FFCP PHASE1:Hg19::chr3:112359502..112359520,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112359502..112359520,- to FFCP PHASE1:Hg19::chr3:112359502..112359520,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=382bp_to_ENST00000475181_5end | |||
|cluster_id=chr3:112359502..112359520,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_13_at_CCDC80_5end | |||
|id=chr3:112359502..112359520,- | |||
|ontology_enrichment_celltype=CL:0000055!5.59e-29!180;CL:0000057!2.31e-15!75;CL:0000680!1.09e-14!57;CL:0000056!1.09e-14!57;CL:0000355!1.09e-14!57;CL:0000187!3.50e-13!54;CL:0000183!1.54e-11!59;CL:0000359!2.22e-11!32;CL:0000192!2.40e-11!42;CL:0000514!2.40e-11!42;CL:0000393!4.14e-10!60;CL:0000211!4.14e-10!60;CL:0000136!1.11e-08!15;CL:0002334!8.30e-08!12;CL:0002494!2.19e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.60e-11;13!CL:0000359;2.35e-10;32!CL:0002494;1.20e-08;16!CL:0002334;2.08e-08;12!CL:0002620;3.05e-08;23!CL:0000192;8.47e-08;43!CL:0000057;5.52e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.68e-19,76;CL:0000048,3.34e-13,427;CL:0000723,1.73e-12,433;CL:0000136,1.78e-12,15;CL:0000680,4.31e-12,58;CL:0000056,4.31e-12,58;CL:0000355,4.31e-12,58;CL:0000034,1.41e-11,441;CL:0000359,1.84e-10,32;CL:0000187,2.71e-10,55;CL:0000192,2.78e-10,43;CL:0000514,2.78e-10,43;CL:0002494,1.73e-08,16;CL:0002334,1.89e-08,12;CL:0000393,2.25e-08,61;CL:0000211,2.25e-08,61;CL:0002620,2.81e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;8.47e-08;43!CL:0000355;7.01e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.71e-14!84;UBERON:0001134!1.81e-13!61;UBERON:0002036!1.81e-13!61;UBERON:0003082!1.81e-13!61;UBERON:0002385!3.66e-13!63;UBERON:0001015!3.66e-13!63;UBERON:0000383!3.66e-13!63;UBERON:0004290!1.46e-11!70;UBERON:0000914!1.55e-11!83;UBERON:0002329!1.55e-11!83;UBERON:0003077!1.55e-11!83;UBERON:0003059!1.55e-11!83;UBERON:0007282!1.55e-11!83;UBERON:0009618!1.55e-11!83;UBERON:0007285!1.55e-11!83;UBERON:0000948!4.48e-10!24;UBERON:0005498!4.48e-10!24;UBERON:0004140!4.48e-10!24;UBERON:0009881!4.48e-10!24;UBERON:0004141!4.48e-10!24;UBERON:0003084!4.48e-10!24;UBERON:0007005!4.48e-10!24;UBERON:0004139!4.48e-10!24;UBERON:0004291!4.48e-10!24;UBERON:0000475!1.34e-09!365;UBERON:0000486!1.67e-09!82;UBERON:0007100!2.21e-09!27;UBERON:0002049!4.32e-09!79;UBERON:0007798!4.32e-09!79;UBERON:0004535!5.12e-09!110;UBERON:0001009!5.90e-09!113;UBERON:0000119!1.45e-08!312;UBERON:0000477!2.82e-08!286;UBERON:0000483!4.62e-08!309;UBERON:0001981!5.68e-08!60;UBERON:0007500!5.68e-08!60;UBERON:0004537!5.68e-08!60;UBERON:0006965!5.68e-08!60;UBERON:0001637!7.37e-08!42;UBERON:0003509!7.37e-08!42;UBERON:0004572!7.37e-08!42;UBERON:0000055!4.91e-07!69;UBERON:0000025!7.88e-07!194;UBERON:0004573!8.60e-07!33;UBERON:0004571!8.60e-07!33;UBERON:0004111!8.95e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0000948;1.28e-11;22!UBERON:0007100;1.54e-09;25!UBERON:0004457;1.04e-08;9!UBERON:0000042;1.04e-08;9!UBERON:0003688;1.91e-08;6!UBERON:0002358;1.91e-08;6!UBERON:0003684;1.91e-08;6!UBERON:0001178;1.91e-08;6!UBERON:0002384;4.78e-07;198!UBERON:0001013;6.13e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.73e-15,83;UBERON:0000948,9.14e-13,24;UBERON:0005498,9.14e-13,24;UBERON:0004140,9.14e-13,24;UBERON:0009881,9.14e-13,24;UBERON:0004141,9.14e-13,24;UBERON:0003084,9.14e-13,24;UBERON:0007005,9.14e-13,24