FFCP PHASE1:Hg19::chr2:218770139..218770150,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:218770139..218770150,- to FFCP PHASE1:Hg19::chr2:218770139..218770150,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7145 | |EntrezGene=7145 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |HGNC=11973 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_AK310169_5end | |||
|cluster_id=chr2:218770139..218770150,- | |||
|coexpression_cluster_id=C1893 | |||
|description=CAGE_peak_13_at_TNS1_5end | |||
|id=chr2:218770139..218770150,- | |||
|ontology_enrichment_celltype=CL:0000839!4.86e-26!70;CL:0000557!6.82e-24!71;CL:0000766!4.23e-23!76;CL:0000763!9.54e-21!112;CL:0000049!9.54e-21!112;CL:0002194!6.45e-19!63;CL:0000576!6.45e-19!63;CL:0000040!6.45e-19!63;CL:0000559!6.45e-19!63;CL:0002009!4.51e-18!65;CL:0002274!2.18e-11!5;CL:0000457!2.18e-11!5;CL:0002191!2.18e-11!5;CL:0000097!2.18e-11!5;CL:0000831!2.18e-11!5;CL:0002028!2.18e-11!5;CL:0002057!6.40e-11!42;CL:0002031!2.67e-10!124;CL:0002032!2.90e-10!165;CL:0000837!2.90e-10!165;CL:0000860!7.30e-10!45;CL:0000148!1.98e-09!10;CL:0000541!1.98e-09!10;CL:0000037!2.12e-09!172;CL:0000566!2.12e-09!172;CL:0000738!1.09e-08!140;CL:0000988!2.69e-08!182;CL:0002619!1.07e-07!3;CL:0002567!2.12e-07!3;CL:0000235!2.19e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.22e-33;6!CL:0000097;5.25e-29;5!CL:0000148;8.15e-20;10!CL:0002619;1.05e-18;3!CL:0002567;7.07e-18;3!CL:0000163;4.91e-16;9!CL:0000147;5.32e-14;14!CL:0000766;7.54e-10;69!CL:0000710;1.25e-09;20!CL:0000473;4.22e-08;39!CL:0000234;4.22e-08;39!CL:0000075;5.55e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.22e-33,6;CL:0000097,4.69e-29,5;CL:0002028,4.69e-29,5;CL:0000839,6.79e-21,66;CL:0000557,1.56e-20,67;CL:0000148,7.15e-20,10;CL:0000541,7.15e-20,10;CL:0000766,7.13e-19,72;CL:0002619,1.02e-18,3;CL:0002567,6.88e-18,3;CL:0000163,4.62e-16,9;CL:0000147,4.85e-14,14;CL:0000763,1.97e-11,108;CL:0000049,1.97e-11,108;CL:0002194,3.35e-11,59;CL:0000576,3.35e-11,59;CL:0000040,3.35e-11,59;CL:0000559,3.35e-11,59;CL:0002009,9.16e-11,61;CL:0002031,6.08e-10,120;CL:0000710,1.17e-09,20;CL:0000738,2.28e-08,136;CL:0000473,6.74e-08,48;CL:0000234,6.74e-08,48;CL:0000075,5.31e-07,27;CL:0002566,8.02e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010226;3.67e-07;1!UBERON:0004140;6.56e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.64e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.70e-12,2;DOID:178,9.51e-07,1;DOID:326,9.51e-07,1;DOID:3978,9.51e-07,1;DOID:3394,9.51e-07,1;DOID:5844,9.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-26!115;UBERON:0002390!1.78e-21!102;UBERON:0003061!1.78e-21!102;UBERON:0002193!9.78e-21!112;UBERON:0002371!4.77e-20!80;UBERON:0001474!6.08e-18!86;UBERON:0002405!2.36e-14!115;UBERON:0004765!8.19e-14!101;UBERON:0001434!8.19e-14!101;UBERON:0003081!5.90e-10!216;UBERON:0002298!2.39e-07!8;UBERON:0002204!6.13e-07!167;UBERON:0003978!7.95e-07!3;UBERON:0009751!7.95e-07!3;UBERON:0000946!7.95e-07!3;UBERON:0002523!7.95e-07!3;UBERON:0005983!7.95e-07!3;UBERON:0002165!7.95e-07!3;UBERON:0002062!7.95e-07!3;UBERON:0007280!7.95e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.81e-10;25!UBERON:0004151;2.12e-08;3!UBERON:0003978;3.07e-08;3!UBERON:0000946;3.07e-08;3!UBERON:0002084;3.67e-07;1!UBERON:0002082;3.67e-07;1!UBERON:0002146;6.56e-07;1!UBERON:0002171;6.56e-07;1!UBERON:0005623;6.56e-07;1!UBERON:0006518;6.56e-07;1!UBERON:0008949;6.56e-07;1!UBERON:0000101;6.56e-07;1!UBERON:0002167;6.56e