,9.74691718275542,8.03722276564389,1.75996244461323,4.91524750135918,3.55803701545422,7.68114400619713,3.60356388332411,3.4485146397269,1.98313461835459,2.86216126360609,8.53819453664173,12.3319809767897,8.79228424688026,25.1125524300149,31.9489880899476,25.0214880536323,14.3598132183098,15.7204305099666,18.7097364089553,25.9139067855551,21.510869597817,18.4644644236546,17.534405556712,39.2164808235811,24.4522903204115,19.9380505125259,28.4344056953266,17.9327847615945,14.956824969386,23.5146203583257,22.3843514406537,60.858648004361,33.2161901483015,23.8111336999845,20.9071047609954,69.1186990455154,44.8367977514248,23.3666662928188,26.8200873540673,28.9894527034928,33.8563396005338,24.7117531556577,35.0840027451211,45.9471934044362,33.7312961691334,39.0682465872628,50.0888078121838,40.3213486449465,34.2323450602889,25.7787438911382,0,0,0,0,0,0,0,0,0,0,0.263504357079378,3.40545596294053,0,0.370784442784429,29.8583602162309,27.6866282305835,27.655255787924,39.8279342589921,30.3157302713468,41.2317826475817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.8519294051796,34.9002237733493,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.561803226808994,0,1.35117749042945,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0,0.710019185033229,0,0,0,0,0,0,0,0.348581828608555,0,0.252320850875628,0,21.9029345261742,18.6539872075937,13.8134921352481,1.39310378409594,0,4.73227200159376,5.56329477257736,5.06123162755312,5.29411069115491,4.35758888184812,5.45722423955522,4.04493924480493,5.101758093259,3.07797725557112,0,0,0,0,0,0.982827216677626,0.590789906681404,3.97316789473185,3.32068784066407,0,0,0,0.502644862058154,0.0925884451585296,1.62904152655162,0,0,0,0,0,0,0.190254152234598,0,0,77.3121399114428,48.4388828838222,41.1708319539777,0,0,0,0,0,0,9.36060152002293,20.3391882570552,40.8436387615321,31.7063897517315,51.6331552713894,198.748409134489,291.075180275408,424.32715890037,206.997659687473,98.3030830243773,116.833449501284,226.088708210787,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,171.489530704079,107.483017566475,59.0335030552489,0,0,0,0.144781306667579,0,0.179060963239896,32.3926066141294,47.6814439688664,30.834743204911,33.1125033601751,0,0,0,0.670065061337395,0,14.9801404789436,14.9580729602012,12.8468809165171,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,28.3272195788356,24.8071330941409,25.0809760838094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,1.53481913652154,1.0457418040996,9.4886546293064,4.26419039409617,11.3882438132506,4.12164046590889,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,2.478587984798,0,0,0,0,0,0.422215270595328,0,0.379473173765715,0,0,0.670302275535787,0,4.42475863650862,0,0,0,0,25.3723804616085,16.8220185571323,11.3929437434833,21.440859791201,21.3908382004821,28.5328256924796,19.4411317405721,12.6900028207083,0,0,0,20.0667429135776,12.1186138900214,12.7343899593661,16.4209060910687,45.5040966866822,55.1535465981216,62.2320333208216,22.7235358192189,59.5290017600533,49.7551600292359,41.5201723798512,10.0253790836027,22.6850982254148,20.7158616883772,36.1221475871975,7.66523227842587,16.1447512035209,15.3620382154229,19.6834974945326,15.3501210374956,34.5836928861611,0,0,0.270455678475983,8.3267991999455,0,0.561421621224659,10.1090643697607,0,5.90649936670635,0,0.95497793895076,1.18785872333055,1.84296421259539,0,0.422008249231538,0.445234820091624,14.9971525546351,0,1.9924798825107,8.84108529699673,0.503865495708552,0,14.0316678225619,0,0.0898683511473268,0.179021174675609,14.8355987365793,2.76201535783414,21.5534783112246,0,0,0.463840490809256,0,0,0.437299999980979,5.07499702804355,0.227586896570999,1.01701460117107,0,4.48166385213904,5.83209226766509,0,0,0,0,0.110579259931225,0,0.219385397153973,1.96089234334182,0.139423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| ||
|short_description=p3@KCNAB2 | |||
}} | }} |
Latest revision as of 18:01, 18 September 2015
Short description: | p3@KCNAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNAB2_5end |
Coexpression cluster: | C2595_Melanocyte_granulocyte_Monocytederived_CD14_acute_CD4_Macrophage |
Association with transcript: | 44bp_to_ENST00000341524, ENST00000352527, ENST00000378087, uc001alu.2, uc001alv.1, uc001alw.1_5end |
EntrezGene: | KCNAB2 |
HGNC: | 6229 |
UniProt: | Q13303E7ESI4Q2YD85B0AZR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.64e-50 | 98 |
blood island | 1.64e-50 | 98 |
hemolymphoid system | 2.60e-44 | 108 |
bone marrow | 2.36e-39 | 76 |
immune system | 1.11e-36 | 93 |
bone element | 3.93e-34 | 82 |
skeletal element | 2.40e-28 | 90 |
skeletal system | 1.47e-22 | 100 |
connective tissue | 1.96e-13 | 371 |
lateral plate mesoderm | 9.45e-11 | 203 |
blood | 4.16e-08 | 15 |
haemolymphatic fluid | 4.16e-08 | 15 |
organism substance | 4.16e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.79e-13 | 51 |
immune system cancer | 7.79e-13 | 51 |
leukemia | 7.49e-10 | 39 |