;UBERON:0004139,9.14e-13,24;UBERON:0004291,9.14e-13,24;UBERON:0001134,1.41e-11,62;UBERON:0002036,1.41e-11,62;UBERON:0003082,1.41e-11,62;UBERON:0002385,7.11e-11,64;UBERON:0001015,7.11e-11,64;UBERON:0000383,7.11e-11,64;UBERON:0007100,1.24e-10,27;UBERON:0004535,3.01e-10,109;UBERON:0007524,6.77e-10,73;UBERON:0001009,1.35e-09,112;UBERON:0002329,1.36e-09,71;UBERON:0003059,1.36e-09,71;UBERON:0007282,1.36e-09,71;UBERON:0004290,1.36e-09,71;UBERON:0009618,1.36e-09,71;UBERON:0003077,2.60e-09,72;UBERON:0007285,2.60e-09,72;UBERON:0003914,2.66e-09,117;UBERON:0004797,6.04e-09,7;UBERON:0000486,1.34e-08,83;UBERON:0007500,1.47e-08,59;UBERON:0001981,1.47e-08,59;UBERON:0004537,1.47e-08,59;UBERON:0006965,1.47e-08,59;UBERON:0003688,2.01e-08,6;UBERON:0002358,2.01e-08,6;UBERON:0003684,2.01e-08,6;UBERON:0001178,2.01e-08,6;UBERON:0002049,4.82e-08,78;UBERON:0007798,4.82e-08,78;UBERON:0001637,5.59e-08,42;UBERON:0003509,5.59e-08,42;UBERON:0004572,5.59e-08,42;UBERON:0000926,6.59e-08,315;UBERON:0004120,6.59e-08,315;UBERON:0006603,6.59e-08,315;UBERON:0007503,8.26e-08,78;UBERON:0002199,1.74e-07,46;UBERON:0002416,1.74e-07,46;UBERON:0005256,5.96e-07,122;UBERON:0000055,6.06e-07,68;UBERON:0001013,7.94e-07,14 | |||
|phase1_expression=5.81370813665781,11.9896293378951,29.177561647866,10.007329835313,22.3480547213644,19.1914475302081,2.53299878168311,0,2.08948502559871,0,0,2.40285509343189,0.791300934685361,0.74259811776028,0.994192127183747,1.34465029290355,0,0.730310090387373,0.487932798790507,0.61560529038394,1.22400414746552,0.940364164434263,0.572471974262113,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,5.36560687762909,11.6354931277613,0.722878304769133,6.51739283826656,4.20054904986389,0.795285947051099,2.91980922181582,0,1.10864698731282,0.790513071238134,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,1.46437234528902,0,0,0.17859945656816,0,0,0,0,0,0,0,0,15.9031024542502,20.2608818663328,15.4918741551466,47.3280424235543,8.15737279056221,15.1382952038423,1.06748995729705,4.44001587150888,9.33633106199299,0.67355336034844,1.14423332179421,1.81628913173918,1.15235184896,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0,0,0,0.103325781175765,0,1.23633464639278,0.910161361938026,0,0.168336113954066,0,0.277064115484183,2.19488810440419,0.612975591598039,1.05166641234618,1.92834711372036,8.61070251306537,5.12537733164562,5.51022943014861,10.5031883629541,3.91599611106068,4.63752972082133,3.53622027030021,10.801685263441,5.74878330451072,6.05841058185875,3.77404584433427,3.07127507955743,12.4253357380815,3.12331504505685,2.54340888465731,0.193260853163297,0,0,0,0,0.464775771478074,0.10366105501537,0.252320850875628,0,0,4.5026865673502,0,1.85747171212792,2.88751792667834,0,0,0,0,0,0,0,0.196221465125346,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.686271241194102,0,0,0,0,0,1.03993478527958,0,0.34779121492523,3.87448690978212,0.288732895522148,0.925971025153221,2.85381228351897,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0.285826432630578,0.672786506072164,1.74384027533312,1.466765716419,12.9271715757778,3.57656445851882,0,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.532844358032199,1.71573592389777,0.542621605391443,1.64648067356154,0.65147236858747,2.13235169245527,0.791951872933429,0,0.871533458600294,0.599837947092342,0,0,0,2.63587341040741,3.44585807