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.06e-17,76;UBERON:0002390,1.82e-16,98;UBERON:0003061,1.82e-16,98;UBERON:0001474,3.73e-16,82;UBERON:0002193,1.40e-14,108;UBERON:0004765,2.06e-14,90;UBERON:0002405,7.77e-14,93;UBERON:0001434,1.26e-12,100;UBERON:0003081,1.06e-09,203;UBERON:0007100,2.86e-09,27;UBERON:0004151,2.08e-08,3;UBERON:0003978,3.13e-08,3;UBERON:0009751,3.13e-08,3;UBERON:0000946,3.13e-08,3;UBERON:0002523,3.13e-08,3;UBERON:0005983,3.13e-08,3;UBERON:0002165,3.13e-08,3;UBERON:0002062,3.13e-08,3;UBERON:0007280,3.13e-08,3;UBERON:0002084,3.57e-07,1;UBERON:0002082,3.57e-07,1;UBERON:0010226,3.57e-07,1;UBERON:0002146,6.76e-07,1;UBERON:0005623,6.76e-07,1;UBERON:0002171,7.57e-07,1;UBERON:0006518,7.57e-07,1;UBERON:0008949,7.57e-07,1;UBERON:0000101,7.57e-07,1;UBERON:0002167,7.57e-07,1 | |||
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| ||
|short_description=p13@TNS1 | |||
}} | }} |
Latest revision as of 15:10, 24 September 2015
Short description: | p13@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TNS1_5end |
Coexpression cluster: | C1893_Mast_CD14_heart_Monocytederived_Melanocyte_Macrophage_left |
Association with transcript: | 33bp_to_AK310169_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.22e-33 | 6 |
mast cell | 4.69e-29 | 5 |
basophil mast progenitor cell | 4.69e-29 | 5 |
myeloid lineage restricted progenitor cell | 6.79e-21 | 66 |
granulocyte monocyte progenitor cell | 1.56e-20 | 67 |
melanocyte | 7.15e-20 | 10 |
melanoblast | 7.15e-20 | 10 |
myeloid leukocyte | 7.13e-19 | 72 |
adult endothelial progenitor cell | 1.02e-18 | 3 |
light melanocyte | 6.88e-18 | 3 |
endocrine cell | 4.62e-16 | 9 |
pigment cell | 4.85e-14 | 14 |
myeloid cell | 1.97e-11 | 108 |
common myeloid progenitor | 1.97e-11 | 108 |
monopoietic cell | 3.35e-11 | 59 |
monocyte | 3.35e-11 | 59 |
monoblast | 3.35e-11 | 59 |
promonocyte | 3.35e-11 | 59 |
macrophage dendritic cell progenitor | 9.16e-11 | 61 |
hematopoietic lineage restricted progenitor cell | 6.08e-10 | 120 |
neurecto-epithelial cell | 1.17e-09 | 20 |
leukocyte | 2.28e-08 | 136 |
defensive cell | 6.74e-08 | 48 |
phagocyte | 6.74e-08 | 48 |
columnar/cuboidal epithelial cell | 5.31e-07 | 27 |
dark melanocyte | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.06e-17 | 76 |
hematopoietic system | 1.82e-16 | 98 |
blood island | 1.82e-16 | 98 |
bone element | 3.73e-16 | 82 |
hemolymphoid system | 1.40e-14 | 108 |
skeletal element | 2.06e-14 | 90 |
immune system | 7.77e-14 | 93 |
skeletal system | 1.26e-12 | 100 |
lateral plate mesoderm | 1.06e-09 | 203 |
primary circulatory organ | 2.86e-09 | 27 |
cardiac chamber | 2.08e-08 | 3 |
valve | 3.13e-08 | 3 |
cardiac mesenchyme | 3.13e-08 | 3 |
cardial valve | 3.13e-08 | 3 |
tunica intima | 3.13e-08 | 3 |
heart layer | 3.13e-08 | 3 |
endocardium | 3.13e-08 | 3 |
endocardial cushion | 3.13e-08 | 3 |
presumptive endocardium | 3.13e-08 | 3 |
heart left ventricle | 3.57e-07 | 1 |
cardiac ventricle | 3.57e-07 | 1 |
future cardiac ventricle | 3.57e-07 | 1 |
pulmonary valve | 6.76e-07 | 1 |
semi-lunar valve | 6.76e-07 | 1 |
lower lobe of right lung | 7.57e-07 | 1 |
right lung lobe | 7.57e-07 | 1 |
lower lobe of lung | 7.57e-07 | 1 |
lobe of lung | 7.57e-07 | 1 |
right lung | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.70e-12 | 2 |
vascular disease | 9.51e-07 | 1 |
ischemia | 9.51e-07 | 1 |
extrinsic cardiomyopathy | 9.51e-07 | 1 |
myocardial ischemia | 9.51e-07 | 1 |
myocardial infarction | 9.51e-07 | 1 |