FFCP PHASE1:Hg19::chr20:57089934..57089974,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:57089934..57089974,- to FFCP PHASE1:Hg19::chr20:57089934..57089974,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=164284 | |EntrezGene=164284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26892 | |HGNC=26892 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6V6,Q8NCL9 | |UniProt=F5H6V6,Q8NCL9 | ||
|association_with_transcript=0bp_to_ENST00000439429,NM_153360,uc002xze.1,uc010zzp.1_5end | |||
|cluster_id=chr20:57089934..57089974,- | |||
|coexpression_cluster_id=C4054 | |||
|description=CAGE_peak_2_at_APCDD1L_5end | |||
|id=chr20:57089934..57089974,- | |||
|ontology_enrichment_celltype=CL:0000055!3.55e-42!180;CL:0000680!2.98e-23!57;CL:0000056!2.98e-23!57;CL:0000355!2.98e-23!57;CL:0000183!1.50e-22!59;CL:0000187!8.22e-22!54;CL:0000393!9.93e-20!60;CL:0000211!9.93e-20!60;CL:0000057!5.56e-19!75;CL:0000192!8.78e-19!42;CL:0000514!8.78e-19!42;CL:0000359!1.56e-15!32;CL:0000222!2.97e-10!119;CL:0002620!1.96e-09!23;CL:0000048!9.19e-08!430;CL:0000034!1.53e-07!444;CL:0000723!2.20e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.52e-14;32!CL:0000134;1.16e-11;55!CL:0000192;1.56e-11;43!CL:0002620;1.91e-11;23!CL:0000187;6.95e-11;55!CL:0000723;1.16e-10;61!CL:0000048;8.02e-10;58!CL:0002320;2.93e-08;188!CL:0000034;5.25e-08;69!CL:0000057;7.57e-08;73!CL:0000393;1.70e-07;61!CL:0000211;1.70e-07;61!CL:0002570;4.16e-07;8!CL:0002540;4.29e-07;6!CL:0002539;9.68e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.22e-21,76;CL:0000680,9.10e-21,58;CL:0000056,9.10e-21,58;CL:0000355,9.10e-21,58;CL:0000187,5.13e-19,55;CL:0000192,4.64e-16,43;CL:0000514,4.64e-16,43;CL:0000393,9.92e-16,61;CL:0000211,9.92e-16,61;CL:0000048,1.58e-15,427;CL:0000359,3.67e-15,32;CL:0000723,1.08e-14,433;CL:0000034,1.25e-13,441;CL:0002620,1.97e-11,23;CL:0000222,1.23e-08,121;CL:0002570,3.47e-07,8;CL:0002540,4.17e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000514;1.56e-11;43!CL:0000355;1.05e-10;58 | |||
|ontology_enrichment_disease=DOID:2394!1.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.36e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.35e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.07e-28!83;UBERON:0002329!5.07e-28!83;UBERON:0003077!5.07e-28!83;UBERON:0003059!5.07e-28!83;UBERON:0007282!5.07e-28!83;UBERON:0009618!5.07e-28!83;UBERON:0007285!5.07e-28!83;UBERON:0004290!9.81e-27!70;UBERON:0000486!1.07e-23!82;UBERON:0002385!2.49e-23!63;UBERON:0001015!2.49e-23!63;UBERON:0000383!2.49e-23!63;UBERON:0001134!5.98e-23!61;UBERON:0002036!5.98e-23!61;UBERON:0003082!5.98e-23!61;UBERON:0005256!2.20e-21!143;UBERON:0001637!2.11e-12!42;UBERON:0003509!2.11e-12!42;UBERON:0004572!2.11e-12!42;UBERON:0000481!1.11e-11!347;UBERON:0004573!3.15e-11!33;UBERON:0004571!3.15e-11!33;UBERON:0002100!5.16e-11!216;UBERON:0000475!5.44e-11!365;UBERON:0003104!8.01e-11!238;UBERON:0009142!8.01e-11!238;UBERON:0003102!5.53e-10!95;UBERON:0004872!8.88e-10!84;UBERON:0001981!1.56e-09!60;UBERON:0007500!1.56e-09!60;UBERON:0004537!1.56e-09!60;UBERON:0006965!1.56e-09!60;UBERON:0002049!1.99e-09!79;UBERON:0007798!1.99e-09!79;UBERON:0003914!3.78e-09!118;UBERON:0000490!9.23e-09!138;UBERON:0004535!4.15e-08!110;UBERON:0000055!5.71e-08!69;UBERON:0001009!2.15e-07!113;UBERON:0002199!3.56e-07!45;UBERON:0002416!3.56e-07!45;UBERON:0001135!3.83e-07!15;UBERON:0000468!5.36e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.21e-13;33!UBERON:0004571;7.21e-13;33!UBERON:0002385;1.06e-12;31!UBERON:0001015;1.06e-12;31!UBERON:0000383;1.06e-12;31!UBERON:0001637;8.07e-10;42!UBERON:0003509;8.07e-10;42!UBERON:0004572;8.07e-10;42!UBERON:0002204;2.00e-09;70!UBERON:0001134;4.29e-08;16!UBERON:0002036;4.29e-08;16!UBERON:0000947;8.35e-07;21!UBERON:0010191;8.35e-07;21!UBERON:0004237;9.68e-07;10!UBERON:0004695;9.68e-07;10!UBERON:0002111;9.68e-07;10!UBERON:0004178;9.68e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.38e-25,71;UBERON:0003059,5.38e-25,71;UBERON:0007282,5.38e-25,71;UBERON:0004290,5.38e-25,71;UBERON:0009618,5.38e-25,71;UBERON:0007524,7.92e-25,73;UBERON:0003077,2.24e-24,72;UBERON:0007285,2.24e-24,72;UBERON:0007503,5.75e-24,78;UBERON:0002385,4.43e-21,64;UBERON:0001015,4.43e-21,64;UBERON:0000383,4.43e-21,64;UBERON:0001134,4.55e-21,62;UBERON:0002036,4.55e-21,62;UBERON:0003082,4.55e-21,62;UBERON:0000486,5.96e-21,83;UBERON:0003104,1.09e-18,160;UBERON:0009142,1.09e-18,160;UBERON:0005256,1.88e-16,122;UBERON:0004573,2.34e-14,33;UBERON:0004571,2.34e-14,33;UBERON:0001637,8.64e-14,42;UBERON:0003509,8.64e-14,42;UBERON:0004572,8.64e-14,42;UBERON:0000490,1.65e-10,148;UBERON:0007500,1.66e-10,59;UBERON:0001981,1.66e-10,59;UBERON:0004537,1.66e-10,59;UBERON:0006965,1.66e-10,59;UBERON:0004872,5.76e-10,83;UBERON:0000926,1.81e-09,315;UBERON:0004120,1.81e-09,315;UBERON:0006603,1.81e-09,315;UBERON:0000055,1.99e-09,68;UBERON:0002199,4.49e-09,46;UBERON:0002416,4.49e-09,46;UBERON:0003914,1.36e-08,117;UBERON:0002049,2.25e-08,78;UBERON:0007798,2.25e-08,78;UBERON:0002097,2.85e-08,41;UBERON:0002204,4.70e-08,167;UBERON:0002100,1.65e-07,199;UBERON:0004535,1.80e-07,109;UBERON:0003102,2.92e-07,99;UBERON:0001009,6.18e-07,112;UBERON:0002384,7.83e-07,371;UBERON:0000947,9.63e-07,21;UBERON:0010191,9.63e-07,21 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0,0,0,5.05375898741465,0.261185628199839,1.47440361900905,0,0,0.263766978228454,2.84662611808107,5.63375538737457,0.672325146451775,3.01347264011988,4.38186054232424,3.41552959153355,5.17108443922509,4.28401451612931,0.313454721478088,0.85870796139317,1.36874425072884,0.502170558379211,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,6.14446559053763,3.50936537445123,5.5041677205113,23.858578411533,25.3050132557371,0,0.443458794925128,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,2.98183171017191,3.03913227994991,3.57504788195691,9.46560848471085,3.54668382198357,0,5.33744978648525,9.12669929143492,0.311211035399766,8.35206166832066,1.79808093424805,0.454072282934794,1.72852777344,1.17160715916898,11.8620829195522,0.570471821544449,1.49448680551801,1.40921398372518,1.29498355494505,1.26405726032024,0.61246251376468,0.245668634623536,0.206651562351531,2.37600571456411,4.45080472701402,11.8320977051943,18.6840716872222,0.168336113954066,1.00094815897571,0,21.5099034231611,6.12975591598039,10.3664260645552,0.794025282120147,11.8397159554649,2.77624605464138,1.48352330811693,38.1115692027191,5.25567899116038,6.44101350114073,5.21127197728451,18.7341728787806,4.96928726322113,6.05841058185875,1.56484827691909,4.0411514204703,23.7856426986132,3.52632343796741,6.10418132317755,0.193260853163297,0.272746120590835,0,0.121973706129595,0.927708378250397,0.69716365721711,0.725627385107593,0.504641701751257,1.45990943630332,6.25798129319264,12.8648187638577,6.90674606762403,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,7.01208869017229,1.2347220339942,1.47008711385542,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,2.08674728955138,0.70445216541493,0,0,0,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0.25248486685276,0.063497894292169,0,0,0,0.411309970813294,0,0,0,0,0.1466765716419,14.8662473121444,3.57656445851882,8.45302752556,0.797814349754612,1.04007436911366,5.40135485950498,22.6958611237245,15.985330740966,1.00084595560703,5.42621605391443,5.76268235746538,4.56030658011229,0,10.2953743481346,0,2.61460037580088,0.799783929456