502342,0,8.10775317338444,2.87666851570537,2.68591444859843,0,0,0,0,1.52456774533478,0,0,0,0,0,0,0,1.8403723757871,0.500170521059677,0.813795071099207,1.87173775377726,2.67643483195743,1.73472656537328,2.22568688486155,3.31040709700491,6.82222512167955,2.0694614258501,1.32845119707087,1.29058417979192,0.521301686808497,0.195801157462741,0.343143423810856,0,0,0,0.606255142892519,8.32177197552485,2.11673205330776,15.1345762769454,8.13348458426731,10.9457436828899,43.4391715976826,7.16390148693385,32.9750538344395,19.2943486378488,1.54209693802656,2.66342587969691,1.39616165223476,0.519254429183621,0.929683027679674,0,0,0.0920809889358963,2.41110341145674,1.0925470080403,1.83574180943194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29610251989794,0.976135183992909,0.103041011647722,0.732555718546747,0.495056999523528,0.574265537996172,0,14.4615536859744,0.386682873168488,0.770243085573222,0.307007349452259,0.551346289938122,0.322260734604821,1.0151168573996,0.170453254832202,2.31483292681517,0,0,0,0.10115778085555,2.32422774648643,49.1107261055799,2.0911118104818,2.46426864140871,1.59691809095107,0.869932992075073,4.07713282028624,5.00937103596969,1.116475108079,3.16379424718726,2.09693213316207,0.255897791311334,0.855877976067841,0.95460974377781,3.92474320099615,0,2.47083326762449,1.06031162111118,2.62837226045311,0,0.842516912477962,0,2.43713489631284,1.05650146756755,1.9109987597118,4.3835683905651,3.39024349860728,0.551365343546124,1.32687795048244,1.31535265576129,0,2.62357900818653,7.50768394762005,0.92947049429925,4.22543403798362,2.00775893085672,7.07393095294472,9.27344733851251,0.354761064070598,3.79993743535795,4.61012850143863,0.379473173765715,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0.95497793895076,3.8605408508243,0.921482106297696,0,0.140669416410513,1.22439575525196,0,0,2.39097585901284,0.276283915531148,0,0,0,7.77598969154519,0.179736702294654,0,0,1.08507746200627,0,3.33410970433911,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.844175070377856,1.52581736317083,1.43753037910592,0.295547618953547,0,0,0,1.84680620409113,0.227884111694002,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0,0,0,0,0,1.07841812769083,4.01288823649394,0.702793337176017,0,0,0,0.789168805698781,0,0.61214552326098,3.85438135733777,0,0,0,0,0,0,0,0,0,0,0.783532859223623,2.79562669187248,0.171986032471617,0,0,0,0.678923115418936,0,1.35588444468319,0,0.19871461170299,0.2532431838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| ||
|short_description=p13@CCDC80 | |||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p13@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 382bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.68e-19 | 76 |
multi fate stem cell | 3.34e-13 | 427 |
somatic stem cell | 1.73e-12 | 433 |
fat cell | 1.78e-12 | 15 |
muscle precursor cell | 4.31e-12 | 58 |
myoblast | 4.31e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.31e-12 | 58 |
stem cell | 1.41e-11 | 441 |
vascular associated smooth muscle cell | 1.84e-10 | 32 |
muscle cell | 2.71e-10 | 55 |
smooth muscle cell | 2.78e-10 | 43 |
smooth muscle myoblast | 2.78e-10 | 43 |
cardiocyte | 1.73e-08 | 16 |
preadipocyte | 1.89e-08 | 12 |
electrically responsive cell | 2.25e-08 | 61 |
electrically active cell | 2.25e-08 | 61 |
skin fibroblast | 2.81e-08 | 23 |