FFCP PHASE1:Hg19::chr4:47916543..47916580,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:47916543..47916580,- to FFCP PHASE1:Hg19::chr4:47916543..47916580,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152518 | |EntrezGene=152518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18726 | |HGNC=18726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000507489,uc010igh.2_5end | |||
|cluster_id=chr4:47916543..47916580,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_2_at_NFXL1_5end | |||
|id=chr4:47916543..47916580,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.52e-15!235;DOID:14566!1.32e-14!239;DOID:0050687!1.31e-11!143;DOID:305!6.37e-11!106;DOID:0050686!6.62e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.45e-15,235;DOID:14566,1.80e-14,239;DOID:0050687,1.21e-11,143;DOID:305,6.94e-11,106;DOID:0050686,8.43e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.17e-10!82;UBERON:0000955!1.17e-09!69;UBERON:0006238!1.17e-09!69;UBERON:0001049!1.33e-09!57;UBERON:0005068!1.33e-09!57;UBERON:0006241!1.33e-09!57;UBERON:0007135!1.33e-09!57;UBERON:0002616!2.59e-09!59;UBERON:0005743!4.05e-09!86;UBERON:0000073!4.86e-09!94;UBERON:0001016!4.86e-09!94;UBERON:0002619!1.15e-08!22;UBERON:0003080!5.82e-08!42;UBERON:0001950!7.07e-08!20;UBERON:0002780!1.33e-07!41;UBERON:0001890!1.33e-07!41;UBERON:0006240!1.33e-07!41;UBERON:0000956!1.37e-07!25;UBERON:0000203!1.37e-07!25;UBERON:0001869!1.69e-07!32;UBERON:0004121!2.65e-07!169;UBERON:0002020!3.56e-07!34;UBERON:0003528!3.56e-07!34;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0000178!4.89e-07!15;UBERON:0000179!4.89e-07!15;UBERON:0000463!4.89e-07!15;UBERON:0001893!9.13e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.96e-08;22!UBERON:0001950;9.89e-08;20!UBERON:0000956;1.23e-07;25!UBERON:0000203;1.23e-07;25!UBERON:0000178;2.45e-07;15!UBERON:0000179;2.45e-07;15!UBERON:0000463;2.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.59e-10,81;UBERON:0001016,3.13e-10,89;UBERON:0000955,2.67e-09,68;UBERON:0006238,2.67e-09,68;UBERON:0001049,3.21e-09,56;UBERON:0005068,3.21e-09,56;UBERON:0006241,3.21e-09,56;UBERON:0007135,3.21e-09,56;UBERON:0002619,1.03e-08,22;UBERON:0000073,2.03e-08,53;UBERON:0002616,2.03e-08,53;UBERON:0001950,6.41e-08,20;UBERON:0000956,1.25e-07,25;UBERON:0000203,1.25e-07,25;UBERON:0002780,1.49e-07,41;UBERON:0001890,1.49e-07,41;UBERON:0003080,1.49e-07,41;UBERON:0006240,1.49e-07,41;UBERON:0011216,1.77e-07,223;UBERON:0001869,1.93e-07,32;UBERON:0003528,4.05e-07,34;UBERON:0002020,4.05e-07,34;UBERON:0000178,4.49e-07,15;UBERON:0000179,4.49e-07,15;UBERON:0000463,4.49e-07,15 | |||
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| ||
|short_description=p2@NFXL1 | |||
}} | }} |
Latest revision as of 22:11, 17 September 2015
Short description: | p2@NFXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFXL1_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_ENST00000507489, uc010igh.2_5end |
EntrezGene: | NFXL1 |
HGNC: | 18726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.59e-10 | 81 |
nervous system | 3.13e-10 | 89 |
brain | 2.67e-09 | 68 |
future brain | 2.67e-09 | 68 |
neural tube | 3.21e-09 | 56 |
neural rod | 3.21e-09 | 56 |
future spinal cord | 3.21e-09 | 56 |
neural keel | 3.21e-09 | 56 |
regional part of cerebral cortex | 1.03e-08 | 22 |
regional part of nervous system | 2.03e-08 | 53 |
regional part of brain | 2.03e-08 | 53 |
neocortex | 6.41e-08 | 20 |
cerebral cortex | 1.25e-07 | 25 |
pallium | 1.25e-07 | 25 |
regional part of forebrain | 1.49e-07 | 41 |
forebrain | 1.49e-07 | 41 |
anterior neural tube | 1.49e-07 | 41 |
future forebrain | 1.49e-07 | 41 |
organ system subdivision | 1.77e-07 | 223 |
cerebral hemisphere | 1.93e-07 | 32 |
brain grey matter | 4.05e-07 | 34 |
gray matter | 4.05e-07 | 34 |
blood | 4.49e-07 | 15 |
haemolymphatic fluid | 4.49e-07 | 15 |
organism substance | 4.49e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.45e-15 | 235 |
disease of cellular proliferation | 1.80e-14 | 239 |
cell type cancer | 1.21e-11 | 143 |
carcinoma | 6.94e-11 | 106 |
organ system cancer | 8.43e-07 | 137 |