456,0,0,0,0.479249710983165,3.44585807502342,12.8373214536647,1.59259437334337,8.01357657946495,4.1184021545176,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,1.59498939234882,4.00136416847742,1.89885516589815,0.623912584592421,1.07057393278297,0.788512075169673,3.39710103478868,6.62081419400982,22.7407504055985,4.1389228517002,47.8242430945514,26.5491602700053,0.260650843404249,1.56640925970192,4.11772108573027,0,0,0,0,0,0.604780586659361,0.992431231275107,2.14846762603287,1.68396056659844,1.53766979106841,1.02341449813341,1.76939313257968,0,3.39261326365842,8.16783936440384,6.24166385704949,13.5006151587741,1.27831416305955,0,0.40101294060657,0,6.42960909721798,1.82091168006717,0.786746489756545,0.451199612907412,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0,0.863663664408557,1.54227252690289,1.89662506280697,3.01013864312912,0.254876273045038,2.49322802678617,1.11937377361089,0,0,0,0.328014645699706,0.650756789328606,0,0,0,0,0,0,2.90012154876366,2.15668063960502,3.37708084397485,2.75673144969061,1.50388342815583,2.61030049045611,2.72725207731523,6.32127453091835,0,0.384380134730212,0,0.10115778085555,2.32422774648643,31.481234683064,5.5762981612848,10.1651081458109,2.66153015158511,8.69932992075073,2.59453906745488,4.15062171551775,0.372158369359667,0.316379424718726,0.762520775695299,1.27948895655667,0.855877976067841,13.0463331649634,1.56989728039846,1.07923474549989,0.823611089208164,1.88499843753098,2.62837226045311,6.34041284692033,12.6377536871694,5.36397112998549,2.92456187557541,3.16950440270266,0.818999468447914,15.271786651001,10.1707304958219,12.1300375580147,18.5762913067542,10.0843703608365,10.9967351510671,1.31178950409327,3.65238678532867,0.92947049429925,16.0566493443378,2.43799298746888,1.57198465620994,2.1400263088875,0.709522128141196,10.3442741295855,6.25660296623814,1.89736586882858,1.04980416073495,0,0,0,0,0,0,0.443430153536676,0,1.01489521846434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,6.23328748128273,0,0,6.37593562403423,0.552567831062295,0,0.409074730008619,0,0.311039587661807,0,0,0,3.35387579165574,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591095237907095,0,0,0,0.461701551022782,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,3.05515072466813,0,0,0,0,5.61804353109152,0,0,0,0,0,2.41981432097328,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,2.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| ||
|short_description=p2@APCDD1L | |||
}} | }} |
Latest revision as of 05:28, 17 September 2015
Short description: | p2@APCDD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APCDD1L_5end |
Coexpression cluster: | C4054_Osteoblast_Fibroblast_leiomyoblastoma_meningioma_Smooth_salivary_Chondrocyte |
Association with transcript: | 0bp_to_ENST00000439429, NM_153360, uc002xze.1, uc010zzp.1_5end |
EntrezGene: | APCDD1L |
HGNC: | 26892 |
UniProt: | F5H6V6Q8NCL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.22e-21 | 76 |
muscle precursor cell | 9.10e-21 | 58 |
myoblast | 9.10e-21 | 58 |
multi-potent skeletal muscle stem cell | 9.10e-21 | 58 |
muscle cell | 5.13e-19 | 55 |
smooth muscle cell | 4.64e-16 | 43 |
smooth muscle myoblast | 4.64e-16 | 43 |
electrically responsive cell | 9.92e-16 | 61 |
electrically active cell | 9.92e-16 | 61 |
multi fate stem cell | 1.58e-15 | 427 |
vascular associated smooth muscle cell | 3.67e-15 | 32 |
somatic stem cell | 1.08e-14 | 433 |
stem cell | 1.25e-13 | 441 |
skin fibroblast | 1.97e-11 | 23 |
mesodermal cell | 1.23e-08 | 121 |
mesenchymal stem cell of adipose | 3.47e-07 | 8 |
mesenchymal stem cell of the bone marrow | 4.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.35e-10 | 14 |