FFCP PHASE1:Hg19::chr3:93781920..93781933,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:93781920..93781933,+ to FFCP PHASE1:Hg19::chr3:93781920..93781933,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63899 | |EntrezGene=63899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26208 | |HGNC=26208 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000468555_5end | |||
|cluster_id=chr3:93781920..93781933,+ | |||
|coexpression_cluster_id=C4003 | |||
|description=CAGE_peak_2_at_NSUN3_5end | |||
|id=chr3:93781920..93781933,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.13e-28!119;CL:0000738!3.76e-28!140;CL:0002031!3.33e-26!124;CL:0000037!6.29e-24!172;CL:0000566!6.29e-24!172;CL:0000988!5.57e-23!182;CL:0002032!1.25e-21!165;CL:0000837!1.25e-21!165;CL:0000542!1.41e-17!53;CL:0000051!1.41e-17!53;CL:0002057!2.32e-17!42;CL:0000838!3.68e-17!52;CL:0000860!4.33e-16!45;CL:0000839!1.38e-10!70;CL:0002194!1.60e-10!63;CL:0000576!1.60e-10!63;CL:0000040!1.60e-10!63;CL:0000559!1.60e-10!63;CL:0000945!3.09e-10!24;CL:0000826!3.09e-10!24;CL:0002009!3.58e-10!65;CL:0000557!1.12e-09!71;CL:0000766!3.07e-09!76;CL:0000236!2.02e-08!14;CL:0000763!1.85e-07!112;CL:0000049!1.85e-07!112;CL:0000084!3.31e-07!25;CL:0000827!3.31e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-37;33!CL:0002057;1.64e-37;33!CL:0000473;3.55e-25;39!CL:0000234;3.55e-25;39!CL:0002087;1.44e-18;104!CL:0000576;2.69e-17;48!CL:0000542;2.08e-16;53!CL:0000945;2.53e-14;24!CL:0000236;6.40e-14;13!CL:0000738;3.44e-12;136!CL:0000791;9.19e-12;18!CL:0000789;9.19e-12;18!CL:0002419;9.19e-12;18!CL:0000084;1.22e-11;25!CL:0000766;7.41e-10;69!CL:0000625;1.26e-08;11!CL:0000988;6.89e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.74e-56,115;CL:0000738,9.35e-55,136;CL:0002031,2.04e-50,120;CL:0000037,1.49e-43,168;CL:0000988,4.11e-41,177;CL:0002032,5.50e-39,161;CL:0000837,5.50e-39,161;CL:0000860,3.59e-30,42;CL:0002057,3.59e-30,42;CL:0000542,6.28e-29,53;CL:0000051,6.28e-29,53;CL:0000838,4.83e-28,52;CL:0000473,5.49e-25,48;CL:0000234,5.49e-25,48;CL:0002194,2.70e-23,59;CL:0000576,2.70e-23,59;CL:0000040,2.70e-23,59;CL:0000559,2.70e-23,59;CL:0000839,9.62e-23,66;CL:0002009,3.74e-22,61;CL:0000766,3.76e-21,72;CL:0000557,2.33e-20,67;CL:0000945,6.46e-15,24;CL:0000826,6.46e-15,24;CL:0000763,1.47e-13,108;CL:0000049,1.47e-13,108;CL:0000236,4.58e-13,14;CL:0000791,4.43e-12,18;CL:0000789,4.43e-12,18;CL:0002420,4.43e-12,18;CL:0002419,4.43e-12,18;CL:0000790,4.43e-12,18;CL:0000084,8.39e-12,25;CL:0000827,8.39e-12,25;CL:0000134,1.65e-11,354;CL:0002320,7.95e-11,361;CL:0000219,1.20e-09,386;CL:0000625,7.90e-09,11;CL:0000048,7.65e-07,427;CL:0000723,9.11e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;7.71e-23;42!CL:0000051;2.08e-16;53!CL:0000790;9.19e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.04e-14!102;UBERON:0003061!2.04e-14!102;UBERON:0002193!7.97e-13!112;UBERON:0002371!7.37e-09!80;UBERON:0001474!9.91e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-11;15!UBERON:0000179;2.25e-11;15!UBERON:0000463;2.25e-11;15!UBERON:0002390;7.16e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.73e-27,98;UBERON:0003061,3.73e-27,98;UBERON:0002193,3.03e-24,108;UBERON:0002371,9.63e-19,76;UBERON:0001474,1.68e-16,82;UBERON:0002405,5.07e-16,93;UBERON:0004765,5.28e-14,90;UBERON:0001434,1.73e-11,100;UBERON:0000178,3.16e-11,15;UBERON:0000179,3.16e-11,15;UBERON:0000463,3.16e-11,15;UBERON:0002384,2.50e-10,371;UBERON:0003081,5.09e-07,203 | |||
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| ||
|short_description=p2@NSUN3 | |||
}} | }} |
Latest revision as of 19:58, 19 September 2015
Short description: | p2@NSUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSUN3_5end |
Coexpression cluster: | C4003_CD14_CD4_immature_CD8_Natural_Neutrophils_CD19 |
Association with transcript: | 15bp_to_ENST00000468555_5end |
EntrezGene: | NSUN3 |
HGNC: | 26208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.73e-27 | 98 |
blood island | 3.73e-27 | 98 |
hemolymphoid system | 3.03e-24 | 108 |
bone marrow | 9.63e-19 | 76 |
bone element | 1.68e-16 | 82 |
immune system | 5.07e-16 | 93 |
skeletal element | 5.28e-14 | 90 |
skeletal system | 1.73e-11 | 100 |
blood | 3.16e-11 | 15 |
haemolymphatic fluid | 3.16e-11 | 15 |
organism substance | 3.16e-11 | 15 |
connective tissue | 2.50e-10 | 371 |
lateral plate mesoderm | 5.09e-07 | 203 |